RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 DCAF8L2P0C7V8 631 aa12.96□□□□□ -0.33
KDM3B-207ENST00000510866 NISCHQ9Y2I1 1504 aa12.57□□□□□ -0.4
KDM3B-207ENST00000510866 SUPT5HO00267 1087 aaKnown RBP12.03□□□□□ -0.48
KDM3B-207ENST00000510866 SHROOM4Q9ULL8 1493 aa11.99□□□□□ -0.49
KDM3B-207ENST00000510866 EHMT2Q96KQ7 1210 aa11.67□□□□□ -0.54
KDM3B-207ENST00000510866 FAM9AQ8IZU1 332 aaPredicted RBP11.4□□□□□ -0.58
KDM3B-207ENST00000510866 APLP2Q06481 763 aa11.39□□□□□ -0.59
KDM3B-207ENST00000510866 RANGAP1P46060 587 aaPredicted RBP11.25□□□□□ -0.61
KDM3B-207ENST00000510866 TTBK1Q5TCY1 1321 aaPredicted RBP11.21□□□□□ -0.61
KDM3B-207ENST00000510866 TRIM41Q8WV44 630 aa11.17□□□□□ -0.62
KDM3B-207ENST00000510866 ATP1B4Q9UN42 357 aaPredicted RBP11.17□□□□□ -0.62
KDM3B-207ENST00000510866 ABCC9O60706 1549 aa11.06□□□□□ -0.64
KDM3B-207ENST00000510866 UBTFP17480 764 aaKnown RBP11.06□□□□□ -0.64
KDM3B-207ENST00000510866 PELP1Q8IZL8 1130 aaKnown RBP11.04□□□□□ -0.64
KDM3B-207ENST00000510866 PABPN1Q86U42 306 aaKnown RBP eCLIP10.94□□□□□ -0.66
KDM3B-207ENST00000510866 PCGF6Q9BYE7 350 aa10.92□□□□□ -0.66
KDM3B-207ENST00000510866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.84□□□□□ -0.67
KDM3B-207ENST00000510866 HNRNPUL2Q1KMD3 747 aaKnown RBP10.84□□□□□ -0.67
KDM3B-207ENST00000510866 MYT1LQ9UL68 1186 aa10.83□□□□□ -0.68
KDM3B-207ENST00000510866 CCER1Q8TC90 406 aaPredicted RBP10.8□□□□□ -0.68
KDM3B-207ENST00000510866 ERICH6Q7L0X2 663 aa10.77□□□□□ -0.69
KDM3B-207ENST00000510866 PPARGC1BQ86YN6 1023 aaKnown RBP10.76□□□□□ -0.69
KDM3B-207ENST00000510866 ITGAEP38570 1179 aa10.67□□□□□ -0.7
KDM3B-207ENST00000510866 ZEB1P37275 1124 aaPredicted RBP10.67□□□□□ -0.7
KDM3B-207ENST00000510866 CHIC1Q5VXU3 224 aa10.61□□□□□ -0.71
KDM3B-207ENST00000510866 FBLN2P98095 1184 aa10.59□□□□□ -0.71
KDM3B-207ENST00000510866 LOC105371045A0A1W2PR82 267 aa10.58□□□□□ -0.72
KDM3B-207ENST00000510866 MYT1Q01538 1121 aa10.55□□□□□ -0.72
KDM3B-207ENST00000510866 SCRIBQ14160 1630 aa10.53□□□□□ -0.72
KDM3B-207ENST00000510866 POLR3GLQ9BT43 218 aa10.52□□□□□ -0.73
KDM3B-207ENST00000510866 TRIM26Q12899 539 aaPredicted RBP10.5□□□□□ -0.73
KDM3B-207ENST00000510866 CENPBP07199 599 aaPredicted RBP10.49□□□□□ -0.73
KDM3B-207ENST00000510866 FAM50AQ14320 339 aaKnown RBP10.46□□□□□ -0.74
KDM3B-207ENST00000510866 CCDC180Q9P1Z9 1646 aa10.45□□□□□ -0.74
KDM3B-207ENST00000510866 YTHDC1Q96MU7 727 aaKnown RBP10.43□□□□□ -0.74
KDM3B-207ENST00000510866 SLC4A1APQ9BWU0 796 aaKnown RBP10.42□□□□□ -0.74
KDM3B-207ENST00000510866 NEFLP07196 543 aa10.39□□□□□ -0.75
KDM3B-207ENST00000510866 TRIM52Q96A61 297 aa10.39□□□□□ -0.75
KDM3B-207ENST00000510866 CNGB1Q14028 1251 aaPredicted RBP10.38□□□□□ -0.75
KDM3B-207ENST00000510866 ZCCHC6Q5VYS8 1495 aaKnown RBP10.37□□□□□ -0.75
KDM3B-207ENST00000510866 ARID3CA6NKF2 412 aa10.36□□□□□ -0.75
KDM3B-207ENST00000510866 P3H3Q8IVL6 736 aa10.35□□□□□ -0.75
KDM3B-207ENST00000510866 RB1CC1Q8TDY2 1594 aa10.35□□□□□ -0.75
KDM3B-207ENST00000510866 NEUROD1Q13562 356 aa10.25□□□□□ -0.77
KDM3B-207ENST00000510866 CSRNP3Q8WYN3 585 aa10.25□□□□□ -0.77
KDM3B-207ENST00000510866 ZNF777Q9ULD5 760 aaPredicted RBP10.25□□□□□ -0.77
KDM3B-207ENST00000510866 BCANQ96GW7 911 aa10.24□□□□□ -0.77
KDM3B-207ENST00000510866 ZNF326Q5BKZ1 582 aaKnown RBP10.23□□□□□ -0.77
KDM3B-207ENST00000510866 NPM1P06748 294 aaKnown RBP eCLIP10.22□□□□□ -0.77
KDM3B-207ENST00000510866 CDK11AQ9UQ88 783 aaPredicted RBP10.2□□□□□ -0.78
KDM3B-207ENST00000510866 HRCP23327 699 aa10.2□□□□□ -0.78
KDM3B-207ENST00000510866 NACADO15069 1562 aa10.19□□□□□ -0.78
KDM3B-207ENST00000510866 ESF1Q9H501 851 aaKnown RBP10.18□□□□□ -0.78
KDM3B-207ENST00000510866 PLPPR3Q6T4P5 718 aa10.17□□□□□ -0.78
KDM3B-207ENST00000510866 CHMP7Q8WUX9 453 aaPredicted RBP10.15□□□□□ -0.78
KDM3B-207ENST00000510866 STAG3Q9UJ98 1225 aa10.09□□□□□ -0.79
KDM3B-207ENST00000510866 BAZ1BQ9UIG0 1483 aaKnown RBP10.08□□□□□ -0.8
KDM3B-207ENST00000510866 DAXXQ9UER7 740 aaPredicted RBP10.08□□□□□ -0.8
KDM3B-207ENST00000510866 ERCC6Q03468 1493 aa10.07□□□□□ -0.8
KDM3B-207ENST00000510866 CHGAP10645 457 aaKnown RBP10.07□□□□□ -0.8
KDM3B-207ENST00000510866 SLC24A1O60721 1099 aa10.05□□□□□ -0.8
KDM3B-207ENST00000510866 DIEXFQ68CQ4 756 aaKnown RBP10.02□□□□□ -0.8
KDM3B-207ENST00000510866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10□□□□□ -0.818e-9■■□□□ 12.6
KDM3B-207ENST00000510866 ANP32CO43423 234 aa9.99□□□□□ -0.81
KDM3B-207ENST00000510866 CLSPNQ9HAW4 1339 aa9.99□□□□□ -0.81
KDM3B-207ENST00000510866 RSF1Q96T23 1441 aaPredicted RBP9.98□□□□□ -0.81
KDM3B-207ENST00000510866 CHIC2Q9UKJ5 165 aa9.98□□□□□ -0.81
KDM3B-207ENST00000510866 NEFMP07197 916 aa9.97□□□□□ -0.81
KDM3B-207ENST00000510866 KCNH8Q96L42 1107 aa9.97□□□□□ -0.81
KDM3B-207ENST00000510866 MTUS2Q5JR59 1369 aa9.95□□□□□ -0.82
KDM3B-207ENST00000510866 TSPY4P0CV99 314 aa9.95□□□□□ -0.82
KDM3B-207ENST00000510866 TSPY10P0CW01 314 aa9.95□□□□□ -0.82
KDM3B-207ENST00000510866 BAZ1AQ9NRL2 1556 aaPredicted RBP9.92□□□□□ -0.82
KDM3B-207ENST00000510866 WRNQ14191 1432 aaPredicted RBP eCLIP9.92□□□□□ -0.82
KDM3B-207ENST00000510866 ZBTB47Q9UFB7 747 aaPredicted RBP9.91□□□□□ -0.82
KDM3B-207ENST00000510866 TONSLQ96HA7 1378 aa9.9□□□□□ -0.82
KDM3B-207ENST00000510866 PLEKHD1A6NEE1 506 aa9.9□□□□□ -0.82
KDM3B-207ENST00000510866 CANXP27824 592 aaKnown RBP9.9□□□□□ -0.82
KDM3B-207ENST00000510866 DCAF1Q9Y4B6 1507 aa9.89□□□□□ -0.83
KDM3B-207ENST00000510866 CLIP1P30622 1438 aa9.89□□□□□ -0.83
KDM3B-207ENST00000510866 RTL5Q5HYW3 569 aaPredicted RBP9.89□□□□□ -0.83
KDM3B-207ENST00000510866 KIF27Q86VH2 1401 aa9.88□□□□□ -0.83
KDM3B-207ENST00000510866 ARID4BQ4LE39 1312 aaPredicted RBP9.88□□□□□ -0.83
KDM3B-207ENST00000510866 BCL11AQ9H165 835 aa9.88□□□□□ -0.83
KDM3B-207ENST00000510866 ZNF316A6NFI3 1004 aaPredicted RBP9.87□□□□□ -0.83
KDM3B-207ENST00000510866 CECR2Q9BXF3 1484 aa9.86□□□□□ -0.83
KDM3B-207ENST00000510866 GOLGA3Q08378 1498 aa9.86□□□□□ -0.83
KDM3B-207ENST00000510866 SENP3Q9H4L4 574 aaPredicted RBP9.85□□□□□ -0.83
KDM3B-207ENST00000510866 SCAF1Q9H7N4 1312 aaKnown RBP9.85□□□□□ -0.83
KDM3B-207ENST00000510866 KDM2AQ9Y2K7 1162 aa9.84□□□□□ -0.83
KDM3B-207ENST00000510866 EEA1Q15075 1411 aa9.84□□□□□ -0.83
KDM3B-207ENST00000510866 PPP1R15AO75807 674 aaPredicted RBP9.83□□□□□ -0.84
KDM3B-207ENST00000510866 RRP7BPQ9NSQ0 103 aa9.82□□□□□ -0.84
KDM3B-207ENST00000510866 EIF4G1Q04637 1599 aaKnown RBP9.82□□□□□ -0.84
KDM3B-207ENST00000510866 TRHP20396 242 aaPredicted RBP9.82□□□□□ -0.84
KDM3B-207ENST00000510866 SMARCA2P51531 1590 aa9.79□□□□□ -0.84
KDM3B-207ENST00000510866 CFDP1Q9UEE9 299 aaPredicted RBP9.79□□□□□ -0.84
KDM3B-207ENST00000510866 C14orf37Q86TY3 774 aa9.78□□□□□ -0.84
KDM3B-207ENST00000510866 PDS5BQ9NTI5 1447 aa9.77□□□□□ -0.85
KDM3B-207ENST00000510866 PLEKHG5O94827 1062 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms