RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 MT1MQ8N339 61 aa2.25□□□□□ -2.05
SYNPO2-205ENST00000504178 ABCA13Q86UQ4 5058 aa2.24□□□□□ -2.05
SYNPO2-205ENST00000504178 MT3P25713 68 aa2.23□□□□□ -2.05
SYNPO2-205ENST00000504178 KRTAP19-2Q3LHN2 52 aa2.23□□□□□ -2.05
SYNPO2-205ENST00000504178 KRTAP19-6Q3LI70 58 aa2.23□□□□□ -2.05
SYNPO2-205ENST00000504178 LOC100996750A0A140TA64 210 aa2.22□□□□□ -2.05
SYNPO2-205ENST00000504178 PRM1P04553 51 aa2.18□□□□□ -2.06
SYNPO2-205ENST00000504178 KRTAP4-3Q9BYR4 195 aa2.18□□□□□ -2.06
SYNPO2-205ENST00000504178 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
SYNPO2-205ENST00000504178 LCE1DQ5T752 114 aa2.16□□□□□ -2.06
SYNPO2-205ENST00000504178 SYNE2Q8WXH0 6885 aaKnown RBP2.15□□□□□ -2.07
SYNPO2-205ENST00000504178 MUC2Q02817 5179 aa2.12□□□□□ -2.07
SYNPO2-205ENST00000504178 KRTAP9-7A8MTY7 169 aa2.1□□□□□ -2.07
SYNPO2-205ENST00000504178 KRTAP20-1Q3LI63 56 aa2.1□□□□□ -2.07
SYNPO2-205ENST00000504178 MT1AP04731 61 aa2.09□□□□□ -2.08
SYNPO2-205ENST00000504178 HMCN2Q8NDA2 5059 aa2.08□□□□□ -2.08
SYNPO2-205ENST00000504178 LCE4AQ5TA78 99 aa2.07□□□□□ -2.08
SYNPO2-205ENST00000504178 RNF213Q63HN8 5207 aa2.07□□□□□ -2.08
SYNPO2-205ENST00000504178 UBR4Q5T4S7 5183 aa2.07□□□□□ -2.08
SYNPO2-205ENST00000504178 LCE5AQ5TCM9 118 aa2.06□□□□□ -2.08
SYNPO2-205ENST00000504178 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
SYNPO2-205ENST00000504178 LCE1EQ5T753 118 aa2.06□□□□□ -2.08
SYNPO2-205ENST00000504178 LCE1FQ5T754 118 aa2.06□□□□□ -2.08
SYNPO2-205ENST00000504178 LCE1AQ5T7P2 110 aa2.06□□□□□ -2.08
SYNPO2-205ENST00000504178 LCE2AQ5TA79 106 aaPredicted RBP2.05□□□□□ -2.08
SYNPO2-205ENST00000504178 KRTAP19-7Q3SYF9 63 aa2.05□□□□□ -2.08
SYNPO2-205ENST00000504178 KRTAP4-9Q9BYQ8 210 aa2.05□□□□□ -2.08
SYNPO2-205ENST00000504178 KRTAP2-3P0C7H8 128 aa2.03□□□□□ -2.08
SYNPO2-205ENST00000504178 KRTAP2-4Q9BYR9 128 aa2.03□□□□□ -2.08
SYNPO2-205ENST00000504178 KRTAP2-1Q9BYU5 128 aa2.03□□□□□ -2.08
SYNPO2-205ENST00000504178 FAT4Q6V0I7 4981 aa2□□□□□ -2.09
SYNPO2-205ENST00000504178 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.99□□□□□ -2.09
SYNPO2-205ENST00000504178 KRTAP6-3Q3LI67 103 aa1.99□□□□□ -2.09
SYNPO2-205ENST00000504178 KRTAP9-4Q9BYQ2 154 aa1.96□□□□□ -2.1
SYNPO2-205ENST00000504178 KRTAP6-1Q3LI64 71 aa1.96□□□□□ -2.1
SYNPO2-205ENST00000504178 KRTAP6-2Q3LI66 62 aa1.96□□□□□ -2.1
SYNPO2-205ENST00000504178 KMT2DO14686 5537 aa1.89□□□□□ -2.11
SYNPO2-205ENST00000504178 KRTAP2-2Q9BYT5 123 aa1.89□□□□□ -2.11
SYNPO2-205ENST00000504178 USH2AO75445 5202 aa1.87□□□□□ -2.11
SYNPO2-205ENST00000504178 KRTAP9-6A8MVA2 160 aa1.85□□□□□ -2.11
SYNPO2-205ENST00000504178 MACF1Q9UPN3 7388 aaKnown RBP1.78□□□□□ -2.12
SYNPO2-205ENST00000504178 NEBP20929 6669 aa1.78□□□□□ -2.12
SYNPO2-205ENST00000504178 KRTAP4-6Q9BYQ5 205 aa1.75□□□□□ -2.13
SYNPO2-205ENST00000504178 KRTAP9-9Q9BYP9 154 aa1.74□□□□□ -2.13
SYNPO2-205ENST00000504178 DSTQ03001 7570 aaKnown RBP1.71□□□□□ -2.14
SYNPO2-205ENST00000504178 SYNE1Q8NF91 8797 aaKnown RBP1.7□□□□□ -2.14
SYNPO2-205ENST00000504178 SSPOA2VEC9 5147 aa1.69□□□□□ -2.14
SYNPO2-205ENST00000504178 KRTAP5-9P26371 169 aa1.68□□□□□ -2.14
SYNPO2-205ENST00000504178 MUC12Q9UKN1 5478 aa1.65□□□□□ -2.15
SYNPO2-205ENST00000504178 KRTAP20-2Q3LI61 65 aa1.63□□□□□ -2.15
SYNPO2-205ENST00000504178 GPR98Q8WXG9 6306 aa1.63□□□□□ -2.15
SYNPO2-205ENST00000504178 KRTAP4-11Q9BYQ6 195 aa1.6□□□□□ -2.15
SYNPO2-205ENST00000504178 FCGBPQ9Y6R7 5405 aaPredicted RBP1.57□□□□□ -2.16
SYNPO2-205ENST00000504178 OBSCNQ5VST9 7968 aa1.57□□□□□ -2.16
SYNPO2-205ENST00000504178 MDN1Q9NU22 5596 aa1.53□□□□□ -2.16
SYNPO2-205ENST00000504178 KRTAP4-12Q9BQ66 201 aa1.53□□□□□ -2.16
SYNPO2-205ENST00000504178 KRTAP4-2Q9BYR5 136 aa1.53□□□□□ -2.16
SYNPO2-205ENST00000504178 AHNAK2Q8IVF2 5795 aa1.51□□□□□ -2.17
SYNPO2-205ENST00000504178 KRTAP5-4Q6L8H1 288 aa1.51□□□□□ -2.17
SYNPO2-205ENST00000504178 KRTAP4-4Q9BYR3 166 aa1.51□□□□□ -2.17
SYNPO2-205ENST00000504178 HMCN1Q96RW7 5635 aa1.46□□□□□ -2.18
SYNPO2-205ENST00000504178 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
SYNPO2-205ENST00000504178 KRTAP5-5Q701N2 237 aaPredicted RBP1.4□□□□□ -2.19
SYNPO2-205ENST00000504178 KRTAP5-2Q701N4 177 aa1.34□□□□□ -2.2
SYNPO2-205ENST00000504178 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
SYNPO2-205ENST00000504178 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.3□□□□□ -2.2
SYNPO2-205ENST00000504178 KRTAP5-3Q6L8H2 238 aa1.29□□□□□ -2.2
SYNPO2-205ENST00000504178 MUC19Q7Z5P9 8384 aa1.23□□□□□ -2.21
SYNPO2-205ENST00000504178 KRTAP5-8O75690 187 aa1.2□□□□□ -2.22
SYNPO2-205ENST00000504178 MUC5ACP98088 5654 aa1.18□□□□□ -2.22
SYNPO2-205ENST00000504178 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
SYNPO2-205ENST00000504178 KRTAP5-10Q6L8G5 202 aa1.1□□□□□ -2.23
SYNPO2-205ENST00000504178 KRTAP5-7Q6L8G8 165 aa1.08□□□□□ -2.24
SYNPO2-205ENST00000504178 KRTAP5-1Q6L8H4 278 aa1.03□□□□□ -2.24
SYNPO2-205ENST00000504178 KRTAP5-11Q6L8G4 156 aa1.02□□□□□ -2.25
SYNPO2-205ENST00000504178 KRTAP21-2Q3LI59 83 aa0.94□□□□□ -2.26
SYNPO2-205ENST00000504178 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
SYNPO2-205ENST00000504178 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 61.5 ms