RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 DCAF8L2P0C7V8 631 aa22.62■■□□□ 1.21
LRRK1-202ENST00000525284 PELP1Q8IZL8 1130 aaKnown RBP22.59■■□□□ 1.21
LRRK1-202ENST00000525284 ERICH6Q7L0X2 663 aa21.95■■□□□ 1.1
LRRK1-202ENST00000525284 EHMT2Q96KQ7 1210 aa21.67■■□□□ 1.06
LRRK1-202ENST00000525284 CCER1Q8TC90 406 aaPredicted RBP21.56■■□□□ 1.04
LRRK1-202ENST00000525284 SUPT5HO00267 1087 aaKnown RBP21.55■■□□□ 1.04
LRRK1-202ENST00000525284 MYT1Q01538 1121 aa21.4■■□□□ 1.02
LRRK1-202ENST00000525284 CENPBP07199 599 aaPredicted RBP21.19■□□□□ 0.98
LRRK1-202ENST00000525284 APLP2Q06481 763 aa21.17■□□□□ 0.98
LRRK1-202ENST00000525284 TTBK1Q5TCY1 1321 aaPredicted RBP21.02■□□□□ 0.96
LRRK1-202ENST00000525284 NISCHQ9Y2I1 1504 aa20.96■□□□□ 0.95
LRRK1-202ENST00000525284 NEFLP07196 543 aa20.91■□□□□ 0.94
LRRK1-202ENST00000525284 PCGF6Q9BYE7 350 aa20.9■□□□□ 0.94
LRRK1-202ENST00000525284 YTHDC1Q96MU7 727 aaKnown RBP20.81■□□□□ 0.92
LRRK1-202ENST00000525284 DAXXQ9UER7 740 aaPredicted RBP20.7■□□□□ 0.9
LRRK1-202ENST00000525284 SHROOM4Q9ULL8 1493 aa20.65■□□□□ 0.9
LRRK1-202ENST00000525284 FAM9AQ8IZU1 332 aaPredicted RBP20.63■□□□□ 0.89
LRRK1-202ENST00000525284 RANGAP1P46060 587 aaPredicted RBP20.49■□□□□ 0.87
LRRK1-202ENST00000525284 ZEB1P37275 1124 aaPredicted RBP20.47■□□□□ 0.87
LRRK1-202ENST00000525284 ATP1B4Q9UN42 357 aaPredicted RBP20.37■□□□□ 0.85
LRRK1-202ENST00000525284 RTL5Q5HYW3 569 aaPredicted RBP20.22■□□□□ 0.83
LRRK1-202ENST00000525284 ZNF316A6NFI3 1004 aaPredicted RBP20.16■□□□□ 0.82
LRRK1-202ENST00000525284 POLR3GLQ9BT43 218 aa20.08■□□□□ 0.8
LRRK1-202ENST00000525284 CNGB1Q14028 1251 aaPredicted RBP20■□□□□ 0.79
LRRK1-202ENST00000525284 CLSPNQ9HAW4 1339 aa19.98■□□□□ 0.79
LRRK1-202ENST00000525284 CHIC1Q5VXU3 224 aa19.9■□□□□ 0.78
LRRK1-202ENST00000525284 MYT1LQ9UL68 1186 aa19.84■□□□□ 0.77
LRRK1-202ENST00000525284 UBTFP17480 764 aaKnown RBP19.83■□□□□ 0.77
LRRK1-202ENST00000525284 PPARGC1BQ86YN6 1023 aaKnown RBP19.82■□□□□ 0.76
LRRK1-202ENST00000525284 TRIM41Q8WV44 630 aa19.73■□□□□ 0.75
LRRK1-202ENST00000525284 SLC4A1APQ9BWU0 796 aaKnown RBP19.71■□□□□ 0.75
LRRK1-202ENST00000525284 EIF5BO60841 1220 aaKnown RBP19.63■□□□□ 0.73
LRRK1-202ENST00000525284 HRCP23327 699 aa19.62■□□□□ 0.73
LRRK1-202ENST00000525284 ITGAEP38570 1179 aa19.62■□□□□ 0.73
LRRK1-202ENST00000525284 BCANQ96GW7 911 aa19.54■□□□□ 0.72
LRRK1-202ENST00000525284 BCL11AQ9H165 835 aa19.47■□□□□ 0.71
LRRK1-202ENST00000525284 ZBTB47Q9UFB7 747 aaPredicted RBP19.42■□□□□ 0.7
LRRK1-202ENST00000525284 TRIM26Q12899 539 aaPredicted RBP19.41■□□□□ 0.7
LRRK1-202ENST00000525284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.4■□□□□ 0.7
LRRK1-202ENST00000525284 HNRNPUL2Q1KMD3 747 aaKnown RBP19.4■□□□□ 0.7
LRRK1-202ENST00000525284 CDK11AQ9UQ88 783 aaPredicted RBP19.37■□□□□ 0.69
LRRK1-202ENST00000525284 GLIPR1L2Q4G1C9 344 aa19.34■□□□□ 0.69
LRRK1-202ENST00000525284 DIEXFQ68CQ4 756 aaKnown RBP19.27■□□□□ 0.68
LRRK1-202ENST00000525284 SLC24A1O60721 1099 aa19.25■□□□□ 0.67
LRRK1-202ENST00000525284 GTF3C3Q9Y5Q9 886 aa19.23■□□□□ 0.67
LRRK1-202ENST00000525284 ANP32BQ92688 251 aaKnown RBP19.2■□□□□ 0.66
LRRK1-202ENST00000525284 NPM2Q86SE8 214 aaKnown RBP19.17■□□□□ 0.66
LRRK1-202ENST00000525284 CANXP27824 592 aaKnown RBP19.15■□□□□ 0.66
LRRK1-202ENST00000525284 ANP32AP39687 249 aaKnown RBP19.14■□□□□ 0.65
LRRK1-202ENST00000525284 HSP90AA1P07900 732 aaKnown RBP18.98■□□□□ 0.63
LRRK1-202ENST00000525284 ARXQ96QS3 562 aa18.96■□□□□ 0.63
LRRK1-202ENST00000525284 ANP32CO43423 234 aa18.95■□□□□ 0.62
LRRK1-202ENST00000525284 NEUROD1Q13562 356 aa18.94■□□□□ 0.62
LRRK1-202ENST00000525284 TRIM52Q96A61 297 aa18.9■□□□□ 0.62
LRRK1-202ENST00000525284 ZNF326Q5BKZ1 582 aaKnown RBP18.9■□□□□ 0.62
LRRK1-202ENST00000525284 NBR1Q14596 966 aa18.84■□□□□ 0.61
LRRK1-202ENST00000525284 NEFMP07197 916 aa18.82■□□□□ 0.6
LRRK1-202ENST00000525284 FAM50AQ14320 339 aaKnown RBP18.82■□□□□ 0.6
LRRK1-202ENST00000525284 LOC105371045A0A1W2PR82 267 aa18.81■□□□□ 0.6
LRRK1-202ENST00000525284 CDK11BP21127 795 aaKnown RBP18.76■□□□□ 0.59
LRRK1-202ENST00000525284 UPF2Q9HAU5 1272 aaKnown RBP18.73■□□□□ 0.59
LRRK1-202ENST00000525284 TNNT2P45379 298 aaPredicted RBP18.66■□□□□ 0.58
LRRK1-202ENST00000525284 PLPPR3Q6T4P5 718 aa18.63■□□□□ 0.57
LRRK1-202ENST00000525284 ACIN1Q9UKV3 1341 aaKnown RBP18.63■□□□□ 0.57
LRRK1-202ENST00000525284 FKBP8Q14318 412 aa18.63■□□□□ 0.57
LRRK1-202ENST00000525284 AMER1Q5JTC6 1135 aaPredicted RBP18.51■□□□□ 0.55
LRRK1-202ENST00000525284 TRIM44Q96DX7 344 aaPredicted RBP18.51■□□□□ 0.55
LRRK1-202ENST00000525284 TULP1O00294 542 aaPredicted RBP18.44■□□□□ 0.54
LRRK1-202ENST00000525284 SALL2Q9Y467 1007 aaPredicted RBP18.43■□□□□ 0.54
LRRK1-202ENST00000525284 A0A0G2JS52 829 aa18.43■□□□□ 0.54
LRRK1-202ENST00000525284 DNTTIP2Q5QJE6 756 aaKnown RBP18.4■□□□□ 0.54
LRRK1-202ENST00000525284 CCDC136Q96JN2 1154 aa18.39■□□□□ 0.53
LRRK1-202ENST00000525284 PTMAP06454 111 aaKnown RBP18.37■□□□□ 0.53
LRRK1-202ENST00000525284 NCLP19338 710 aaKnown RBP18.35■□□□□ 0.53
LRRK1-202ENST00000525284 NAP1L5Q96NT1 182 aaPredicted RBP18.35■□□□□ 0.53
LRRK1-202ENST00000525284 HNRNPUQ00839 825 aaKnown RBP eCLIP18.35■□□□□ 0.53
LRRK1-202ENST00000525284 NCBP3Q53F19 620 aaKnown RBP18.34■□□□□ 0.53
LRRK1-202ENST00000525284 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.34■□□□□ 0.53
LRRK1-202ENST00000525284 FAM9BQ8IZU0 186 aa18.33■□□□□ 0.53
LRRK1-202ENST00000525284 RTN4Q9NQC3 1192 aaKnown RBP18.33■□□□□ 0.53
LRRK1-202ENST00000525284 TPRNQ4KMQ1 711 aa18.32■□□□□ 0.52
LRRK1-202ENST00000525284 SCAF1Q9H7N4 1312 aaKnown RBP18.28■□□□□ 0.52
LRRK1-202ENST00000525284 PLEKHG5O94827 1062 aa18.25■□□□□ 0.51
LRRK1-202ENST00000525284 ZRSR1Q15695 479 aaKnown RBP18.24■□□□□ 0.51
LRRK1-202ENST00000525284 GOLGA6L22H0YM25 854 aa18.22■□□□□ 0.51
LRRK1-202ENST00000525284 IRX6P78412 446 aaPredicted RBP18.2■□□□□ 0.5
LRRK1-202ENST00000525284 BECN1Q14457 450 aa18.19■□□□□ 0.5
LRRK1-202ENST00000525284 ANP32EQ9BTT0 268 aa18.18■□□□□ 0.5
LRRK1-202ENST00000525284 ERICH6BQ5W0A0 696 aa18.17■□□□□ 0.5
LRRK1-202ENST00000525284 MYH16Q9H6N6 1097 aa18.17■□□□□ 0.5
LRRK1-202ENST00000525284 PLCB2Q00722 1185 aa18.15■□□□□ 0.5
LRRK1-202ENST00000525284 DDRGK1Q96HY6 314 aa18.15■□□□□ 0.5
LRRK1-202ENST00000525284 FBLN2P98095 1184 aa18.11■□□□□ 0.49
LRRK1-202ENST00000525284 CHGAP10645 457 aaKnown RBP18.11■□□□□ 0.49
LRRK1-202ENST00000525284 ARID3CA6NKF2 412 aa18.09■□□□□ 0.49
LRRK1-202ENST00000525284 DDX10Q13206 875 aaKnown RBP18.08■□□□□ 0.49
LRRK1-202ENST00000525284 TMC1Q8TDI8 760 aa18.08■□□□□ 0.48
LRRK1-202ENST00000525284 WDR43Q15061 677 aaKnown RBP eCLIP18.07■□□□□ 0.48
LRRK1-202ENST00000525284 TAOK2Q9UL54 1235 aa18.07■□□□□ 0.48
LRRK1-202ENST00000525284 ZBTB7CA1YPR0 619 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms