RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 PCLOQ9Y6V0 5065 aa4.15□□□□□ -1.75
LRRK1-202ENST00000525284 EPPK1P58107 5090 aaKnown RBP4.15□□□□□ -1.75
LRRK1-202ENST00000525284 LOC100996750A0A140TA64 210 aa4.14□□□□□ -1.75
LRRK1-202ENST00000525284 LCE1CQ5T751 118 aa4.09□□□□□ -1.75
LRRK1-202ENST00000525284 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
LRRK1-202ENST00000525284 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
LRRK1-202ENST00000525284 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.75
LRRK1-202ENST00000525284 MT1EP04732 61 aa4.09□□□□□ -1.75
LRRK1-202ENST00000525284 MT1MQ8N339 61 aa4.03□□□□□ -1.76
LRRK1-202ENST00000525284 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
LRRK1-202ENST00000525284 ABCA13Q86UQ4 5058 aa4.01□□□□□ -1.77
LRRK1-202ENST00000525284 KRTAP4-9Q9BYQ8 210 aa4□□□□□ -1.77
LRRK1-202ENST00000525284 HMCN2Q8NDA2 5059 aa3.95□□□□□ -1.78
LRRK1-202ENST00000525284 KRTAP19-6Q3LI70 58 aa3.9□□□□□ -1.79
LRRK1-202ENST00000525284 MUC2Q02817 5179 aa3.88□□□□□ -1.79
LRRK1-202ENST00000525284 LCE4AQ5TA78 99 aa3.88□□□□□ -1.79
LRRK1-202ENST00000525284 KRTAP9-2Q9BYQ4 174 aa3.88□□□□□ -1.79
LRRK1-202ENST00000525284 KRTAP20-1Q3LI63 56 aa3.87□□□□□ -1.79
LRRK1-202ENST00000525284 FAT4Q6V0I7 4981 aa3.85□□□□□ -1.79
LRRK1-202ENST00000525284 KRTAP2-3P0C7H8 128 aa3.8□□□□□ -1.8
LRRK1-202ENST00000525284 KRTAP2-4Q9BYR9 128 aa3.8□□□□□ -1.8
LRRK1-202ENST00000525284 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
LRRK1-202ENST00000525284 MT1AP04731 61 aa3.79□□□□□ -1.8
LRRK1-202ENST00000525284 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
LRRK1-202ENST00000525284 KRTAP19-7Q3SYF9 63 aa3.76□□□□□ -1.81
LRRK1-202ENST00000525284 FSIP2Q5CZC0 6907 aa3.74□□□□□ -1.81
LRRK1-202ENST00000525284 RNF213Q63HN8 5207 aa3.74□□□□□ -1.81
LRRK1-202ENST00000525284 SYNE1Q8NF91 8797 aaKnown RBP3.73□□□□□ -1.81
LRRK1-202ENST00000525284 KRTAP9-6A0A140TA67 174 aa3.72□□□□□ -1.81
LRRK1-202ENST00000525284 UBR4Q5T4S7 5183 aa3.69□□□□□ -1.82
LRRK1-202ENST00000525284 SYNE2Q8WXH0 6885 aaKnown RBP3.68□□□□□ -1.82
LRRK1-202ENST00000525284 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
LRRK1-202ENST00000525284 LCE2AQ5TA79 106 aaPredicted RBP3.64□□□□□ -1.83
LRRK1-202ENST00000525284 KRTAP9-7A8MTY7 169 aa3.62□□□□□ -1.83
LRRK1-202ENST00000525284 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
LRRK1-202ENST00000525284 KRTAP2-2Q9BYT5 123 aa3.52□□□□□ -1.85
LRRK1-202ENST00000525284 KRTAP9-4Q9BYQ2 154 aa3.5□□□□□ -1.85
LRRK1-202ENST00000525284 KMT2DO14686 5537 aa3.5□□□□□ -1.85
LRRK1-202ENST00000525284 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
LRRK1-202ENST00000525284 KRTAP9-9Q9BYP9 154 aa3.37□□□□□ -1.87
LRRK1-202ENST00000525284 KRTAP20-2Q3LI61 65 aa3.36□□□□□ -1.87
LRRK1-202ENST00000525284 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
LRRK1-202ENST00000525284 KRTAP6-3Q3LI67 103 aa3.3□□□□□ -1.88
LRRK1-202ENST00000525284 USH2AO75445 5202 aa3.26□□□□□ -1.89
LRRK1-202ENST00000525284 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.2□□□□□ -1.9
LRRK1-202ENST00000525284 FCGBPQ9Y6R7 5405 aaPredicted RBP3.17□□□□□ -1.9
LRRK1-202ENST00000525284 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
LRRK1-202ENST00000525284 KRTAP4-6Q9BYQ5 205 aa3.11□□□□□ -1.91
LRRK1-202ENST00000525284 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
LRRK1-202ENST00000525284 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
LRRK1-202ENST00000525284 DSTQ03001 7570 aaKnown RBP3.08□□□□□ -1.92
LRRK1-202ENST00000525284 SSPOA2VEC9 5147 aa3.02□□□□□ -1.93
LRRK1-202ENST00000525284 MACF1Q9UPN3 7388 aaKnown RBP3□□□□□ -1.93
LRRK1-202ENST00000525284 MUC12Q9UKN1 5478 aa2.98□□□□□ -1.93
LRRK1-202ENST00000525284 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.93
LRRK1-202ENST00000525284 NEBP20929 6669 aa2.9□□□□□ -1.95
LRRK1-202ENST00000525284 KRTAP5-9P26371 169 aa2.85□□□□□ -1.95
LRRK1-202ENST00000525284 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
LRRK1-202ENST00000525284 MDN1Q9NU22 5596 aa2.83□□□□□ -1.96
LRRK1-202ENST00000525284 KRTAP5-5Q701N2 237 aaPredicted RBP2.76□□□□□ -1.97
LRRK1-202ENST00000525284 AHNAK2Q8IVF2 5795 aa2.56□□□□□ -2
LRRK1-202ENST00000525284 KRTAP5-4Q6L8H1 288 aa2.48□□□□□ -2.01
LRRK1-202ENST00000525284 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
LRRK1-202ENST00000525284 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
LRRK1-202ENST00000525284 KRTAP5-3Q6L8H2 238 aa2.2□□□□□ -2.06
LRRK1-202ENST00000525284 MUC5ACP98088 5654 aa2.15□□□□□ -2.07
LRRK1-202ENST00000525284 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
LRRK1-202ENST00000525284 AHNAKQ09666 5890 aaKnown RBP2.09□□□□□ -2.07
LRRK1-202ENST00000525284 KRTAP5-2Q701N4 177 aa2.04□□□□□ -2.08
LRRK1-202ENST00000525284 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
LRRK1-202ENST00000525284 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
LRRK1-202ENST00000525284 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
LRRK1-202ENST00000525284 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.11
LRRK1-202ENST00000525284 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
LRRK1-202ENST00000525284 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
LRRK1-202ENST00000525284 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.72□□□□□ -2.13
LRRK1-202ENST00000525284 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
LRRK1-202ENST00000525284 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 134.7 ms