RNA–Protein interactions for RNA: ENST00000535325.5

FYCO1-205, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene FYCO1, Length 8,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-205ENST00000535325 LCE1AQ5T7P2 110 aa4.42□□□□□ -1.7
FYCO1-205ENST00000535325 MT4P47944 62 aa4.41□□□□□ -1.7
FYCO1-205ENST00000535325 PCLOQ9Y6V0 5065 aa4.35□□□□□ -1.71
FYCO1-205ENST00000535325 LCE2AQ5TA79 106 aaPredicted RBP4.35□□□□□ -1.71
FYCO1-205ENST00000535325 LCE1DQ5T752 114 aa4.35□□□□□ -1.71
FYCO1-205ENST00000535325 BIRC6Q9NR09 4857 aa4.33□□□□□ -1.72
FYCO1-205ENST00000535325 KRTAP9-2Q9BYQ4 174 aa4.32□□□□□ -1.72
FYCO1-205ENST00000535325 KRTAP4-3Q9BYR4 195 aa4.29□□□□□ -1.72
FYCO1-205ENST00000535325 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
FYCO1-205ENST00000535325 LCE5AQ5TCM9 118 aa4.25□□□□□ -1.73
FYCO1-205ENST00000535325 HERC2O95714 4834 aa4.24□□□□□ -1.73
FYCO1-205ENST00000535325 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
FYCO1-205ENST00000535325 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
FYCO1-205ENST00000535325 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
FYCO1-205ENST00000535325 HMCN2Q8NDA2 5059 aa4.14□□□□□ -1.75
FYCO1-205ENST00000535325 KIAA1109Q2LD37 5005 aa4.13□□□□□ -1.75
FYCO1-205ENST00000535325 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
FYCO1-205ENST00000535325 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
FYCO1-205ENST00000535325 KRTAP6-3Q3LI67 103 aa4.09□□□□□ -1.75
FYCO1-205ENST00000535325 SYNE2Q8WXH0 6885 aaKnown RBP4.09□□□□□ -1.76
FYCO1-205ENST00000535325 KRTAP4-9Q9BYQ8 210 aa4.07□□□□□ -1.76
FYCO1-205ENST00000535325 HERC1Q15751 4861 aa4.05□□□□□ -1.76
FYCO1-205ENST00000535325 KRTAP20-1Q3LI63 56 aa4.04□□□□□ -1.76
FYCO1-205ENST00000535325 KRTAP9-6A0A140TA67 174 aa3.99□□□□□ -1.77
FYCO1-205ENST00000535325 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
FYCO1-205ENST00000535325 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
FYCO1-205ENST00000535325 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.75□□□□□ -1.81
FYCO1-205ENST00000535325 EPPK1P58107 5090 aaKnown RBP3.71□□□□□ -1.82
FYCO1-205ENST00000535325 RNF213Q63HN8 5207 aa3.68□□□□□ -1.82
FYCO1-205ENST00000535325 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
FYCO1-205ENST00000535325 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
FYCO1-205ENST00000535325 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
FYCO1-205ENST00000535325 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
FYCO1-205ENST00000535325 SYNE1Q8NF91 8797 aaKnown RBP3.63□□□□□ -1.83
FYCO1-205ENST00000535325 FAT4Q6V0I7 4981 aa3.6□□□□□ -1.83
FYCO1-205ENST00000535325 KRTAP9-9Q9BYP9 154 aa3.58□□□□□ -1.84
FYCO1-205ENST00000535325 MUC2Q02817 5179 aa3.57□□□□□ -1.84
FYCO1-205ENST00000535325 ABCA13Q86UQ4 5058 aa3.51□□□□□ -1.85
FYCO1-205ENST00000535325 UBR4Q5T4S7 5183 aa3.48□□□□□ -1.85
FYCO1-205ENST00000535325 FSIP2Q5CZC0 6907 aa3.47□□□□□ -1.85
FYCO1-205ENST00000535325 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
FYCO1-205ENST00000535325 KMT2DO14686 5537 aa3.32□□□□□ -1.88
FYCO1-205ENST00000535325 KRTAP4-11Q9BYQ6 195 aa3.29□□□□□ -1.88
FYCO1-205ENST00000535325 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
FYCO1-205ENST00000535325 KRTAP4-6Q9BYQ5 205 aa3.2□□□□□ -1.9
FYCO1-205ENST00000535325 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
FYCO1-205ENST00000535325 NEBP20929 6669 aa3.09□□□□□ -1.92
FYCO1-205ENST00000535325 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
FYCO1-205ENST00000535325 MDN1Q9NU22 5596 aa2.98□□□□□ -1.93
FYCO1-205ENST00000535325 FCGBPQ9Y6R7 5405 aaPredicted RBP2.95□□□□□ -1.94
FYCO1-205ENST00000535325 SSPOA2VEC9 5147 aa2.91□□□□□ -1.94
FYCO1-205ENST00000535325 DSTQ03001 7570 aaKnown RBP2.89□□□□□ -1.95
FYCO1-205ENST00000535325 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
FYCO1-205ENST00000535325 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
FYCO1-205ENST00000535325 MACF1Q9UPN3 7388 aaKnown RBP2.8□□□□□ -1.96
FYCO1-205ENST00000535325 USH2AO75445 5202 aa2.77□□□□□ -1.97
FYCO1-205ENST00000535325 MUC12Q9UKN1 5478 aa2.72□□□□□ -1.97
FYCO1-205ENST00000535325 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
FYCO1-205ENST00000535325 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
FYCO1-205ENST00000535325 MUC5ACP98088 5654 aa2.65□□□□□ -1.99
FYCO1-205ENST00000535325 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
FYCO1-205ENST00000535325 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
FYCO1-205ENST00000535325 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.02
FYCO1-205ENST00000535325 KRTAP5-11Q6L8G4 156 aa2.39□□□□□ -2.03
FYCO1-205ENST00000535325 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
FYCO1-205ENST00000535325 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
FYCO1-205ENST00000535325 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
FYCO1-205ENST00000535325 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
FYCO1-205ENST00000535325 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
FYCO1-205ENST00000535325 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
FYCO1-205ENST00000535325 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
FYCO1-205ENST00000535325 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
FYCO1-205ENST00000535325 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
FYCO1-205ENST00000535325 AHNAK2Q8IVF2 5795 aa2.06□□□□□ -2.08
FYCO1-205ENST00000535325 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
FYCO1-205ENST00000535325 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
FYCO1-205ENST00000535325 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 534 ms