RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 MT4P47944 62 aa5.1□□□□□ -1.59
TRIM41-207ENST00000515223 HMCN2Q8NDA2 5059 aa5.07□□□□□ -1.6
TRIM41-207ENST00000515223 KRTAP19-6Q3LI70 58 aa5.05□□□□□ -1.6
TRIM41-207ENST00000515223 SYNE1Q8NF91 8797 aaKnown RBP5.04□□□□□ -1.6
TRIM41-207ENST00000515223 MT1MQ8N339 61 aa5.01□□□□□ -1.61
TRIM41-207ENST00000515223 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
TRIM41-207ENST00000515223 MUC2Q02817 5179 aa4.99□□□□□ -1.61
TRIM41-207ENST00000515223 FAT4Q6V0I7 4981 aa4.97□□□□□ -1.61
TRIM41-207ENST00000515223 KRTAP4-3Q9BYR4 195 aa4.94□□□□□ -1.62
TRIM41-207ENST00000515223 KRTAP9-6A0A140TA67 174 aa4.93□□□□□ -1.62
TRIM41-207ENST00000515223 UBR4Q5T4S7 5183 aa4.91□□□□□ -1.62
TRIM41-207ENST00000515223 LCE1BQ5T7P3 118 aa4.9□□□□□ -1.62
TRIM41-207ENST00000515223 RNF213Q63HN8 5207 aa4.9□□□□□ -1.63
TRIM41-207ENST00000515223 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
TRIM41-207ENST00000515223 KRTAP19-7Q3SYF9 63 aa4.85□□□□□ -1.63
TRIM41-207ENST00000515223 KRTAP2-3P0C7H8 128 aa4.79□□□□□ -1.64
TRIM41-207ENST00000515223 KRTAP2-4Q9BYR9 128 aa4.79□□□□□ -1.64
TRIM41-207ENST00000515223 KRTAP2-1Q9BYU5 128 aa4.79□□□□□ -1.64
TRIM41-207ENST00000515223 KRTAP9-6A8MVA2 160 aa4.78□□□□□ -1.64
TRIM41-207ENST00000515223 KRTAP20-1Q3LI63 56 aa4.77□□□□□ -1.65
TRIM41-207ENST00000515223 PRM1P04553 51 aa4.74□□□□□ -1.65
TRIM41-207ENST00000515223 LCE2AQ5TA79 106 aaPredicted RBP4.74□□□□□ -1.65
TRIM41-207ENST00000515223 MT1AP04731 61 aa4.7□□□□□ -1.66
TRIM41-207ENST00000515223 KRTAP4-9Q9BYQ8 210 aa4.7□□□□□ -1.66
TRIM41-207ENST00000515223 FSIP2Q5CZC0 6907 aa4.69□□□□□ -1.66
TRIM41-207ENST00000515223 KRTAP9-7A8MTY7 169 aa4.67□□□□□ -1.66
TRIM41-207ENST00000515223 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
TRIM41-207ENST00000515223 LCE1AQ5T7P2 110 aa4.6□□□□□ -1.67
TRIM41-207ENST00000515223 KRTAP6-3Q3LI67 103 aa4.58□□□□□ -1.68
TRIM41-207ENST00000515223 SYNE2Q8WXH0 6885 aaKnown RBP4.52□□□□□ -1.69
TRIM41-207ENST00000515223 KMT2DO14686 5537 aa4.48□□□□□ -1.69
TRIM41-207ENST00000515223 OBSCNQ5VST9 7968 aa4.47□□□□□ -1.69
TRIM41-207ENST00000515223 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
TRIM41-207ENST00000515223 KRTAP2-2Q9BYT5 123 aa4.41□□□□□ -1.7
TRIM41-207ENST00000515223 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.41□□□□□ -1.7
TRIM41-207ENST00000515223 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
TRIM41-207ENST00000515223 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.71
TRIM41-207ENST00000515223 KRTAP9-4Q9BYQ2 154 aa4.3□□□□□ -1.72
TRIM41-207ENST00000515223 LCE1CQ5T751 118 aa4.28□□□□□ -1.72
TRIM41-207ENST00000515223 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
TRIM41-207ENST00000515223 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
TRIM41-207ENST00000515223 USH2AO75445 5202 aa4.27□□□□□ -1.73
TRIM41-207ENST00000515223 FCGBPQ9Y6R7 5405 aaPredicted RBP4.25□□□□□ -1.73
TRIM41-207ENST00000515223 DSTQ03001 7570 aaKnown RBP4.1□□□□□ -1.75
TRIM41-207ENST00000515223 MACF1Q9UPN3 7388 aaKnown RBP4.01□□□□□ -1.77
TRIM41-207ENST00000515223 KRTAP9-9Q9BYP9 154 aa3.99□□□□□ -1.77
TRIM41-207ENST00000515223 SSPOA2VEC9 5147 aa3.94□□□□□ -1.78
TRIM41-207ENST00000515223 MUC12Q9UKN1 5478 aa3.93□□□□□ -1.78
TRIM41-207ENST00000515223 GPR98Q8WXG9 6306 aa3.8□□□□□ -1.8
TRIM41-207ENST00000515223 NEBP20929 6669 aa3.78□□□□□ -1.8
TRIM41-207ENST00000515223 KRTAP5-9P26371 169 aa3.71□□□□□ -1.82
TRIM41-207ENST00000515223 MUC19Q7Z5P9 8384 aa3.68□□□□□ -1.82
TRIM41-207ENST00000515223 KRTAP5-5Q701N2 237 aaPredicted RBP3.64□□□□□ -1.83
TRIM41-207ENST00000515223 KRTAP4-6Q9BYQ5 205 aa3.6□□□□□ -1.83
TRIM41-207ENST00000515223 KRTAP20-2Q3LI61 65 aa3.59□□□□□ -1.83
TRIM41-207ENST00000515223 MDN1Q9NU22 5596 aa3.58□□□□□ -1.84
TRIM41-207ENST00000515223 KRTAP4-11Q9BYQ6 195 aa3.55□□□□□ -1.84
TRIM41-207ENST00000515223 KRTAP5-4Q6L8H1 288 aa3.34□□□□□ -1.88
TRIM41-207ENST00000515223 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
TRIM41-207ENST00000515223 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
TRIM41-207ENST00000515223 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
TRIM41-207ENST00000515223 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
TRIM41-207ENST00000515223 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
TRIM41-207ENST00000515223 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
TRIM41-207ENST00000515223 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.96
TRIM41-207ENST00000515223 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
TRIM41-207ENST00000515223 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
TRIM41-207ENST00000515223 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
TRIM41-207ENST00000515223 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
TRIM41-207ENST00000515223 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
TRIM41-207ENST00000515223 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
TRIM41-207ENST00000515223 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
TRIM41-207ENST00000515223 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
TRIM41-207ENST00000515223 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
TRIM41-207ENST00000515223 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
TRIM41-207ENST00000515223 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
TRIM41-207ENST00000515223 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
TRIM41-207ENST00000515223 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 77.7 ms