RNA–Protein interactions for RNA: ENST00000544596.5

ABCA13-207, Transcript of ATP binding cassette subfamily A member 13, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene ABCA13, Length 7,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-207ENST00000544596 EPPK1P58107 5090 aaKnown RBP2.46□□□□□ -2.02
ABCA13-207ENST00000544596 KRTAP9-2Q9BYQ4 174 aa2.45□□□□□ -2.02
ABCA13-207ENST00000544596 MT1MQ8N339 61 aa2.44□□□□□ -2.02
ABCA13-207ENST00000544596 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
ABCA13-207ENST00000544596 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
ABCA13-207ENST00000544596 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
ABCA13-207ENST00000544596 LCE1AQ5T7P2 110 aa2.44□□□□□ -2.02
ABCA13-207ENST00000544596 KRTAP4-3Q9BYR4 195 aa2.44□□□□□ -2.02
ABCA13-207ENST00000544596 KRTAP19-2Q3LHN2 52 aa2.43□□□□□ -2.02
ABCA13-207ENST00000544596 KRTAP19-6Q3LI70 58 aa2.41□□□□□ -2.02
ABCA13-207ENST00000544596 HERC1Q15751 4861 aa2.4□□□□□ -2.03
ABCA13-207ENST00000544596 KRTAP20-1Q3LI63 56 aa2.4□□□□□ -2.03
ABCA13-207ENST00000544596 PCLOQ9Y6V0 5065 aa2.37□□□□□ -2.03
ABCA13-207ENST00000544596 KRTAP4-9Q9BYQ8 210 aa2.37□□□□□ -2.03
ABCA13-207ENST00000544596 KRTAP9-6A0A140TA67 174 aa2.36□□□□□ -2.03
ABCA13-207ENST00000544596 SYNE1Q8NF91 8797 aaKnown RBP2.34□□□□□ -2.03
ABCA13-207ENST00000544596 LCE4AQ5TA78 99 aa2.32□□□□□ -2.04
ABCA13-207ENST00000544596 LCE2AQ5TA79 106 aaPredicted RBP2.31□□□□□ -2.04
ABCA13-207ENST00000544596 ABCA13Q86UQ4 5058 aa2.29□□□□□ -2.04
ABCA13-207ENST00000544596 UBR4Q5T4S7 5183 aa2.29□□□□□ -2.04
ABCA13-207ENST00000544596 SYNE2Q8WXH0 6885 aaKnown RBP2.27□□□□□ -2.05
ABCA13-207ENST00000544596 MT1AP04731 61 aa2.27□□□□□ -2.05
ABCA13-207ENST00000544596 KRTAP9-7A8MTY7 169 aa2.26□□□□□ -2.05
ABCA13-207ENST00000544596 KRTAP2-3P0C7H8 128 aa2.26□□□□□ -2.05
ABCA13-207ENST00000544596 KRTAP2-4Q9BYR9 128 aa2.26□□□□□ -2.05
ABCA13-207ENST00000544596 KRTAP2-1Q9BYU5 128 aa2.26□□□□□ -2.05
ABCA13-207ENST00000544596 KRTAP6-2Q3LI66 62 aa2.21□□□□□ -2.05
ABCA13-207ENST00000544596 FAT4Q6V0I7 4981 aa2.19□□□□□ -2.06
ABCA13-207ENST00000544596 HMCN2Q8NDA2 5059 aa2.17□□□□□ -2.06
ABCA13-207ENST00000544596 MUC2Q02817 5179 aa2.17□□□□□ -2.06
ABCA13-207ENST00000544596 FSIP2Q5CZC0 6907 aa2.15□□□□□ -2.07
ABCA13-207ENST00000544596 KRTAP6-1Q3LI64 71 aa2.13□□□□□ -2.07
ABCA13-207ENST00000544596 OBSCNQ5VST9 7968 aa2.13□□□□□ -2.07
ABCA13-207ENST00000544596 RNF213Q63HN8 5207 aa2.12□□□□□ -2.07
ABCA13-207ENST00000544596 KRTAP19-7Q3SYF9 63 aa2.12□□□□□ -2.07
ABCA13-207ENST00000544596 KRTAP2-2Q9BYT5 123 aa2.11□□□□□ -2.07
ABCA13-207ENST00000544596 KRTAP6-3Q3LI67 103 aa2.11□□□□□ -2.07
ABCA13-207ENST00000544596 KRTAP9-4Q9BYQ2 154 aa2.11□□□□□ -2.07
ABCA13-207ENST00000544596 KRTAP9-9Q9BYP9 154 aa2.08□□□□□ -2.08
ABCA13-207ENST00000544596 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.05□□□□□ -2.08
ABCA13-207ENST00000544596 KRTAP20-2Q3LI61 65 aa1.97□□□□□ -2.09
ABCA13-207ENST00000544596 GPR98Q8WXG9 6306 aa1.95□□□□□ -2.1
ABCA13-207ENST00000544596 KRTAP4-11Q9BYQ6 195 aa1.93□□□□□ -2.1
ABCA13-207ENST00000544596 MACF1Q9UPN3 7388 aaKnown RBP1.91□□□□□ -2.1
ABCA13-207ENST00000544596 KRTAP9-6A8MVA2 160 aa1.91□□□□□ -2.1
ABCA13-207ENST00000544596 DSTQ03001 7570 aaKnown RBP1.86□□□□□ -2.11
ABCA13-207ENST00000544596 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
ABCA13-207ENST00000544596 KRTAP4-12Q9BQ66 201 aa1.84□□□□□ -2.12
ABCA13-207ENST00000544596 KRTAP4-6Q9BYQ5 205 aa1.84□□□□□ -2.12
ABCA13-207ENST00000544596 KRTAP4-2Q9BYR5 136 aa1.84□□□□□ -2.12
ABCA13-207ENST00000544596 KMT2DO14686 5537 aa1.83□□□□□ -2.12
ABCA13-207ENST00000544596 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
ABCA13-207ENST00000544596 NEBP20929 6669 aa1.82□□□□□ -2.12
ABCA13-207ENST00000544596 KRTAP5-9P26371 169 aa1.8□□□□□ -2.12
ABCA13-207ENST00000544596 USH2AO75445 5202 aa1.79□□□□□ -2.12
ABCA13-207ENST00000544596 FCGBPQ9Y6R7 5405 aaPredicted RBP1.75□□□□□ -2.13
ABCA13-207ENST00000544596 MDN1Q9NU22 5596 aa1.74□□□□□ -2.13
ABCA13-207ENST00000544596 SSPOA2VEC9 5147 aa1.72□□□□□ -2.13
ABCA13-207ENST00000544596 MUC12Q9UKN1 5478 aa1.6□□□□□ -2.15
ABCA13-207ENST00000544596 KRTAP5-4Q6L8H1 288 aa1.53□□□□□ -2.16
ABCA13-207ENST00000544596 KRTAP5-5Q701N2 237 aaPredicted RBP1.48□□□□□ -2.17
ABCA13-207ENST00000544596 AHNAK2Q8IVF2 5795 aa1.46□□□□□ -2.18
ABCA13-207ENST00000544596 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
ABCA13-207ENST00000544596 HMCN1Q96RW7 5635 aa1.38□□□□□ -2.19
ABCA13-207ENST00000544596 AHNAKQ09666 5890 aaKnown RBP1.36□□□□□ -2.19
ABCA13-207ENST00000544596 KRTAP5-3Q6L8H2 238 aa1.35□□□□□ -2.19
ABCA13-207ENST00000544596 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.2
ABCA13-207ENST00000544596 MUC5ACP98088 5654 aa1.33□□□□□ -2.2
ABCA13-207ENST00000544596 KRTAP5-8O75690 187 aa1.26□□□□□ -2.21
ABCA13-207ENST00000544596 KRTAP5-2Q701N4 177 aa1.25□□□□□ -2.21
ABCA13-207ENST00000544596 KRTAP5-7Q6L8G8 165 aa1.16□□□□□ -2.22
ABCA13-207ENST00000544596 KRTAP5-10Q6L8G5 202 aa1.13□□□□□ -2.23
ABCA13-207ENST00000544596 KRTAP5-1Q6L8H4 278 aa1.1□□□□□ -2.23
ABCA13-207ENST00000544596 KRTAP5-11Q6L8G4 156 aa1.06□□□□□ -2.24
ABCA13-207ENST00000544596 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
ABCA13-207ENST00000544596 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.05□□□□□ -2.24
ABCA13-207ENST00000544596 KRTAP21-2Q3LI59 83 aa0.99□□□□□ -2.25
ABCA13-207ENST00000544596 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 26.1 ms