RNA–Protein interactions for RNA: ENST00000533333.5

PAX6-228, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 6,173 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-228ENST00000533333 HERC2O95714 4834 aa5.32□□□□□ -1.56
PAX6-228ENST00000533333 KMT2CQ8NEZ4 4911 aaKnown RBP5.31□□□□□ -1.56
PAX6-228ENST00000533333 EPPK1P58107 5090 aaKnown RBP5.27□□□□□ -1.57
PAX6-228ENST00000533333 PCLOQ9Y6V0 5065 aa5.27□□□□□ -1.57
PAX6-228ENST00000533333 FLGP20930 4061 aaPredicted RBP5.24□□□□□ -1.57
PAX6-228ENST00000533333 KRTAP4-3Q9BYR4 195 aa5.22□□□□□ -1.57
PAX6-228ENST00000533333 SYNE1Q8NF91 8797 aaKnown RBP5.22□□□□□ -1.57
PAX6-228ENST00000533333 KRTAP9-2Q9BYQ4 174 aa5.21□□□□□ -1.57
PAX6-228ENST00000533333 KRTAP19-6Q3LI70 58 aa5.14□□□□□ -1.59
PAX6-228ENST00000533333 KRTAP20-1Q3LI63 56 aa5.11□□□□□ -1.59
PAX6-228ENST00000533333 LCE1CQ5T751 118 aa5.07□□□□□ -1.6
PAX6-228ENST00000533333 LCE1EQ5T753 118 aa5.07□□□□□ -1.6
PAX6-228ENST00000533333 LCE1FQ5T754 118 aa5.07□□□□□ -1.6
PAX6-228ENST00000533333 LCE1AQ5T7P2 110 aa5.07□□□□□ -1.6
PAX6-228ENST00000533333 MT1AP04731 61 aa5.04□□□□□ -1.6
PAX6-228ENST00000533333 KRTAP4-9Q9BYQ8 210 aa5.04□□□□□ -1.6
PAX6-228ENST00000533333 KRTAP9-6A0A140TA67 174 aa5.02□□□□□ -1.61
PAX6-228ENST00000533333 ABCA13Q86UQ4 5058 aa5.01□□□□□ -1.61
PAX6-228ENST00000533333 KRTAP2-3P0C7H8 128 aa4.94□□□□□ -1.62
PAX6-228ENST00000533333 KRTAP2-4Q9BYR9 128 aa4.94□□□□□ -1.62
PAX6-228ENST00000533333 KRTAP2-1Q9BYU5 128 aa4.94□□□□□ -1.62
PAX6-228ENST00000533333 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
PAX6-228ENST00000533333 KRTAP6-2Q3LI66 62 aa4.78□□□□□ -1.64
PAX6-228ENST00000533333 KRTAP19-7Q3SYF9 63 aa4.73□□□□□ -1.65
PAX6-228ENST00000533333 LCE2AQ5TA79 106 aaPredicted RBP4.72□□□□□ -1.65
PAX6-228ENST00000533333 HMCN2Q8NDA2 5059 aa4.72□□□□□ -1.65
PAX6-228ENST00000533333 SYNE2Q8WXH0 6885 aaKnown RBP4.7□□□□□ -1.66
PAX6-228ENST00000533333 FSIP2Q5CZC0 6907 aa4.69□□□□□ -1.66
PAX6-228ENST00000533333 FAT4Q6V0I7 4981 aa4.69□□□□□ -1.66
PAX6-228ENST00000533333 RNF213Q63HN8 5207 aa4.69□□□□□ -1.66
PAX6-228ENST00000533333 LCE4AQ5TA78 99 aa4.68□□□□□ -1.66
PAX6-228ENST00000533333 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
PAX6-228ENST00000533333 KRTAP6-1Q3LI64 71 aa4.66□□□□□ -1.66
PAX6-228ENST00000533333 UBR4Q5T4S7 5183 aa4.64□□□□□ -1.67
PAX6-228ENST00000533333 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
PAX6-228ENST00000533333 KRTAP6-3Q3LI67 103 aa4.61□□□□□ -1.67
PAX6-228ENST00000533333 MUC2Q02817 5179 aa4.58□□□□□ -1.68
PAX6-228ENST00000533333 KRTAP2-2Q9BYT5 123 aa4.56□□□□□ -1.68
PAX6-228ENST00000533333 KRTAP9-6A8MVA2 160 aa4.51□□□□□ -1.69
PAX6-228ENST00000533333 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
PAX6-228ENST00000533333 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.42□□□□□ -1.7
PAX6-228ENST00000533333 MACF1Q9UPN3 7388 aaKnown RBP4.15□□□□□ -1.74
PAX6-228ENST00000533333 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
PAX6-228ENST00000533333 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
PAX6-228ENST00000533333 DSTQ03001 7570 aaKnown RBP4.07□□□□□ -1.76
PAX6-228ENST00000533333 USH2AO75445 5202 aa4.01□□□□□ -1.77
PAX6-228ENST00000533333 GPR98Q8WXG9 6306 aa3.96□□□□□ -1.78
PAX6-228ENST00000533333 FCGBPQ9Y6R7 5405 aaPredicted RBP3.93□□□□□ -1.78
PAX6-228ENST00000533333 KMT2DO14686 5537 aa3.89□□□□□ -1.79
PAX6-228ENST00000533333 MUC19Q7Z5P9 8384 aa3.89□□□□□ -1.79
PAX6-228ENST00000533333 NEBP20929 6669 aa3.88□□□□□ -1.79
PAX6-228ENST00000533333 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
PAX6-228ENST00000533333 KRTAP4-12Q9BQ66 201 aa3.8□□□□□ -1.8
PAX6-228ENST00000533333 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
PAX6-228ENST00000533333 KRTAP4-6Q9BYQ5 205 aa3.79□□□□□ -1.8
PAX6-228ENST00000533333 KRTAP5-9P26371 169 aa3.76□□□□□ -1.81
PAX6-228ENST00000533333 SSPOA2VEC9 5147 aa3.67□□□□□ -1.82
PAX6-228ENST00000533333 MDN1Q9NU22 5596 aa3.66□□□□□ -1.82
PAX6-228ENST00000533333 MUC12Q9UKN1 5478 aa3.62□□□□□ -1.83
PAX6-228ENST00000533333 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
PAX6-228ENST00000533333 KRTAP5-4Q6L8H1 288 aa3.37□□□□□ -1.87
PAX6-228ENST00000533333 AHNAK2Q8IVF2 5795 aa3.04□□□□□ -1.92
PAX6-228ENST00000533333 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
PAX6-228ENST00000533333 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
PAX6-228ENST00000533333 KRTAP5-3Q6L8H2 238 aa2.94□□□□□ -1.94
PAX6-228ENST00000533333 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
PAX6-228ENST00000533333 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
PAX6-228ENST00000533333 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
PAX6-228ENST00000533333 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
PAX6-228ENST00000533333 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
PAX6-228ENST00000533333 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
PAX6-228ENST00000533333 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
PAX6-228ENST00000533333 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.04
PAX6-228ENST00000533333 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
PAX6-228ENST00000533333 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
PAX6-228ENST00000533333 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
PAX6-228ENST00000533333 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
PAX6-228ENST00000533333 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 92.6 ms