RNA–Protein interactions for RNA: ENST00000515393.5

MCTP1-218, Transcript of multiple C2 and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCTP1, Length 5,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCTP1-218ENST00000515393 SYNE1Q8NF91 8797 aaKnown RBP5.81□□□□□ -1.48
MCTP1-218ENST00000515393 MT3P25713 68 aa5.78□□□□□ -1.48
MCTP1-218ENST00000515393 FAT4Q6V0I7 4981 aa5.76□□□□□ -1.49
MCTP1-218ENST00000515393 RNF213Q63HN8 5207 aa5.7□□□□□ -1.5
MCTP1-218ENST00000515393 LOC100996750A0A140TA64 210 aa5.68□□□□□ -1.5
MCTP1-218ENST00000515393 KRTAP4-3Q9BYR4 195 aa5.66□□□□□ -1.5
MCTP1-218ENST00000515393 HMCN2Q8NDA2 5059 aa5.65□□□□□ -1.51
MCTP1-218ENST00000515393 KRTAP2-3P0C7H8 128 aa5.64□□□□□ -1.51
MCTP1-218ENST00000515393 KRTAP2-4Q9BYR9 128 aa5.64□□□□□ -1.51
MCTP1-218ENST00000515393 KRTAP2-1Q9BYU5 128 aa5.64□□□□□ -1.51
MCTP1-218ENST00000515393 MUC2Q02817 5179 aa5.63□□□□□ -1.51
MCTP1-218ENST00000515393 KRTAP19-7Q3SYF9 63 aa5.61□□□□□ -1.51
MCTP1-218ENST00000515393 LCE2DQ5TA82 110 aaPredicted RBP5.6□□□□□ -1.51
MCTP1-218ENST00000515393 PRM1P04553 51 aa5.57□□□□□ -1.52
MCTP1-218ENST00000515393 MT1AP04731 61 aa5.57□□□□□ -1.52
MCTP1-218ENST00000515393 LCE2AQ5TA79 106 aaPredicted RBP5.49□□□□□ -1.53
MCTP1-218ENST00000515393 SYNE2Q8WXH0 6885 aaKnown RBP5.44□□□□□ -1.54
MCTP1-218ENST00000515393 MT4P47944 62 aa5.42□□□□□ -1.54
MCTP1-218ENST00000515393 KRTAP9-2Q9BYQ4 174 aa5.38□□□□□ -1.55
MCTP1-218ENST00000515393 KRTAP4-9Q9BYQ8 210 aa5.31□□□□□ -1.56
MCTP1-218ENST00000515393 LCE1AQ5T7P2 110 aa5.3□□□□□ -1.56
MCTP1-218ENST00000515393 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
MCTP1-218ENST00000515393 LCE1BQ5T7P3 118 aa5.17□□□□□ -1.58
MCTP1-218ENST00000515393 FCGBPQ9Y6R7 5405 aaPredicted RBP5.16□□□□□ -1.58
MCTP1-218ENST00000515393 LCE1DQ5T752 114 aa5.16□□□□□ -1.58
MCTP1-218ENST00000515393 KRTAP9-6A8MVA2 160 aa5.12□□□□□ -1.59
MCTP1-218ENST00000515393 LCE5AQ5TCM9 118 aa5.11□□□□□ -1.59
MCTP1-218ENST00000515393 KRTAP9-4Q9BYQ2 154 aa5.1□□□□□ -1.59
MCTP1-218ENST00000515393 KRTAP6-1Q3LI64 71 aa5.05□□□□□ -1.6
MCTP1-218ENST00000515393 DSTQ03001 7570 aaKnown RBP5.04□□□□□ -1.6
MCTP1-218ENST00000515393 USH2AO75445 5202 aa5.04□□□□□ -1.6
MCTP1-218ENST00000515393 KRTAP6-3Q3LI67 103 aa5.03□□□□□ -1.6
MCTP1-218ENST00000515393 KMT2DO14686 5537 aa5.03□□□□□ -1.6
MCTP1-218ENST00000515393 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
MCTP1-218ENST00000515393 KRTAP6-2Q3LI66 62 aa4.97□□□□□ -1.61
MCTP1-218ENST00000515393 KRTAP9-6A0A140TA67 174 aa4.93□□□□□ -1.62
MCTP1-218ENST00000515393 KRTAP20-1Q3LI63 56 aa4.85□□□□□ -1.63
MCTP1-218ENST00000515393 KRTAP9-7A8MTY7 169 aa4.73□□□□□ -1.65
MCTP1-218ENST00000515393 MACF1Q9UPN3 7388 aaKnown RBP4.69□□□□□ -1.66
MCTP1-218ENST00000515393 KRTAP2-2Q9BYT5 123 aa4.67□□□□□ -1.66
MCTP1-218ENST00000515393 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.64□□□□□ -1.67
MCTP1-218ENST00000515393 MUC12Q9UKN1 5478 aa4.6□□□□□ -1.67
MCTP1-218ENST00000515393 SSPOA2VEC9 5147 aa4.49□□□□□ -1.69
MCTP1-218ENST00000515393 KRTAP5-9P26371 169 aa4.41□□□□□ -1.7
MCTP1-218ENST00000515393 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
MCTP1-218ENST00000515393 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
MCTP1-218ENST00000515393 LCE1FQ5T754 118 aa4.3□□□□□ -1.72
MCTP1-218ENST00000515393 MDN1Q9NU22 5596 aa4.28□□□□□ -1.72
MCTP1-218ENST00000515393 NEBP20929 6669 aa4.22□□□□□ -1.73
MCTP1-218ENST00000515393 MUC19Q7Z5P9 8384 aa4.21□□□□□ -1.74
MCTP1-218ENST00000515393 KRTAP4-6Q9BYQ5 205 aa4.15□□□□□ -1.74
MCTP1-218ENST00000515393 KRTAP9-9Q9BYP9 154 aa4.12□□□□□ -1.75
MCTP1-218ENST00000515393 KRTAP20-2Q3LI61 65 aa4.1□□□□□ -1.75
MCTP1-218ENST00000515393 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
MCTP1-218ENST00000515393 KRTAP5-4Q6L8H1 288 aa3.93□□□□□ -1.78
MCTP1-218ENST00000515393 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
MCTP1-218ENST00000515393 KRTAP4-4Q9BYR3 166 aa3.8□□□□□ -1.8
MCTP1-218ENST00000515393 KRTAP4-12Q9BQ66 201 aa3.71□□□□□ -1.82
MCTP1-218ENST00000515393 KRTAP4-2Q9BYR5 136 aa3.71□□□□□ -1.82
MCTP1-218ENST00000515393 GPR98Q8WXG9 6306 aa3.62□□□□□ -1.83
MCTP1-218ENST00000515393 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
MCTP1-218ENST00000515393 HMCN1Q96RW7 5635 aa3.44□□□□□ -1.86
MCTP1-218ENST00000515393 KRTAP5-3Q6L8H2 238 aa3.4□□□□□ -1.86
MCTP1-218ENST00000515393 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
MCTP1-218ENST00000515393 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.9
MCTP1-218ENST00000515393 AHNAK2Q8IVF2 5795 aa3.11□□□□□ -1.91
MCTP1-218ENST00000515393 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
MCTP1-218ENST00000515393 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
MCTP1-218ENST00000515393 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
MCTP1-218ENST00000515393 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
MCTP1-218ENST00000515393 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
MCTP1-218ENST00000515393 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
MCTP1-218ENST00000515393 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.98
MCTP1-218ENST00000515393 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
MCTP1-218ENST00000515393 PHGR1C9JFL3 82 aa2.55□□□□□ -2
MCTP1-218ENST00000515393 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
MCTP1-218ENST00000515393 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms