RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 PELP1Q8IZL8 1130 aaKnown RBP20.73■□□□□ 0.91
EXTL3-214ENST00000523271 DCAF8L2P0C7V8 631 aa20.03■□□□□ 0.8
EXTL3-214ENST00000523271 ERICH6Q7L0X2 663 aa19.78■□□□□ 0.76
EXTL3-214ENST00000523271 CCER1Q8TC90 406 aaPredicted RBP19.74■□□□□ 0.75
EXTL3-214ENST00000523271 MYT1Q01538 1121 aa19.57■□□□□ 0.72
EXTL3-214ENST00000523271 APLP2Q06481 763 aa19.2■□□□□ 0.66
EXTL3-214ENST00000523271 CENPBP07199 599 aaPredicted RBP19.16■□□□□ 0.66
EXTL3-214ENST00000523271 FAM9AQ8IZU1 332 aaPredicted RBP19.1■□□□□ 0.65
EXTL3-214ENST00000523271 YTHDC1Q96MU7 727 aaKnown RBP19.08■□□□□ 0.64
EXTL3-214ENST00000523271 SUPT5HO00267 1087 aaKnown RBP19.02■□□□□ 0.64
EXTL3-214ENST00000523271 NEFLP07196 543 aa18.93■□□□□ 0.62
EXTL3-214ENST00000523271 NISCHQ9Y2I1 1504 aa18.87■□□□□ 0.61
EXTL3-214ENST00000523271 EHMT2Q96KQ7 1210 aa18.82■□□□□ 0.6
EXTL3-214ENST00000523271 DAXXQ9UER7 740 aaPredicted RBP18.8■□□□□ 0.6
EXTL3-214ENST00000523271 ZEB1P37275 1124 aaPredicted RBP18.67■□□□□ 0.58
EXTL3-214ENST00000523271 TTBK1Q5TCY1 1321 aaPredicted RBP18.6■□□□□ 0.57
EXTL3-214ENST00000523271 PCGF6Q9BYE7 350 aa18.49■□□□□ 0.55
EXTL3-214ENST00000523271 RTL5Q5HYW3 569 aaPredicted RBP18.28■□□□□ 0.52
EXTL3-214ENST00000523271 ZNF316A6NFI3 1004 aaPredicted RBP18.25■□□□□ 0.51
EXTL3-214ENST00000523271 SHROOM4Q9ULL8 1493 aa18.25■□□□□ 0.51
EXTL3-214ENST00000523271 ATP1B4Q9UN42 357 aaPredicted RBP18.13■□□□□ 0.49
EXTL3-214ENST00000523271 CLSPNQ9HAW4 1339 aa17.98■□□□□ 0.47
EXTL3-214ENST00000523271 RANGAP1P46060 587 aaPredicted RBP17.97■□□□□ 0.47
EXTL3-214ENST00000523271 POLR3GLQ9BT43 218 aa17.78■□□□□ 0.44
EXTL3-214ENST00000523271 UBTFP17480 764 aaKnown RBP17.77■□□□□ 0.44
EXTL3-214ENST00000523271 GLIPR1L2Q4G1C9 344 aa17.7■□□□□ 0.42
EXTL3-214ENST00000523271 TRIM41Q8WV44 630 aa17.69■□□□□ 0.42
EXTL3-214ENST00000523271 ZBTB47Q9UFB7 747 aaPredicted RBP17.68■□□□□ 0.42
EXTL3-214ENST00000523271 MYT1LQ9UL68 1186 aa17.68■□□□□ 0.42
EXTL3-214ENST00000523271 SLC4A1APQ9BWU0 796 aaKnown RBP17.65■□□□□ 0.42
EXTL3-214ENST00000523271 ANP32BQ92688 251 aaKnown RBP17.55■□□□□ 0.4
EXTL3-214ENST00000523271 CDK11AQ9UQ88 783 aaPredicted RBP17.46■□□□□ 0.39
EXTL3-214ENST00000523271 CNGB1Q14028 1251 aaPredicted RBP17.46■□□□□ 0.39
EXTL3-214ENST00000523271 TRIM26Q12899 539 aaPredicted RBP17.45■□□□□ 0.38
EXTL3-214ENST00000523271 EIF5BO60841 1220 aaKnown RBP17.43■□□□□ 0.38
EXTL3-214ENST00000523271 HRCP23327 699 aa17.41■□□□□ 0.38
EXTL3-214ENST00000523271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.36■□□□□ 0.37
EXTL3-214ENST00000523271 HNRNPUL2Q1KMD3 747 aaKnown RBP17.36■□□□□ 0.37
EXTL3-214ENST00000523271 CHIC1Q5VXU3 224 aa17.33■□□□□ 0.36
EXTL3-214ENST00000523271 ITGAEP38570 1179 aa17.32■□□□□ 0.36
EXTL3-214ENST00000523271 ANP32AP39687 249 aaKnown RBP17.32■□□□□ 0.36
EXTL3-214ENST00000523271 CANXP27824 592 aaKnown RBP17.28■□□□□ 0.36
EXTL3-214ENST00000523271 NEFMP07197 916 aa17.25■□□□□ 0.35
EXTL3-214ENST00000523271 DIEXFQ68CQ4 756 aaKnown RBP17.22■□□□□ 0.35
EXTL3-214ENST00000523271 PPARGC1BQ86YN6 1023 aaKnown RBP17.21■□□□□ 0.35
EXTL3-214ENST00000523271 SLC24A1O60721 1099 aa17.2■□□□□ 0.34
EXTL3-214ENST00000523271 HSP90AA1P07900 732 aaKnown RBP17.19■□□□□ 0.34
EXTL3-214ENST00000523271 CDK11BP21127 795 aaKnown RBP17.17■□□□□ 0.34
EXTL3-214ENST00000523271 BCL11AQ9H165 835 aa17.11■□□□□ 0.33
EXTL3-214ENST00000523271 ANP32CO43423 234 aa17.09■□□□□ 0.33
EXTL3-214ENST00000523271 BCANQ96GW7 911 aa17.09■□□□□ 0.33
EXTL3-214ENST00000523271 UPF2Q9HAU5 1272 aaKnown RBP17.09■□□□□ 0.33
EXTL3-214ENST00000523271 TNNT2P45379 298 aaPredicted RBP17.07■□□□□ 0.32
EXTL3-214ENST00000523271 GTF3C3Q9Y5Q9 886 aa16.98■□□□□ 0.31
EXTL3-214ENST00000523271 NPM2Q86SE8 214 aaKnown RBP16.96■□□□□ 0.31
EXTL3-214ENST00000523271 TRIM52Q96A61 297 aa16.89■□□□□ 0.29
EXTL3-214ENST00000523271 FAM50AQ14320 339 aaKnown RBP16.83■□□□□ 0.29
EXTL3-214ENST00000523271 NEUROD1Q13562 356 aa16.79■□□□□ 0.28
EXTL3-214ENST00000523271 ZNF326Q5BKZ1 582 aaKnown RBP16.77■□□□□ 0.28
EXTL3-214ENST00000523271 TRIM44Q96DX7 344 aaPredicted RBP16.77■□□□□ 0.28
EXTL3-214ENST00000523271 ANP32EQ9BTT0 268 aa16.74■□□□□ 0.27
EXTL3-214ENST00000523271 ARXQ96QS3 562 aa16.7■□□□□ 0.26
EXTL3-214ENST00000523271 NCLP19338 710 aaKnown RBP16.68■□□□□ 0.26
EXTL3-214ENST00000523271 NBR1Q14596 966 aa16.68■□□□□ 0.26
EXTL3-214ENST00000523271 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.67■□□□□ 0.26
EXTL3-214ENST00000523271 ZRSR1Q15695 479 aaKnown RBP16.63■□□□□ 0.25
EXTL3-214ENST00000523271 GOLGA6L22H0YM25 854 aa16.61■□□□□ 0.25
EXTL3-214ENST00000523271 DNTTIP2Q5QJE6 756 aaKnown RBP16.58■□□□□ 0.24
EXTL3-214ENST00000523271 MYH16Q9H6N6 1097 aa16.58■□□□□ 0.24
EXTL3-214ENST00000523271 BECN1Q14457 450 aa16.57■□□□□ 0.24
EXTL3-214ENST00000523271 PTMAP06454 111 aaKnown RBP16.55■□□□□ 0.24
EXTL3-214ENST00000523271 ACIN1Q9UKV3 1341 aaKnown RBP16.54■□□□□ 0.24
EXTL3-214ENST00000523271 DDRGK1Q96HY6 314 aa16.53■□□□□ 0.24
EXTL3-214ENST00000523271 FKBP8Q14318 412 aa16.51■□□□□ 0.23
EXTL3-214ENST00000523271 GOLGA6L6A8MZA4 724 aa16.5■□□□□ 0.23
EXTL3-214ENST00000523271 CCDC136Q96JN2 1154 aa16.5■□□□□ 0.23
EXTL3-214ENST00000523271 ERICH6BQ5W0A0 696 aa16.49■□□□□ 0.23
EXTL3-214ENST00000523271 LOC105371045A0A1W2PR82 267 aa16.45■□□□□ 0.22
EXTL3-214ENST00000523271 NRDCO43847 1150 aa16.43■□□□□ 0.22
EXTL3-214ENST00000523271 NAP1L5Q96NT1 182 aaPredicted RBP16.41■□□□□ 0.22
EXTL3-214ENST00000523271 ESF1Q9H501 851 aaKnown RBP16.4■□□□□ 0.22
EXTL3-214ENST00000523271 CHAF1AQ13111 956 aaPredicted RBP16.39■□□□□ 0.21
EXTL3-214ENST00000523271 L1TD1Q5T7N2 865 aaKnown RBP16.38■□□□□ 0.21
EXTL3-214ENST00000523271 CASC1Q6TDU7 716 aa16.38■□□□□ 0.21
EXTL3-214ENST00000523271 HNRNPUQ00839 825 aaKnown RBP eCLIP16.37■□□□□ 0.21
EXTL3-214ENST00000523271 CCDC180Q9P1Z9 1646 aa16.33■□□□□ 0.2
EXTL3-214ENST00000523271 WDR43Q15061 677 aaKnown RBP eCLIP16.33■□□□□ 0.2
EXTL3-214ENST00000523271 TULP1O00294 542 aaPredicted RBP16.33■□□□□ 0.2
EXTL3-214ENST00000523271 STAG3Q9UJ98 1225 aa16.32■□□□□ 0.2
EXTL3-214ENST00000523271 TMC1Q8TDI8 760 aa16.29■□□□□ 0.2
EXTL3-214ENST00000523271 FAM9BQ8IZU0 186 aa16.27■□□□□ 0.2
EXTL3-214ENST00000523271 TONSLQ96HA7 1378 aa16.25■□□□□ 0.19
EXTL3-214ENST00000523271 AMER1Q5JTC6 1135 aaPredicted RBP16.23■□□□□ 0.19
EXTL3-214ENST00000523271 PPM1GO15355 546 aaPredicted RBP16.21■□□□□ 0.19
EXTL3-214ENST00000523271 SALL2Q9Y467 1007 aaPredicted RBP16.2■□□□□ 0.18
EXTL3-214ENST00000523271 TNNT3P45378 269 aaPredicted RBP16.19■□□□□ 0.18
EXTL3-214ENST00000523271 KIAA2012Q0VF49 1180 aa16.18■□□□□ 0.18
EXTL3-214ENST00000523271 MSNP26038 577 aaKnown RBP16.18■□□□□ 0.18
EXTL3-214ENST00000523271 PLCB2Q00722 1185 aa16.18■□□□□ 0.18
EXTL3-214ENST00000523271 A0A0G2JS52 829 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms