RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 HERC2O95714 4834 aa3.18□□□□□ -1.9
GABRB3-204ENST00000541819 LRP2P98164 4655 aa3.14□□□□□ -1.91
GABRB3-204ENST00000541819 KRTAP20-1Q3LI63 56 aa3.13□□□□□ -1.91
GABRB3-204ENST00000541819 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
GABRB3-204ENST00000541819 MT1AP04731 61 aa3.11□□□□□ -1.91
GABRB3-204ENST00000541819 FLGP20930 4061 aaPredicted RBP3.11□□□□□ -1.91
GABRB3-204ENST00000541819 PCLOQ9Y6V0 5065 aa3.09□□□□□ -1.92
GABRB3-204ENST00000541819 EPPK1P58107 5090 aaKnown RBP3.07□□□□□ -1.92
GABRB3-204ENST00000541819 KMT2CQ8NEZ4 4911 aaKnown RBP3.05□□□□□ -1.92
GABRB3-204ENST00000541819 LPAP08519 4548 aa3.05□□□□□ -1.92
GABRB3-204ENST00000541819 KRTAP2-3P0C7H8 128 aa3.01□□□□□ -1.93
GABRB3-204ENST00000541819 KRTAP2-4Q9BYR9 128 aa3.01□□□□□ -1.93
GABRB3-204ENST00000541819 KRTAP2-1Q9BYU5 128 aa3.01□□□□□ -1.93
GABRB3-204ENST00000541819 KRTAP9-7A8MTY7 169 aa3.01□□□□□ -1.93
GABRB3-204ENST00000541819 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
GABRB3-204ENST00000541819 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
GABRB3-204ENST00000541819 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
GABRB3-204ENST00000541819 LCE1AQ5T7P2 110 aa2.99□□□□□ -1.93
GABRB3-204ENST00000541819 KRTAP4-9Q9BYQ8 210 aa2.98□□□□□ -1.93
GABRB3-204ENST00000541819 KRTAP19-7Q3SYF9 63 aa2.92□□□□□ -1.94
GABRB3-204ENST00000541819 LCE4AQ5TA78 99 aa2.91□□□□□ -1.94
GABRB3-204ENST00000541819 FSIP2Q5CZC0 6907 aa2.9□□□□□ -1.95
GABRB3-204ENST00000541819 ABCA13Q86UQ4 5058 aa2.89□□□□□ -1.95
GABRB3-204ENST00000541819 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
GABRB3-204ENST00000541819 KRTAP6-3Q3LI67 103 aa2.88□□□□□ -1.95
GABRB3-204ENST00000541819 SYNE2Q8WXH0 6885 aaKnown RBP2.87□□□□□ -1.95
GABRB3-204ENST00000541819 KRTAP9-4Q9BYQ2 154 aa2.87□□□□□ -1.95
GABRB3-204ENST00000541819 LCE2AQ5TA79 106 aaPredicted RBP2.86□□□□□ -1.95
GABRB3-204ENST00000541819 KRTAP6-1Q3LI64 71 aa2.83□□□□□ -1.96
GABRB3-204ENST00000541819 KRTAP2-2Q9BYT5 123 aa2.81□□□□□ -1.96
GABRB3-204ENST00000541819 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
GABRB3-204ENST00000541819 RNF213Q63HN8 5207 aa2.8□□□□□ -1.96
GABRB3-204ENST00000541819 FAT4Q6V0I7 4981 aa2.8□□□□□ -1.96
GABRB3-204ENST00000541819 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.78□□□□□ -1.97
GABRB3-204ENST00000541819 HMCN2Q8NDA2 5059 aa2.77□□□□□ -1.97
GABRB3-204ENST00000541819 UBR4Q5T4S7 5183 aa2.75□□□□□ -1.97
GABRB3-204ENST00000541819 KRTAP9-9Q9BYP9 154 aa2.68□□□□□ -1.98
GABRB3-204ENST00000541819 MUC2Q02817 5179 aa2.68□□□□□ -1.98
GABRB3-204ENST00000541819 KRTAP9-6A8MVA2 160 aa2.63□□□□□ -1.99
GABRB3-204ENST00000541819 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
GABRB3-204ENST00000541819 MACF1Q9UPN3 7388 aaKnown RBP2.45□□□□□ -2.02
GABRB3-204ENST00000541819 KRTAP4-11Q9BYQ6 195 aa2.43□□□□□ -2.02
GABRB3-204ENST00000541819 KRTAP20-2Q3LI61 65 aa2.4□□□□□ -2.03
GABRB3-204ENST00000541819 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
GABRB3-204ENST00000541819 NEBP20929 6669 aa2.35□□□□□ -2.03
GABRB3-204ENST00000541819 DSTQ03001 7570 aaKnown RBP2.35□□□□□ -2.03
GABRB3-204ENST00000541819 USH2AO75445 5202 aa2.34□□□□□ -2.04
GABRB3-204ENST00000541819 KRTAP5-9P26371 169 aa2.28□□□□□ -2.04
GABRB3-204ENST00000541819 KRTAP4-6Q9BYQ5 205 aa2.27□□□□□ -2.05
GABRB3-204ENST00000541819 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
GABRB3-204ENST00000541819 KMT2DO14686 5537 aa2.25□□□□□ -2.05
GABRB3-204ENST00000541819 KRTAP4-12Q9BQ66 201 aa2.23□□□□□ -2.05
GABRB3-204ENST00000541819 KRTAP4-2Q9BYR5 136 aa2.23□□□□□ -2.05
GABRB3-204ENST00000541819 FCGBPQ9Y6R7 5405 aaPredicted RBP2.16□□□□□ -2.06
GABRB3-204ENST00000541819 SSPOA2VEC9 5147 aa2.14□□□□□ -2.07
GABRB3-204ENST00000541819 KRTAP5-4Q6L8H1 288 aa2.14□□□□□ -2.07
GABRB3-204ENST00000541819 MDN1Q9NU22 5596 aa2.11□□□□□ -2.07
GABRB3-204ENST00000541819 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
GABRB3-204ENST00000541819 KRTAP5-5Q701N2 237 aaPredicted RBP2□□□□□ -2.09
GABRB3-204ENST00000541819 MUC12Q9UKN1 5478 aa2□□□□□ -2.09
GABRB3-204ENST00000541819 KRTAP5-3Q6L8H2 238 aa1.85□□□□□ -2.11
GABRB3-204ENST00000541819 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
GABRB3-204ENST00000541819 AHNAK2Q8IVF2 5795 aa1.73□□□□□ -2.13
GABRB3-204ENST00000541819 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
GABRB3-204ENST00000541819 KRTAP5-8O75690 187 aa1.66□□□□□ -2.14
GABRB3-204ENST00000541819 KRTAP5-2Q701N4 177 aa1.65□□□□□ -2.14
GABRB3-204ENST00000541819 HMCN1Q96RW7 5635 aa1.61□□□□□ -2.15
GABRB3-204ENST00000541819 KRTAP5-10Q6L8G5 202 aa1.61□□□□□ -2.15
GABRB3-204ENST00000541819 MUC5BQ9HC84 5762 aaPredicted RBP1.46□□□□□ -2.18
GABRB3-204ENST00000541819 KRTAP5-11Q6L8G4 156 aa1.45□□□□□ -2.18
GABRB3-204ENST00000541819 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
GABRB3-204ENST00000541819 KRTAP5-1Q6L8H4 278 aa1.42□□□□□ -2.18
GABRB3-204ENST00000541819 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
GABRB3-204ENST00000541819 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.37□□□□□ -2.19
GABRB3-204ENST00000541819 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
GABRB3-204ENST00000541819 KRTAP5-7Q6L8G8 165 aa1.28□□□□□ -2.2
GABRB3-204ENST00000541819 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms