RNA–Protein interactions for RNA: ENST00000559327.1

IGDCC4-204, Transcript of immunoglobulin superfamily DCC subclass member 4, humanhuman

TSL 1 (best)

Gene IGDCC4, Length 5,544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGDCC4-204ENST00000559327 DCAF8L2P0C7V8 631 aa34.64■■■■□ 3.14
IGDCC4-204ENST00000559327 NISCHQ9Y2I1 1504 aa34■■■■□ 3.03
IGDCC4-204ENST00000559327 SUPT5HO00267 1087 aaKnown RBP32.63■■■□□ 2.81
IGDCC4-204ENST00000559327 SHROOM4Q9ULL8 1493 aa32.27■■■□□ 2.76
IGDCC4-204ENST00000559327 EHMT2Q96KQ7 1210 aa31.29■■■□□ 2.6
IGDCC4-204ENST00000559327 APLP2Q06481 763 aa31.06■■■□□ 2.56
IGDCC4-204ENST00000559327 FAM9AQ8IZU1 332 aaPredicted RBP30.86■■■□□ 2.53
IGDCC4-204ENST00000559327 TRIM41Q8WV44 630 aa30.41■■■□□ 2.46
IGDCC4-204ENST00000559327 TTBK1Q5TCY1 1321 aaPredicted RBP30.2■■■□□ 2.43
IGDCC4-204ENST00000559327 PELP1Q8IZL8 1130 aaKnown RBP30.17■■■□□ 2.42
IGDCC4-204ENST00000559327 RANGAP1P46060 587 aaPredicted RBP30.16■■■□□ 2.42
IGDCC4-204ENST00000559327 UBTFP17480 764 aaKnown RBP30■■■□□ 2.39
IGDCC4-204ENST00000559327 ATP1B4Q9UN42 357 aaPredicted RBP30■■■□□ 2.39
IGDCC4-204ENST00000559327 PCGF6Q9BYE7 350 aa29.99■■■□□ 2.39
IGDCC4-204ENST00000559327 ZEB1P37275 1124 aaPredicted RBP29.73■■■□□ 2.35
IGDCC4-204ENST00000559327 CCER1Q8TC90 406 aaPredicted RBP29.66■■■□□ 2.34
IGDCC4-204ENST00000559327 ABCC9O60706 1549 aa29.34■■■□□ 2.29
IGDCC4-204ENST00000559327 CENPBP07199 599 aaPredicted RBP29.28■■■□□ 2.28
IGDCC4-204ENST00000559327 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.1■■■□□ 2.25
IGDCC4-204ENST00000559327 HNRNPUL2Q1KMD3 747 aaKnown RBP29.1■■■□□ 2.25
IGDCC4-204ENST00000559327 PPARGC1BQ86YN6 1023 aaKnown RBP29.09■■■□□ 2.25
IGDCC4-204ENST00000559327 TRIM26Q12899 539 aaPredicted RBP29.04■■■□□ 2.24
IGDCC4-204ENST00000559327 PABPN1Q86U42 306 aaKnown RBP eCLIP29.03■■■□□ 2.24
IGDCC4-204ENST00000559327 CHIC1Q5VXU3 224 aa29.02■■■□□ 2.24
IGDCC4-204ENST00000559327 MYT1LQ9UL68 1186 aa28.96■■■□□ 2.23
IGDCC4-204ENST00000559327 ITGAEP38570 1179 aa28.84■■■□□ 2.21
IGDCC4-204ENST00000559327 LOC105371045A0A1W2PR82 267 aa28.81■■■□□ 2.2
IGDCC4-204ENST00000559327 NEFLP07196 543 aa28.77■■■□□ 2.2
IGDCC4-204ENST00000559327 ERICH6Q7L0X2 663 aa28.73■■■□□ 2.19
IGDCC4-204ENST00000559327 YTHDC1Q96MU7 727 aaKnown RBP28.6■■■□□ 2.17
IGDCC4-204ENST00000559327 POLR3GLQ9BT43 218 aa28.44■■■□□ 2.14
IGDCC4-204ENST00000559327 HRCP23327 699 aa28.34■■■□□ 2.13
IGDCC4-204ENST00000559327 FAM50AQ14320 339 aaKnown RBP28.31■■■□□ 2.12
IGDCC4-204ENST00000559327 FBLN2P98095 1184 aa28.18■■■□□ 2.1
IGDCC4-204ENST00000559327 SCRIBQ14160 1630 aa28.15■■■□□ 2.1
IGDCC4-204ENST00000559327 ZCCHC6Q5VYS8 1495 aaKnown RBP28.14■■■□□ 2.1
IGDCC4-204ENST00000559327 TRIM52Q96A61 297 aa28.12■■■□□ 2.09
IGDCC4-204ENST00000559327 CCDC180Q9P1Z9 1646 aa28.12■■■□□ 2.09
IGDCC4-204ENST00000559327 SLC4A1APQ9BWU0 796 aaKnown RBP28.04■■■□□ 2.08
IGDCC4-204ENST00000559327 CNGB1Q14028 1251 aaPredicted RBP27.99■■■□□ 2.07
IGDCC4-204ENST00000559327 CSRNP3Q8WYN3 585 aa27.95■■■□□ 2.07
IGDCC4-204ENST00000559327 NEUROD1Q13562 356 aa27.84■■■□□ 2.05
IGDCC4-204ENST00000559327 DAXXQ9UER7 740 aaPredicted RBP27.83■■■□□ 2.05
IGDCC4-204ENST00000559327 P3H3Q8IVL6 736 aa27.78■■■□□ 2.04
IGDCC4-204ENST00000559327 DIEXFQ68CQ4 756 aaKnown RBP27.75■■■□□ 2.03
IGDCC4-204ENST00000559327 CDK11AQ9UQ88 783 aaPredicted RBP27.72■■■□□ 2.03
IGDCC4-204ENST00000559327 RB1CC1Q8TDY2 1594 aa27.69■■■□□ 2.02
IGDCC4-204ENST00000559327 ZNF326Q5BKZ1 582 aaKnown RBP27.66■■■□□ 2.02
IGDCC4-204ENST00000559327 ARID3CA6NKF2 412 aa27.64■■■□□ 2.02
IGDCC4-204ENST00000559327 ZNF777Q9ULD5 760 aaPredicted RBP27.54■■■□□ 2
IGDCC4-204ENST00000559327 ANP32CO43423 234 aa27.49■■□□□ 1.99
IGDCC4-204ENST00000559327 NACADO15069 1562 aa27.4■■□□□ 1.98
IGDCC4-204ENST00000559327 CLSPNQ9HAW4 1339 aa27.39■■□□□ 1.98
IGDCC4-204ENST00000559327 NPM1P06748 294 aaKnown RBP eCLIP27.38■■□□□ 1.97
IGDCC4-204ENST00000559327 BCANQ96GW7 911 aa27.38■■□□□ 1.97
IGDCC4-204ENST00000559327 MYT1Q01538 1121 aa27.37■■□□□ 1.97
IGDCC4-204ENST00000559327 ESF1Q9H501 851 aaKnown RBP27.31■■□□□ 1.96
IGDCC4-204ENST00000559327 ZNF316A6NFI3 1004 aaPredicted RBP27.3■■□□□ 1.96
IGDCC4-204ENST00000559327 NEFMP07197 916 aa27.2■■□□□ 1.95
IGDCC4-204ENST00000559327 CHMP7Q8WUX9 453 aaPredicted RBP27.18■■□□□ 1.94
IGDCC4-204ENST00000559327 ZBTB47Q9UFB7 747 aaPredicted RBP27.12■■□□□ 1.93
IGDCC4-204ENST00000559327 RSF1Q96T23 1441 aaPredicted RBP27.12■■□□□ 1.93
IGDCC4-204ENST00000559327 TONSLQ96HA7 1378 aa27.11■■□□□ 1.93
IGDCC4-204ENST00000559327 DCAF1Q9Y4B6 1507 aa27.1■■□□□ 1.93
IGDCC4-204ENST00000559327 BAZ1BQ9UIG0 1483 aaKnown RBP27.1■■□□□ 1.93
IGDCC4-204ENST00000559327 STAG3Q9UJ98 1225 aa27.09■■□□□ 1.93
IGDCC4-204ENST00000559327 CHGAP10645 457 aaKnown RBP27.04■■□□□ 1.92
IGDCC4-204ENST00000559327 EEA1Q15075 1411 aa27.03■■□□□ 1.92
IGDCC4-204ENST00000559327 MTUS2Q5JR59 1369 aa27.03■■□□□ 1.92
IGDCC4-204ENST00000559327 CANXP27824 592 aaKnown RBP27.03■■□□□ 1.92
IGDCC4-204ENST00000559327 SLC24A1O60721 1099 aa27■■□□□ 1.91
IGDCC4-204ENST00000559327 TSPY4P0CV99 314 aa26.99■■□□□ 1.91
IGDCC4-204ENST00000559327 TSPY10P0CW01 314 aa26.99■■□□□ 1.91
IGDCC4-204ENST00000559327 CLIP1P30622 1438 aa26.98■■□□□ 1.91
IGDCC4-204ENST00000559327 RTL5Q5HYW3 569 aaPredicted RBP26.98■■□□□ 1.91
IGDCC4-204ENST00000559327 CHIC2Q9UKJ5 165 aa26.94■■□□□ 1.9
IGDCC4-204ENST00000559327 WRNQ14191 1432 aaPredicted RBP eCLIP26.92■■□□□ 1.9
IGDCC4-204ENST00000559327 GOLGA3Q08378 1498 aa26.9■■□□□ 1.9
IGDCC4-204ENST00000559327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.89■■□□□ 1.9
IGDCC4-204ENST00000559327 BAZ1AQ9NRL2 1556 aaPredicted RBP26.86■■□□□ 1.89
IGDCC4-204ENST00000559327 KIF27Q86VH2 1401 aa26.82■■□□□ 1.88
IGDCC4-204ENST00000559327 GTF3C3Q9Y5Q9 886 aa26.81■■□□□ 1.88
IGDCC4-204ENST00000559327 PLPPR3Q6T4P5 718 aa26.79■■□□□ 1.88
IGDCC4-204ENST00000559327 PLEKHD1A6NEE1 506 aa26.76■■□□□ 1.87
IGDCC4-204ENST00000559327 ERCC6Q03468 1493 aa26.72■■□□□ 1.87
IGDCC4-204ENST00000559327 ACIN1Q9UKV3 1341 aaKnown RBP26.7■■□□□ 1.86
IGDCC4-204ENST00000559327 CEP162Q5TB80 1403 aa26.7■■□□□ 1.86
IGDCC4-204ENST00000559327 CEP164Q9UPV0 1460 aa26.66■■□□□ 1.86
IGDCC4-204ENST00000559327 KCNH8Q96L42 1107 aa26.65■■□□□ 1.86
IGDCC4-204ENST00000559327 BCL11AQ9H165 835 aa26.62■■□□□ 1.85
IGDCC4-204ENST00000559327 DDX10Q13206 875 aaKnown RBP26.61■■□□□ 1.85
IGDCC4-204ENST00000559327 KDM2AQ9Y2K7 1162 aa26.6■■□□□ 1.85
IGDCC4-204ENST00000559327 TNIKQ9UKE5 1360 aa26.58■■□□□ 1.85
IGDCC4-204ENST00000559327 RRP7BPQ9NSQ0 103 aa26.57■■□□□ 1.84
IGDCC4-204ENST00000559327 CECR2Q9BXF3 1484 aa26.54■■□□□ 1.84
IGDCC4-204ENST00000559327 HNRNPUQ00839 825 aaKnown RBP eCLIP26.51■■□□□ 1.83
IGDCC4-204ENST00000559327 FAM9BQ8IZU0 186 aa26.51■■□□□ 1.83
IGDCC4-204ENST00000559327 TMC1Q8TDI8 760 aa26.5■■□□□ 1.83
IGDCC4-204ENST00000559327 CFDP1Q9UEE9 299 aaPredicted RBP26.5■■□□□ 1.83
IGDCC4-204ENST00000559327 WDR43Q15061 677 aaKnown RBP eCLIP26.45■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms