RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 KRTAP6-3Q3LI67 103 aa2.94□□□□□ -1.94
PPFIA2-216ENST00000549396 ABCA13Q86UQ4 5058 aa2.9□□□□□ -1.94
PPFIA2-216ENST00000549396 MT1AP04731 61 aa2.86□□□□□ -1.95
PPFIA2-216ENST00000549396 KRTAP19-7Q3SYF9 63 aa2.83□□□□□ -1.96
PPFIA2-216ENST00000549396 KRTAP20-1Q3LI63 56 aa2.83□□□□□ -1.96
PPFIA2-216ENST00000549396 KRTAP2-3P0C7H8 128 aa2.81□□□□□ -1.96
PPFIA2-216ENST00000549396 LCE4AQ5TA78 99 aa2.81□□□□□ -1.96
PPFIA2-216ENST00000549396 KRTAP2-4Q9BYR9 128 aa2.81□□□□□ -1.96
PPFIA2-216ENST00000549396 KRTAP9-7A8MTY7 169 aa2.77□□□□□ -1.97
PPFIA2-216ENST00000549396 EPPK1P58107 5090 aaKnown RBP2.76□□□□□ -1.97
PPFIA2-216ENST00000549396 RNF213Q63HN8 5207 aa2.76□□□□□ -1.97
PPFIA2-216ENST00000549396 LPAP08519 4548 aa2.74□□□□□ -1.97
PPFIA2-216ENST00000549396 KRTAP4-7Q9BYR0 210 aa2.73□□□□□ -1.97
PPFIA2-216ENST00000549396 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.71□□□□□ -1.98
PPFIA2-216ENST00000549396 MT4P47944 62 aa2.71□□□□□ -1.98
PPFIA2-216ENST00000549396 FAT4Q6V0I7 4981 aa2.71□□□□□ -1.98
PPFIA2-216ENST00000549396 LCE5AQ5TCM9 118 aa2.7□□□□□ -1.98
PPFIA2-216ENST00000549396 KRTAP2-2Q9BYT5 123 aa2.7□□□□□ -1.98
PPFIA2-216ENST00000549396 KRTAP2-1Q9BYU5 128 aa2.7□□□□□ -1.98
PPFIA2-216ENST00000549396 HMCN2Q8NDA2 5059 aa2.68□□□□□ -1.98
PPFIA2-216ENST00000549396 KRTAP9-4Q9BYQ2 154 aa2.62□□□□□ -1.99
PPFIA2-216ENST00000549396 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -2
PPFIA2-216ENST00000549396 LOC100996750A0A140TA64 210 aa2.59□□□□□ -2
PPFIA2-216ENST00000549396 KRTAP5-9P26371 169 aa2.55□□□□□ -2
PPFIA2-216ENST00000549396 LCE1DQ5T752 114 aa2.55□□□□□ -2
PPFIA2-216ENST00000549396 UBR4Q5T4S7 5183 aa2.53□□□□□ -2
PPFIA2-216ENST00000549396 PRM1P04553 51 aa2.52□□□□□ -2.01
PPFIA2-216ENST00000549396 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
PPFIA2-216ENST00000549396 KRTAP6-1Q3LI64 71 aa2.49□□□□□ -2.01
PPFIA2-216ENST00000549396 KRTAP6-2Q3LI66 62 aa2.45□□□□□ -2.02
PPFIA2-216ENST00000549396 KRTAP9-6A8MVA2 160 aa2.38□□□□□ -2.03
PPFIA2-216ENST00000549396 SYNE2Q8WXH0 6885 aaKnown RBP2.33□□□□□ -2.04
PPFIA2-216ENST00000549396 KRTAP4-9Q9BYQ8 210 aa2.3□□□□□ -2.04
PPFIA2-216ENST00000549396 SSPOA2VEC9 5147 aa2.3□□□□□ -2.04
PPFIA2-216ENST00000549396 FSIP2Q5CZC0 6907 aa2.29□□□□□ -2.04
PPFIA2-216ENST00000549396 KRTAP9-9Q9BYP9 154 aa2.28□□□□□ -2.04
PPFIA2-216ENST00000549396 NEBP20929 6669 aa2.25□□□□□ -2.05
PPFIA2-216ENST00000549396 KRTAP5-4Q6L8H1 288 aa2.24□□□□□ -2.05
PPFIA2-216ENST00000549396 USH2AO75445 5202 aa2.23□□□□□ -2.05
PPFIA2-216ENST00000549396 KRTAP20-2Q3LI61 65 aa2.22□□□□□ -2.05
PPFIA2-216ENST00000549396 MUC2Q02817 5179 aa2.2□□□□□ -2.06
PPFIA2-216ENST00000549396 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
PPFIA2-216ENST00000549396 LCE1EQ5T753 118 aa2.15□□□□□ -2.07
PPFIA2-216ENST00000549396 LCE1FQ5T754 118 aa2.15□□□□□ -2.07
PPFIA2-216ENST00000549396 SYNE1Q8NF91 8797 aaKnown RBP2.08□□□□□ -2.08
PPFIA2-216ENST00000549396 KRTAP5-5Q701N2 237 aaPredicted RBP2.06□□□□□ -2.08
PPFIA2-216ENST00000549396 KRTAP4-6Q9BYQ5 205 aa2.06□□□□□ -2.08
PPFIA2-216ENST00000549396 OBSCNQ5VST9 7968 aa2.05□□□□□ -2.08
PPFIA2-216ENST00000549396 FCGBPQ9Y6R7 5405 aaPredicted RBP2.02□□□□□ -2.09
PPFIA2-216ENST00000549396 KMT2DO14686 5537 aa2□□□□□ -2.09
PPFIA2-216ENST00000549396 KRTAP4-11Q9BYQ6 195 aa1.98□□□□□ -2.09
PPFIA2-216ENST00000549396 MACF1Q9UPN3 7388 aaKnown RBP1.95□□□□□ -2.1
PPFIA2-216ENST00000549396 KRTAP5-3Q6L8H2 238 aa1.94□□□□□ -2.1
PPFIA2-216ENST00000549396 MDN1Q9NU22 5596 aa1.9□□□□□ -2.11
PPFIA2-216ENST00000549396 GPR98Q8WXG9 6306 aa1.84□□□□□ -2.12
PPFIA2-216ENST00000549396 MUC12Q9UKN1 5478 aa1.82□□□□□ -2.12
PPFIA2-216ENST00000549396 DSTQ03001 7570 aaKnown RBP1.8□□□□□ -2.12
PPFIA2-216ENST00000549396 KRTAP5-2Q701N4 177 aa1.8□□□□□ -2.12
PPFIA2-216ENST00000549396 AHNAK2Q8IVF2 5795 aa1.73□□□□□ -2.13
PPFIA2-216ENST00000549396 MUC5ACP98088 5654 aa1.72□□□□□ -2.13
PPFIA2-216ENST00000549396 HMCN1Q96RW7 5635 aa1.67□□□□□ -2.14
PPFIA2-216ENST00000549396 KRTAP5-8O75690 187 aa1.67□□□□□ -2.14
PPFIA2-216ENST00000549396 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
PPFIA2-216ENST00000549396 KRTAP4-12Q9BQ66 201 aa1.65□□□□□ -2.15
PPFIA2-216ENST00000549396 KRTAP4-2Q9BYR5 136 aa1.65□□□□□ -2.15
PPFIA2-216ENST00000549396 KRTAP4-4Q9BYR3 166 aa1.59□□□□□ -2.15
PPFIA2-216ENST00000549396 KRTAP5-11Q6L8G4 156 aa1.59□□□□□ -2.16
PPFIA2-216ENST00000549396 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.54□□□□□ -2.16
PPFIA2-216ENST00000549396 KRTAP5-10Q6L8G5 202 aa1.54□□□□□ -2.16
PPFIA2-216ENST00000549396 KRTAP5-1Q6L8H4 278 aa1.47□□□□□ -2.17
PPFIA2-216ENST00000549396 KRTAP5-7Q6L8G8 165 aa1.46□□□□□ -2.18
PPFIA2-216ENST00000549396 MUC5BQ9HC84 5762 aaPredicted RBP1.45□□□□□ -2.18
PPFIA2-216ENST00000549396 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
PPFIA2-216ENST00000549396 PHGR1C9JFL3 82 aa1.4□□□□□ -2.19
PPFIA2-216ENST00000549396 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
PPFIA2-216ENST00000549396 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
PPFIA2-216ENST00000549396 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 148.7 ms