RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 KRTAP4-7Q9BYR0 210 aa2.35□□□□□ -2.03
KDM3B-207ENST00000510866 SPRR5A0A1B0GTR4 108 aa2.35□□□□□ -2.03
KDM3B-207ENST00000510866 MT4P47944 62 aa2.33□□□□□ -2.04
KDM3B-207ENST00000510866 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
KDM3B-207ENST00000510866 MT1MQ8N339 61 aa2.3□□□□□ -2.04
KDM3B-207ENST00000510866 FAT4Q6V0I7 4981 aa2.29□□□□□ -2.04
KDM3B-207ENST00000510866 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
KDM3B-207ENST00000510866 KRTAP4-3Q9BYR4 195 aa2.24□□□□□ -2.05
KDM3B-207ENST00000510866 RNF213Q63HN8 5207 aa2.24□□□□□ -2.05
KDM3B-207ENST00000510866 LOC100996750A0A140TA64 210 aa2.24□□□□□ -2.05
KDM3B-207ENST00000510866 PRM1P04553 51 aa2.24□□□□□ -2.05
KDM3B-207ENST00000510866 KRTAP20-1Q3LI63 56 aa2.23□□□□□ -2.05
KDM3B-207ENST00000510866 KRTAP9-7A8MTY7 169 aa2.22□□□□□ -2.05
KDM3B-207ENST00000510866 HMCN2Q8NDA2 5059 aa2.2□□□□□ -2.06
KDM3B-207ENST00000510866 KRTAP6-3Q3LI67 103 aa2.17□□□□□ -2.06
KDM3B-207ENST00000510866 UBR4Q5T4S7 5183 aa2.17□□□□□ -2.06
KDM3B-207ENST00000510866 KRTAP19-7Q3SYF9 63 aa2.17□□□□□ -2.06
KDM3B-207ENST00000510866 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.15□□□□□ -2.06
KDM3B-207ENST00000510866 FSIP2Q5CZC0 6907 aa2.14□□□□□ -2.07
KDM3B-207ENST00000510866 LCE1DQ5T752 114 aa2.13□□□□□ -2.07
KDM3B-207ENST00000510866 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
KDM3B-207ENST00000510866 KRTAP2-3P0C7H8 128 aa2.12□□□□□ -2.07
KDM3B-207ENST00000510866 KRTAP2-4Q9BYR9 128 aa2.12□□□□□ -2.07
KDM3B-207ENST00000510866 OBSCNQ5VST9 7968 aa2.11□□□□□ -2.07
KDM3B-207ENST00000510866 MT1AP04731 61 aa2.11□□□□□ -2.07
KDM3B-207ENST00000510866 LCE1AQ5T7P2 110 aa2.09□□□□□ -2.07
KDM3B-207ENST00000510866 SYNE2Q8WXH0 6885 aaKnown RBP2.08□□□□□ -2.08
KDM3B-207ENST00000510866 KRTAP4-9Q9BYQ8 210 aa2.05□□□□□ -2.08
KDM3B-207ENST00000510866 KRTAP2-2Q9BYT5 123 aa2.04□□□□□ -2.08
KDM3B-207ENST00000510866 KRTAP2-1Q9BYU5 128 aa2.04□□□□□ -2.08
KDM3B-207ENST00000510866 MUC2Q02817 5179 aa2.04□□□□□ -2.08
KDM3B-207ENST00000510866 LCE4AQ5TA78 99 aa2.03□□□□□ -2.09
KDM3B-207ENST00000510866 LCE5AQ5TCM9 118 aa2.02□□□□□ -2.09
KDM3B-207ENST00000510866 KRTAP6-1Q3LI64 71 aa2□□□□□ -2.09
KDM3B-207ENST00000510866 KRTAP6-2Q3LI66 62 aa1.98□□□□□ -2.09
KDM3B-207ENST00000510866 KRTAP9-4Q9BYQ2 154 aa1.98□□□□□ -2.09
KDM3B-207ENST00000510866 DSTQ03001 7570 aaKnown RBP1.93□□□□□ -2.1
KDM3B-207ENST00000510866 MACF1Q9UPN3 7388 aaKnown RBP1.92□□□□□ -2.1
KDM3B-207ENST00000510866 KRTAP9-6A8MVA2 160 aa1.91□□□□□ -2.1
