RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
EXTL3-214ENST00000523271 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
EXTL3-214ENST00000523271 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
EXTL3-214ENST00000523271 LCE1AQ5T7P2 110 aa3.48□□□□□ -1.85
EXTL3-214ENST00000523271 MUC17Q685J3 4493 aa3.39□□□□□ -1.87
EXTL3-214ENST00000523271 LRP2P98164 4655 aa3.39□□□□□ -1.87
EXTL3-214ENST00000523271 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
EXTL3-214ENST00000523271 PCLOQ9Y6V0 5065 aa3.37□□□□□ -1.87
EXTL3-214ENST00000523271 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
EXTL3-214ENST00000523271 KRTAP4-9Q9BYQ8 210 aa3.34□□□□□ -1.87
EXTL3-214ENST00000523271 HERC1Q15751 4861 aa3.33□□□□□ -1.88
EXTL3-214ENST00000523271 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
EXTL3-214ENST00000523271 KRTAP19-7Q3SYF9 63 aa3.29□□□□□ -1.88
EXTL3-214ENST00000523271 KMT2CQ8NEZ4 4911 aaKnown RBP3.28□□□□□ -1.88
EXTL3-214ENST00000523271 KIAA1109Q2LD37 5005 aa3.27□□□□□ -1.89
EXTL3-214ENST00000523271 HERC2O95714 4834 aa3.24□□□□□ -1.89
EXTL3-214ENST00000523271 KRTAP9-2Q9BYQ4 174 aa3.23□□□□□ -1.89
EXTL3-214ENST00000523271 HYDINQ4G0P3 5121 aa3.22□□□□□ -1.89
EXTL3-214ENST00000523271 LCE4AQ5TA78 99 aa3.21□□□□□ -1.9
EXTL3-214ENST00000523271 KRTAP9-4Q9BYQ2 154 aa3.2□□□□□ -1.9
EXTL3-214ENST00000523271 SYNE2Q8WXH0 6885 aaKnown RBP3.18□□□□□ -1.9
EXTL3-214ENST00000523271 LCE2AQ5TA79 106 aaPredicted RBP3.16□□□□□ -1.9
EXTL3-214ENST00000523271 KRTAP2-2Q9BYT5 123 aa3.14□□□□□ -1.91
EXTL3-214ENST00000523271 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
EXTL3-214ENST00000523271 BIRC6Q9NR09 4857 aa3.11□□□□□ -1.91
EXTL3-214ENST00000523271 KRTAP9-7A8MTY7 169 aa3.08□□□□□ -1.92
EXTL3-214ENST00000523271 KRTAP9-6A0A140TA67 174 aa3.05□□□□□ -1.92
EXTL3-214ENST00000523271 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
EXTL3-214ENST00000523271 KRTAP6-3Q3LI67 103 aa3.02□□□□□ -1.93
EXTL3-214ENST00000523271 HMCN2Q8NDA2 5059 aa2.92□□□□□ -1.94
EXTL3-214ENST00000523271 RNF213Q63HN8 5207 aa2.92□□□□□ -1.94
EXTL3-214ENST00000523271 EPPK1P58107 5090 aaKnown RBP2.91□□□□□ -1.94
EXTL3-214ENST00000523271 KRTAP9-6A8MVA2 160 aa2.9□□□□□ -1.95
EXTL3-214ENST00000523271 SYNE1Q8NF91 8797 aaKnown RBP2.88□□□□□ -1.95
EXTL3-214ENST00000523271 KRTAP4-11Q9BYQ6 195 aa2.85□□□□□ -1.95
EXTL3-214ENST00000523271 FAT4Q6V0I7 4981 aa2.79□□□□□ -1.96
EXTL3-214ENST00000523271 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
EXTL3-214ENST00000523271 ABCA13Q86UQ4 5058 aa2.76□□□□□ -1.97
EXTL3-214ENST00000523271 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.71□□□□□ -1.98
EXTL3-214ENST00000523271 KRTAP5-9P26371 169 aa2.71□□□□□ -1.98
EXTL3-214ENST00000523271 UBR4Q5T4S7 5183 aa2.71□□□□□ -1.98
EXTL3-214ENST00000523271 FSIP2Q5CZC0 6907 aa2.68□□□□□ -1.98
EXTL3-214ENST00000523271 MUC2Q02817 5179 aa2.6□□□□□ -1.99
EXTL3-214ENST00000523271 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
EXTL3-214ENST00000523271 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
EXTL3-214ENST00000523271 KRTAP5-4Q6L8H1 288 aa2.41□□□□□ -2.02
EXTL3-214ENST00000523271 KRTAP4-6Q9BYQ5 205 aa2.4□□□□□ -2.03
EXTL3-214ENST00000523271 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
EXTL3-214ENST00000523271 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
EXTL3-214ENST00000523271 NEBP20929 6669 aa2.38□□□□□ -2.03
EXTL3-214ENST00000523271 KRTAP5-5Q701N2 237 aaPredicted RBP2.31□□□□□ -2.04
EXTL3-214ENST00000523271 USH2AO75445 5202 aa2.29□□□□□ -2.04
EXTL3-214ENST00000523271 MDN1Q9NU22 5596 aa2.26□□□□□ -2.05
EXTL3-214ENST00000523271 KMT2DO14686 5537 aa2.26□□□□□ -2.05
EXTL3-214ENST00000523271 SSPOA2VEC9 5147 aa2.23□□□□□ -2.05
EXTL3-214ENST00000523271 FCGBPQ9Y6R7 5405 aaPredicted RBP2.21□□□□□ -2.06
EXTL3-214ENST00000523271 MACF1Q9UPN3 7388 aaKnown RBP2.2□□□□□ -2.06
EXTL3-214ENST00000523271 DSTQ03001 7570 aaKnown RBP2.2□□□□□ -2.06
EXTL3-214ENST00000523271 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
EXTL3-214ENST00000523271 KRTAP5-3Q6L8H2 238 aa2.09□□□□□ -2.07
EXTL3-214ENST00000523271 MUC5ACP98088 5654 aa2.03□□□□□ -2.08
EXTL3-214ENST00000523271 MUC12Q9UKN1 5478 aa2.01□□□□□ -2.09
EXTL3-214ENST00000523271 GPR98Q8WXG9 6306 aa1.96□□□□□ -2.1
EXTL3-214ENST00000523271 KRTAP5-2Q701N4 177 aa1.96□□□□□ -2.1
EXTL3-214ENST00000523271 KRTAP5-10Q6L8G5 202 aa1.93□□□□□ -2.1
EXTL3-214ENST00000523271 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
EXTL3-214ENST00000523271 KRTAP5-11Q6L8G4 156 aa1.85□□□□□ -2.11
EXTL3-214ENST00000523271 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
EXTL3-214ENST00000523271 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.81□□□□□ -2.12
EXTL3-214ENST00000523271 AHNAK2Q8IVF2 5795 aa1.8□□□□□ -2.12
EXTL3-214ENST00000523271 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
EXTL3-214ENST00000523271 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
EXTL3-214ENST00000523271 KRTAP5-1Q6L8H4 278 aa1.66□□□□□ -2.14
EXTL3-214ENST00000523271 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
EXTL3-214ENST00000523271 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
EXTL3-214ENST00000523271 AHNAKQ09666 5890 aaKnown RBP1.53□□□□□ -2.17
EXTL3-214ENST00000523271 KRTAP5-7Q6L8G8 165 aa1.5□□□□□ -2.17
EXTL3-214ENST00000523271 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 33 ms