RNA–Protein interactions for RNA: ENST00000544041.5

MAP3K4-215, Transcript of mitogen-activated protein kinase kinase kinase 4, humanhuman

TSL 1 (best)

Gene MAP3K4, Length 5,444 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP3K4-215ENST00000544041 KRTAP19-7Q3SYF9 63 aa4.2□□□□□ -1.74
MAP3K4-215ENST00000544041 SYNE1Q8NF91 8797 aaKnown RBP4.18□□□□□ -1.74
MAP3K4-215ENST00000544041 PRM1P04553 51 aa4.16□□□□□ -1.74
MAP3K4-215ENST00000544041 LOC100996750A0A140TA64 210 aa4.15□□□□□ -1.75
MAP3K4-215ENST00000544041 HMCN2Q8NDA2 5059 aa4.13□□□□□ -1.75
MAP3K4-215ENST00000544041 UBR4Q5T4S7 5183 aa4.09□□□□□ -1.75
MAP3K4-215ENST00000544041 KRTAP19-6Q3LI70 58 aa4.09□□□□□ -1.75
MAP3K4-215ENST00000544041 KRTAP4-3Q9BYR4 195 aa4.09□□□□□ -1.75
MAP3K4-215ENST00000544041 EPPK1P58107 5090 aaKnown RBP4.08□□□□□ -1.76
MAP3K4-215ENST00000544041 MT3P25713 68 aa4.06□□□□□ -1.76
MAP3K4-215ENST00000544041 FAT4Q6V0I7 4981 aa4.05□□□□□ -1.76
MAP3K4-215ENST00000544041 KRTAP9-6A8MVA2 160 aa4.04□□□□□ -1.76
MAP3K4-215ENST00000544041 RNF213Q63HN8 5207 aa4.03□□□□□ -1.76
MAP3K4-215ENST00000544041 MT1AP04731 61 aa3.98□□□□□ -1.77
MAP3K4-215ENST00000544041 LCE2AQ5TA79 106 aaPredicted RBP3.92□□□□□ -1.78
MAP3K4-215ENST00000544041 KRTAP4-9Q9BYQ8 210 aa3.9□□□□□ -1.78
MAP3K4-215ENST00000544041 LCE2DQ5TA82 110 aaPredicted RBP3.86□□□□□ -1.79
MAP3K4-215ENST00000544041 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
MAP3K4-215ENST00000544041 MT4P47944 62 aa3.75□□□□□ -1.81
MAP3K4-215ENST00000544041 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
MAP3K4-215ENST00000544041 MUC2Q02817 5179 aa3.72□□□□□ -1.81
MAP3K4-215ENST00000544041 FSIP2Q5CZC0 6907 aa3.71□□□□□ -1.82
MAP3K4-215ENST00000544041 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
MAP3K4-215ENST00000544041 LCE5AQ5TCM9 118 aa3.7□□□□□ -1.82
MAP3K4-215ENST00000544041 KRTAP9-2Q9BYQ4 174 aa3.68□□□□□ -1.82
MAP3K4-215ENST00000544041 LCE1DQ5T752 114 aa3.66□□□□□ -1.82
MAP3K4-215ENST00000544041 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
MAP3K4-215ENST00000544041 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
MAP3K4-215ENST00000544041 KRTAP9-4Q9BYQ2 154 aa3.63□□□□□ -1.83
MAP3K4-215ENST00000544041 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
MAP3K4-215ENST00000544041 FCGBPQ9Y6R7 5405 aaPredicted RBP3.54□□□□□ -1.84
MAP3K4-215ENST00000544041 SYNE2Q8WXH0 6885 aaKnown RBP3.54□□□□□ -1.84
MAP3K4-215ENST00000544041 USH2AO75445 5202 aa3.48□□□□□ -1.85
MAP3K4-215ENST00000544041 KRTAP9-6A0A140TA67 174 aa3.46□□□□□ -1.86
MAP3K4-215ENST00000544041 KRTAP2-2Q9BYT5 123 aa3.4□□□□□ -1.86
MAP3K4-215ENST00000544041 KMT2DO14686 5537 aa3.36□□□□□ -1.87
MAP3K4-215ENST00000544041 DSTQ03001 7570 aaKnown RBP3.35□□□□□ -1.87
MAP3K4-215ENST00000544041 KRTAP20-1Q3LI63 56 aa3.34□□□□□ -1.87
MAP3K4-215ENST00000544041 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
MAP3K4-215ENST00000544041 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
MAP3K4-215ENST00000544041 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.18□□□□□ -1.9
MAP3K4-215ENST00000544041 SSPOA2VEC9 5147 aa3.15□□□□□ -1.91
MAP3K4-215ENST00000544041 MUC12Q9UKN1 5478 aa3.13□□□□□ -1.91
MAP3K4-215ENST00000544041 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
MAP3K4-215ENST00000544041 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
MAP3K4-215ENST00000544041 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
MAP3K4-215ENST00000544041 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
MAP3K4-215ENST00000544041 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
MAP3K4-215ENST00000544041 KRTAP4-11Q9BYQ6 195 aa3.04□□□□□ -1.92
MAP3K4-215ENST00000544041 MACF1Q9UPN3 7388 aaKnown RBP3□□□□□ -1.93
MAP3K4-215ENST00000544041 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
MAP3K4-215ENST00000544041 KRTAP20-2Q3LI61 65 aa2.89□□□□□ -1.95
MAP3K4-215ENST00000544041 KRTAP4-6Q9BYQ5 205 aa2.89□□□□□ -1.95
MAP3K4-215ENST00000544041 KRTAP9-9Q9BYP9 154 aa2.81□□□□□ -1.96
MAP3K4-215ENST00000544041 MDN1Q9NU22 5596 aa2.8□□□□□ -1.96
MAP3K4-215ENST00000544041 NEBP20929 6669 aa2.8□□□□□ -1.96
MAP3K4-215ENST00000544041 KRTAP5-4Q6L8H1 288 aa2.66□□□□□ -1.98
MAP3K4-215ENST00000544041 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
MAP3K4-215ENST00000544041 GPR98Q8WXG9 6306 aa2.59□□□□□ -2
MAP3K4-215ENST00000544041 KRTAP4-12Q9BQ66 201 aa2.49□□□□□ -2.01
MAP3K4-215ENST00000544041 KRTAP4-2Q9BYR5 136 aa2.49□□□□□ -2.01
MAP3K4-215ENST00000544041 MUC5ACP98088 5654 aa2.45□□□□□ -2.02
MAP3K4-215ENST00000544041 KRTAP5-10Q6L8G5 202 aa2.41□□□□□ -2.02
MAP3K4-215ENST00000544041 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
MAP3K4-215ENST00000544041 KRTAP5-3Q6L8H2 238 aa2.32□□□□□ -2.04
MAP3K4-215ENST00000544041 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
MAP3K4-215ENST00000544041 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
MAP3K4-215ENST00000544041 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
MAP3K4-215ENST00000544041 KRTAP5-1Q6L8H4 278 aa2.03□□□□□ -2.08
MAP3K4-215ENST00000544041 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
MAP3K4-215ENST00000544041 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
MAP3K4-215ENST00000544041 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
MAP3K4-215ENST00000544041 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
MAP3K4-215ENST00000544041 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
MAP3K4-215ENST00000544041 PHGR1C9JFL3 82 aa1.84□□□□□ -2.12
MAP3K4-215ENST00000544041 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
MAP3K4-215ENST00000544041 KRTAP5-7Q6L8G8 165 aa1.59□□□□□ -2.16
MAP3K4-215ENST00000544041 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 116.7 ms