RNA–Protein interactions for RNA: ENST00000539935.6

CACNB4-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 8,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-210ENST00000539935 LCE5AQ5TCM9 118 aa3.88□□□□□ -1.79
CACNB4-210ENST00000539935 MT1MQ8N339 61 aa3.88□□□□□ -1.79
CACNB4-210ENST00000539935 KRTAP19-6Q3LI70 58 aa3.85□□□□□ -1.79
CACNB4-210ENST00000539935 KRTAP9-2Q9BYQ4 174 aa3.82□□□□□ -1.8
CACNB4-210ENST00000539935 LOC100996750A0A140TA64 210 aa3.79□□□□□ -1.8
CACNB4-210ENST00000539935 LCE2AQ5TA79 106 aaPredicted RBP3.75□□□□□ -1.81
CACNB4-210ENST00000539935 LCE1CQ5T751 118 aa3.75□□□□□ -1.81
CACNB4-210ENST00000539935 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
CACNB4-210ENST00000539935 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
CACNB4-210ENST00000539935 LCE1AQ5T7P2 110 aa3.75□□□□□ -1.81
CACNB4-210ENST00000539935 KRTAP4-3Q9BYR4 195 aa3.69□□□□□ -1.82
CACNB4-210ENST00000539935 MT1AP04731 61 aa3.63□□□□□ -1.83
CACNB4-210ENST00000539935 KRTAP2-3P0C7H8 128 aa3.63□□□□□ -1.83
CACNB4-210ENST00000539935 KRTAP2-4Q9BYR9 128 aa3.63□□□□□ -1.83
CACNB4-210ENST00000539935 KRTAP2-1Q9BYU5 128 aa3.63□□□□□ -1.83
CACNB4-210ENST00000539935 EPPK1P58107 5090 aaKnown RBP3.61□□□□□ -1.83
CACNB4-210ENST00000539935 KRTAP9-6A0A140TA67 174 aa3.6□□□□□ -1.83
CACNB4-210ENST00000539935 LCE4AQ5TA78 99 aa3.6□□□□□ -1.83
CACNB4-210ENST00000539935 KRTAP4-9Q9BYQ8 210 aa3.56□□□□□ -1.84
CACNB4-210ENST00000539935 SYNE2Q8WXH0 6885 aaKnown RBP3.54□□□□□ -1.84
CACNB4-210ENST00000539935 ABCA13Q86UQ4 5058 aa3.53□□□□□ -1.84
CACNB4-210ENST00000539935 KRTAP19-7Q3SYF9 63 aa3.52□□□□□ -1.85
CACNB4-210ENST00000539935 SYNE1Q8NF91 8797 aaKnown RBP3.51□□□□□ -1.85
CACNB4-210ENST00000539935 HMCN2Q8NDA2 5059 aa3.5□□□□□ -1.85
CACNB4-210ENST00000539935 FAT4Q6V0I7 4981 aa3.48□□□□□ -1.85
CACNB4-210ENST00000539935 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
CACNB4-210ENST00000539935 RNF213Q63HN8 5207 aa3.47□□□□□ -1.85
CACNB4-210ENST00000539935 KRTAP20-1Q3LI63 56 aa3.45□□□□□ -1.86
CACNB4-210ENST00000539935 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
CACNB4-210ENST00000539935 KRTAP9-7A8MTY7 169 aa3.39□□□□□ -1.87
CACNB4-210ENST00000539935 KRTAP6-1Q3LI64 71 aa3.36□□□□□ -1.87
CACNB4-210ENST00000539935 KRTAP9-4Q9BYQ2 154 aa3.35□□□□□ -1.87
CACNB4-210ENST00000539935 FSIP2Q5CZC0 6907 aa3.34□□□□□ -1.87
CACNB4-210ENST00000539935 UBR4Q5T4S7 5183 aa3.33□□□□□ -1.88
CACNB4-210ENST00000539935 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.31□□□□□ -1.88
CACNB4-210ENST00000539935 KRTAP2-2Q9BYT5 123 aa3.26□□□□□ -1.89
CACNB4-210ENST00000539935 MUC2Q02817 5179 aa3.26□□□□□ -1.89
CACNB4-210ENST00000539935 KRTAP9-6A8MVA2 160 aa3.22□□□□□ -1.89
CACNB4-210ENST00000539935 KRTAP9-9Q9BYP9 154 aa3.14□□□□□ -1.91
CACNB4-210ENST00000539935 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.91
CACNB4-210ENST00000539935 KRTAP4-11Q9BYQ6 195 aa3.04□□□□□ -1.92
CACNB4-210ENST00000539935 KRTAP20-2Q3LI61 65 aa3.02□□□□□ -1.93
CACNB4-210ENST00000539935 KRTAP5-9P26371 169 aa2.99□□□□□ -1.93
CACNB4-210ENST00000539935 KMT2DO14686 5537 aa2.85□□□□□ -1.95
CACNB4-210ENST00000539935 USH2AO75445 5202 aa2.85□□□□□ -1.95
CACNB4-210ENST00000539935 DSTQ03001 7570 aaKnown RBP2.83□□□□□ -1.96
CACNB4-210ENST00000539935 NEBP20929 6669 aa2.77□□□□□ -1.97
CACNB4-210ENST00000539935 MACF1Q9UPN3 7388 aaKnown RBP2.76□□□□□ -1.97
CACNB4-210ENST00000539935 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
CACNB4-210ENST00000539935 FCGBPQ9Y6R7 5405 aaPredicted RBP2.74□□□□□ -1.97
CACNB4-210ENST00000539935 SSPOA2VEC9 5147 aa2.73□□□□□ -1.97
CACNB4-210ENST00000539935 KRTAP4-6Q9BYQ5 205 aa2.7□□□□□ -1.98
CACNB4-210ENST00000539935 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
CACNB4-210ENST00000539935 KRTAP4-2Q9BYR5 136 aa2.64□□□□□ -1.99
CACNB4-210ENST00000539935 KRTAP5-4Q6L8H1 288 aa2.6□□□□□ -1.99
CACNB4-210ENST00000539935 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
CACNB4-210ENST00000539935 MUC12Q9UKN1 5478 aa2.56□□□□□ -2
CACNB4-210ENST00000539935 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
CACNB4-210ENST00000539935 MDN1Q9NU22 5596 aa2.44□□□□□ -2.02
CACNB4-210ENST00000539935 KRTAP5-3Q6L8H2 238 aa2.25□□□□□ -2.05
CACNB4-210ENST00000539935 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
CACNB4-210ENST00000539935 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
CACNB4-210ENST00000539935 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
CACNB4-210ENST00000539935 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
CACNB4-210ENST00000539935 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
CACNB4-210ENST00000539935 KRTAP5-10Q6L8G5 202 aa1.95□□□□□ -2.1
CACNB4-210ENST00000539935 HMCN1Q96RW7 5635 aa1.94□□□□□ -2.1
CACNB4-210ENST00000539935 AHNAK2Q8IVF2 5795 aa1.91□□□□□ -2.1
CACNB4-210ENST00000539935 MUC5BQ9HC84 5762 aaPredicted RBP1.86□□□□□ -2.11
CACNB4-210ENST00000539935 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
CACNB4-210ENST00000539935 KRTAP5-1Q6L8H4 278 aa1.78□□□□□ -2.12
CACNB4-210ENST00000539935 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
CACNB4-210ENST00000539935 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
CACNB4-210ENST00000539935 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
CACNB4-210ENST00000539935 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.66□□□□□ -2.14
CACNB4-210ENST00000539935 KRTAP5-7Q6L8G8 165 aa1.59□□□□□ -2.16
CACNB4-210ENST00000539935 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 202 ms