RNA–Protein interactions for RNA: ENST00000541030.5

STRC-213, Transcript of stereocilin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene STRC, Length 5,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-213ENST00000541030 KRTAP19-6Q3LI70 58 aa3.79□□□□□ -1.8
STRC-213ENST00000541030 FLGP20930 4061 aaPredicted RBP3.72□□□□□ -1.81
STRC-213ENST00000541030 UBR4Q5T4S7 5183 aa3.71□□□□□ -1.82
STRC-213ENST00000541030 KRTAP9-2Q9BYQ4 174 aa3.68□□□□□ -1.82
STRC-213ENST00000541030 LOC100996750A0A140TA64 210 aa3.68□□□□□ -1.82
STRC-213ENST00000541030 LCE2AQ5TA79 106 aaPredicted RBP3.67□□□□□ -1.82
STRC-213ENST00000541030 MT4P47944 62 aa3.65□□□□□ -1.83
STRC-213ENST00000541030 MT1AP04731 61 aa3.65□□□□□ -1.83
STRC-213ENST00000541030 RNF213Q63HN8 5207 aa3.64□□□□□ -1.83
STRC-213ENST00000541030 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
STRC-213ENST00000541030 KRTAP2-3P0C7H8 128 aa3.62□□□□□ -1.83
STRC-213ENST00000541030 KRTAP2-4Q9BYR9 128 aa3.62□□□□□ -1.83
STRC-213ENST00000541030 KRTAP2-1Q9BYU5 128 aa3.62□□□□□ -1.83
STRC-213ENST00000541030 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
STRC-213ENST00000541030 FAT4Q6V0I7 4981 aa3.6□□□□□ -1.83
STRC-213ENST00000541030 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
STRC-213ENST00000541030 LCE1DQ5T752 114 aa3.6□□□□□ -1.83
STRC-213ENST00000541030 FSIP2Q5CZC0 6907 aa3.58□□□□□ -1.84
STRC-213ENST00000541030 HMCN2Q8NDA2 5059 aa3.5□□□□□ -1.85
STRC-213ENST00000541030 KRTAP9-6A0A140TA67 174 aa3.48□□□□□ -1.85
STRC-213ENST00000541030 MUC2Q02817 5179 aa3.48□□□□□ -1.85
STRC-213ENST00000541030 KRTAP4-9Q9BYQ8 210 aa3.43□□□□□ -1.86
STRC-213ENST00000541030 LCE5AQ5TCM9 118 aa3.43□□□□□ -1.86
STRC-213ENST00000541030 LCE1AQ5T7P2 110 aa3.42□□□□□ -1.86
STRC-213ENST00000541030 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.87
STRC-213ENST00000541030 KRTAP6-2Q3LI66 62 aa3.34□□□□□ -1.88
STRC-213ENST00000541030 KRTAP6-3Q3LI67 103 aa3.34□□□□□ -1.88
STRC-213ENST00000541030 KRTAP9-4Q9BYQ2 154 aa3.34□□□□□ -1.88
STRC-213ENST00000541030 KRTAP6-1Q3LI64 71 aa3.32□□□□□ -1.88
STRC-213ENST00000541030 KRTAP9-7A8MTY7 169 aa3.3□□□□□ -1.88
STRC-213ENST00000541030 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
STRC-213ENST00000541030 KRTAP9-6A8MVA2 160 aa3.29□□□□□ -1.88
STRC-213ENST00000541030 SYNE2Q8WXH0 6885 aaKnown RBP3.29□□□□□ -1.88
STRC-213ENST00000541030 LCE4AQ5TA78 99 aa3.26□□□□□ -1.89
STRC-213ENST00000541030 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.2□□□□□ -1.9
STRC-213ENST00000541030 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
STRC-213ENST00000541030 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
STRC-213ENST00000541030 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
STRC-213ENST00000541030 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.91
STRC-213ENST00000541030 USH2AO75445 5202 aa3.11□□□□□ -1.91
STRC-213ENST00000541030 FCGBPQ9Y6R7 5405 aaPredicted RBP3.09□□□□□ -1.91
STRC-213ENST00000541030 DSTQ03001 7570 aaKnown RBP3.06□□□□□ -1.92
STRC-213ENST00000541030 MACF1Q9UPN3 7388 aaKnown RBP2.99□□□□□ -1.93
STRC-213ENST00000541030 KMT2DO14686 5537 aa2.92□□□□□ -1.94
STRC-213ENST00000541030 KRTAP5-9P26371 169 aa2.88□□□□□ -1.95
STRC-213ENST00000541030 KRTAP9-9Q9BYP9 154 aa2.86□□□□□ -1.95
STRC-213ENST00000541030 NEBP20929 6669 aa2.8□□□□□ -1.96
STRC-213ENST00000541030 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
STRC-213ENST00000541030 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
STRC-213ENST00000541030 SSPOA2VEC9 5147 aa2.75□□□□□ -1.97
STRC-213ENST00000541030 KRTAP4-11Q9BYQ6 195 aa2.75□□□□□ -1.97
STRC-213ENST00000541030 MUC12Q9UKN1 5478 aa2.71□□□□□ -1.98
STRC-213ENST00000541030 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
STRC-213ENST00000541030 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
STRC-213ENST00000541030 KRTAP4-6Q9BYQ5 205 aa2.67□□□□□ -1.98
STRC-213ENST00000541030 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
STRC-213ENST00000541030 KRTAP5-4Q6L8H1 288 aa2.5□□□□□ -2.01
STRC-213ENST00000541030 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
STRC-213ENST00000541030 KRTAP4-12Q9BQ66 201 aa2.37□□□□□ -2.03
STRC-213ENST00000541030 KRTAP4-2Q9BYR5 136 aa2.37□□□□□ -2.03
STRC-213ENST00000541030 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
STRC-213ENST00000541030 HMCN1Q96RW7 5635 aa2.22□□□□□ -2.05
STRC-213ENST00000541030 KRTAP5-3Q6L8H2 238 aa2.2□□□□□ -2.06
STRC-213ENST00000541030 AHNAK2Q8IVF2 5795 aa2.19□□□□□ -2.06
STRC-213ENST00000541030 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
STRC-213ENST00000541030 KRTAP5-8O75690 187 aa1.99□□□□□ -2.09
STRC-213ENST00000541030 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
STRC-213ENST00000541030 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
STRC-213ENST00000541030 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
STRC-213ENST00000541030 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
STRC-213ENST00000541030 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
STRC-213ENST00000541030 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
STRC-213ENST00000541030 KRTAP5-1Q6L8H4 278 aa1.74□□□□□ -2.13
STRC-213ENST00000541030 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
STRC-213ENST00000541030 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
STRC-213ENST00000541030 KRTAP5-7Q6L8G8 165 aa1.46□□□□□ -2.18
STRC-213ENST00000541030 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 33.8 ms