RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 SYNE2Q8WXH0 6885 aaKnown RBP3.04□□□□□ -1.92
SPTB-208ENST00000556626 KRTAP4-9Q9BYQ8 210 aa3.03□□□□□ -1.92
SPTB-208ENST00000556626 KRTAP19-6Q3LI70 58 aa3.02□□□□□ -1.93
SPTB-208ENST00000556626 KRTAP19-7Q3SYF9 63 aa2.99□□□□□ -1.93
SPTB-208ENST00000556626 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
SPTB-208ENST00000556626 LCE5AQ5TCM9 118 aa2.92□□□□□ -1.94
SPTB-208ENST00000556626 HYDINQ4G0P3 5121 aa2.91□□□□□ -1.94
SPTB-208ENST00000556626 KRTAP9-6A8MVA2 160 aa2.88□□□□□ -1.95
SPTB-208ENST00000556626 KRTAP9-2Q9BYQ4 174 aa2.86□□□□□ -1.95
SPTB-208ENST00000556626 KRTAP6-1Q3LI64 71 aa2.84□□□□□ -1.96
SPTB-208ENST00000556626 PCLOQ9Y6V0 5065 aa2.83□□□□□ -1.96
SPTB-208ENST00000556626 KRTAP9-7A8MTY7 169 aa2.82□□□□□ -1.96
SPTB-208ENST00000556626 BIRC6Q9NR09 4857 aa2.81□□□□□ -1.96
SPTB-208ENST00000556626 KRTAP9-4Q9BYQ2 154 aa2.79□□□□□ -1.96
SPTB-208ENST00000556626 KRTAP2-2Q9BYT5 123 aa2.78□□□□□ -1.96
SPTB-208ENST00000556626 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
SPTB-208ENST00000556626 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
SPTB-208ENST00000556626 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
SPTB-208ENST00000556626 LCE1AQ5T7P2 110 aa2.76□□□□□ -1.97
SPTB-208ENST00000556626 RYR2Q92736 4967 aa2.74□□□□□ -1.97
SPTB-208ENST00000556626 KRTAP9-6A0A140TA67 174 aa2.71□□□□□ -1.98
SPTB-208ENST00000556626 HMCN2Q8NDA2 5059 aa2.7□□□□□ -1.98
SPTB-208ENST00000556626 LCE4AQ5TA78 99 aa2.68□□□□□ -1.98
SPTB-208ENST00000556626 HERC2O95714 4834 aa2.66□□□□□ -1.98
SPTB-208ENST00000556626 SYNE1Q8NF91 8797 aaKnown RBP2.64□□□□□ -1.99
SPTB-208ENST00000556626 LCE2AQ5TA79 106 aaPredicted RBP2.63□□□□□ -1.99
SPTB-208ENST00000556626 KRTAP20-1Q3LI63 56 aa2.63□□□□□ -1.99
SPTB-208ENST00000556626 KIAA1109Q2LD37 5005 aa2.59□□□□□ -1.99
SPTB-208ENST00000556626 HERC1Q15751 4861 aa2.59□□□□□ -1.99
SPTB-208ENST00000556626 KRTAP6-3Q3LI67 103 aa2.51□□□□□ -2.01
SPTB-208ENST00000556626 FSIP2Q5CZC0 6907 aa2.48□□□□□ -2.01
SPTB-208ENST00000556626 MUC2Q02817 5179 aa2.47□□□□□ -2.01
SPTB-208ENST00000556626 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
SPTB-208ENST00000556626 KMT2DO14686 5537 aa2.42□□□□□ -2.02
SPTB-208ENST00000556626 KRTAP9-9Q9BYP9 154 aa2.41□□□□□ -2.02
SPTB-208ENST00000556626 UBR4Q5T4S7 5183 aa2.37□□□□□ -2.03
SPTB-208ENST00000556626 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.36□□□□□ -2.03
SPTB-208ENST00000556626 EPPK1P58107 5090 aaKnown RBP2.36□□□□□ -2.03
SPTB-208ENST00000556626 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.04
SPTB-208ENST00000556626 OBSCNQ5VST9 7968 aa2.33□□□□□ -2.04
SPTB-208ENST00000556626 ABCA13Q86UQ4 5058 aa2.32□□□□□ -2.04
SPTB-208ENST00000556626 RNF213Q63HN8 5207 aa2.3□□□□□ -2.04
SPTB-208ENST00000556626 DSTQ03001 7570 aaKnown RBP2.26□□□□□ -2.05
SPTB-208ENST00000556626 FAT4Q6V0I7 4981 aa2.26□□□□□ -2.05
SPTB-208ENST00000556626 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
SPTB-208ENST00000556626 KRTAP4-6Q9BYQ5 205 aa2.19□□□□□ -2.06
SPTB-208ENST00000556626 FCGBPQ9Y6R7 5405 aaPredicted RBP2.18□□□□□ -2.06
SPTB-208ENST00000556626 KRTAP5-9P26371 169 aa2.16□□□□□ -2.06
SPTB-208ENST00000556626 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.06
SPTB-208ENST00000556626 KRTAP5-4Q6L8H1 288 aa2.01□□□□□ -2.09
SPTB-208ENST00000556626 KRTAP4-12Q9BQ66 201 aa2.01□□□□□ -2.09
SPTB-208ENST00000556626 KRTAP4-2Q9BYR5 136 aa2.01□□□□□ -2.09
SPTB-208ENST00000556626 MACF1Q9UPN3 7388 aaKnown RBP1.98□□□□□ -2.09
SPTB-208ENST00000556626 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
SPTB-208ENST00000556626 USH2AO75445 5202 aa1.96□□□□□ -2.1
SPTB-208ENST00000556626 NEBP20929 6669 aa1.95□□□□□ -2.1
SPTB-208ENST00000556626 MDN1Q9NU22 5596 aa1.91□□□□□ -2.1
SPTB-208ENST00000556626 SSPOA2VEC9 5147 aa1.91□□□□□ -2.1
SPTB-208ENST00000556626 MUC12Q9UKN1 5478 aa1.88□□□□□ -2.11
SPTB-208ENST00000556626 GPR98Q8WXG9 6306 aa1.79□□□□□ -2.12
SPTB-208ENST00000556626 KRTAP5-10Q6L8G5 202 aa1.73□□□□□ -2.13
SPTB-208ENST00000556626 KRTAP5-3Q6L8H2 238 aa1.73□□□□□ -2.13
SPTB-208ENST00000556626 MUC5ACP98088 5654 aa1.63□□□□□ -2.15
SPTB-208ENST00000556626 AHNAK2Q8IVF2 5795 aa1.6□□□□□ -2.15
SPTB-208ENST00000556626 KRTAP5-2Q701N4 177 aa1.6□□□□□ -2.15
SPTB-208ENST00000556626 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
SPTB-208ENST00000556626 MUC5BQ9HC84 5762 aaPredicted RBP1.53□□□□□ -2.16
SPTB-208ENST00000556626 HMCN1Q96RW7 5635 aa1.52□□□□□ -2.17
SPTB-208ENST00000556626 KRTAP5-8O75690 187 aa1.49□□□□□ -2.17
SPTB-208ENST00000556626 PHGR1C9JFL3 82 aa1.48□□□□□ -2.17
SPTB-208ENST00000556626 KRTAP5-1Q6L8H4 278 aa1.47□□□□□ -2.17
SPTB-208ENST00000556626 KRTAP5-11Q6L8G4 156 aa1.45□□□□□ -2.18
SPTB-208ENST00000556626 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
SPTB-208ENST00000556626 AHNAKQ09666 5890 aaKnown RBP1.36□□□□□ -2.19
SPTB-208ENST00000556626 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.27□□□□□ -2.21
SPTB-208ENST00000556626 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
SPTB-208ENST00000556626 KRTAP5-7Q6L8G8 165 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 12.9 ms