KDM3B-207ENST00000510866 FCGBPQ9Y6R7 5405 aaPredicted RBP1.87□□□□□ -2.11
KDM3B-207ENST00000510866 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
KDM3B-207ENST00000510866 LCE1EQ5T753 118 aa1.87□□□□□ -2.11
KDM3B-207ENST00000510866 LCE1FQ5T754 118 aa1.87□□□□□ -2.11
KDM3B-207ENST00000510866 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
KDM3B-207ENST00000510866 USH2AO75445 5202 aa1.85□□□□□ -2.11
KDM3B-207ENST00000510866 KRTAP5-9P26371 169 aa1.83□□□□□ -2.12
KDM3B-207ENST00000510866 NEBP20929 6669 aa1.8□□□□□ -2.12
KDM3B-207ENST00000510866 SSPOA2VEC9 5147 aa1.78□□□□□ -2.12
KDM3B-207ENST00000510866 KRTAP9-9Q9BYP9 154 aa1.77□□□□□ -2.13
KDM3B-207ENST00000510866 KMT2DO14686 5537 aa1.76□□□□□ -2.13
KDM3B-207ENST00000510866 GPR98Q8WXG9 6306 aa1.75□□□□□ -2.13
KDM3B-207ENST00000510866 KRTAP4-6Q9BYQ5 205 aa1.74□□□□□ -2.13
KDM3B-207ENST00000510866 KRTAP20-2Q3LI61 65 aa1.71□□□□□ -2.14
KDM3B-207ENST00000510866 MDN1Q9NU22 5596 aa1.7□□□□□ -2.14
KDM3B-207ENST00000510866 MUC12Q9UKN1 5478 aa1.67□□□□□ -2.14
KDM3B-207ENST00000510866 KRTAP4-11Q9BYQ6 195 aa1.64□□□□□ -2.15
KDM3B-207ENST00000510866 KRTAP5-4Q6L8H1 288 aa1.62□□□□□ -2.15
KDM3B-207ENST00000510866 KRTAP4-12Q9BQ66 201 aa1.52□□□□□ -2.17
KDM3B-207ENST00000510866 KRTAP4-2Q9BYR5 136 aa1.52□□□□□ -2.17
KDM3B-207ENST00000510866 KRTAP4-4Q9BYR3 166 aa1.5□□□□□ -2.17
KDM3B-207ENST00000510866 KRTAP5-5Q701N2 237 aaPredicted RBP1.49□□□□□ -2.17
KDM3B-207ENST00000510866 KRTAP5-3Q6L8H2 238 aa1.42□□□□□ -2.18
KDM3B-207ENST00000510866 HMCN1Q96RW7 5635 aa1.41□□□□□ -2.18
KDM3B-207ENST00000510866 AHNAK2Q8IVF2 5795 aa1.38□□□□□ -2.19
KDM3B-207ENST00000510866 MUC5ACP98088 5654 aa1.37□□□□□ -2.19
KDM3B-207ENST00000510866 KRTAP5-8O75690 187 aa1.31□□□□□ -2.2
KDM3B-207ENST00000510866 KRTAP5-2Q701N4 177 aa1.24□□□□□ -2.21
KDM3B-207ENST00000510866 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
KDM3B-207ENST00000510866 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
KDM3B-207ENST00000510866 KRTAP5-10Q6L8G5 202 aa1.14□□□□□ -2.23
KDM3B-207ENST00000510866 MUC5BQ9HC84 5762 aaPredicted RBP1.12□□□□□ -2.23
KDM3B-207ENST00000510866 KRTAP5-1Q6L8H4 278 aa1.1□□□□□ -2.23
KDM3B-207ENST00000510866 KRTAP5-11Q6L8G4 156 aa1.09□□□□□ -2.24
KDM3B-207ENST00000510866 KRTAP5-7Q6L8G8 165 aa1.02□□□□□ -2.25
KDM3B-207ENST00000510866 KRTAP21-2Q3LI59 83 aa1.02□□□□□ -2.25
KDM3B-207ENST00000510866 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.95□□□□□ -2.26
KDM3B-207ENST00000510866 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
KDM3B-207ENST00000510866 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms