RNA–Protein interactions for RNA: ENST00000496281.1

RTEL1-TNFRSF6B-204, Transcript of RTEL1-TNFRSF6B readthrough (NMD candidate), humanhuman

TSL 2

Gene RTEL1-TNFRSF6B, Length 5,314 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTEL1-TNFRSF6B-204ENST00000496281 MT1MQ8N339 61 aa5.63□□□□□ -1.51
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP2-3P0C7H8 128 aa5.61□□□□□ -1.51
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP2-4Q9BYR9 128 aa5.61□□□□□ -1.51
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP2-1Q9BYU5 128 aa5.61□□□□□ -1.51
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP19-6Q3LI70 58 aa5.56□□□□□ -1.52
RTEL1-TNFRSF6B-204ENST00000496281 FAT4Q6V0I7 4981 aa5.55□□□□□ -1.52
RTEL1-TNFRSF6B-204ENST00000496281 RNF213Q63HN8 5207 aa5.55□□□□□ -1.52
RTEL1-TNFRSF6B-204ENST00000496281 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP4-3Q9BYR4 195 aa5.52□□□□□ -1.53
RTEL1-TNFRSF6B-204ENST00000496281 LCE2DQ5TA82 110 aaPredicted RBP5.49□□□□□ -1.53
RTEL1-TNFRSF6B-204ENST00000496281 HMCN2Q8NDA2 5059 aa5.48□□□□□ -1.53
RTEL1-TNFRSF6B-204ENST00000496281 PRM1P04553 51 aa5.47□□□□□ -1.53
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP19-7Q3SYF9 63 aa5.46□□□□□ -1.53
RTEL1-TNFRSF6B-204ENST00000496281 MT3P25713 68 aa5.46□□□□□ -1.54
RTEL1-TNFRSF6B-204ENST00000496281 MUC2Q02817 5179 aa5.44□□□□□ -1.54
RTEL1-TNFRSF6B-204ENST00000496281 LCE2AQ5TA79 106 aaPredicted RBP5.39□□□□□ -1.55
RTEL1-TNFRSF6B-204ENST00000496281 MT4P47944 62 aa5.34□□□□□ -1.56
RTEL1-TNFRSF6B-204ENST00000496281 OBSCNQ5VST9 7968 aa5.34□□□□□ -1.56
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP9-2Q9BYQ4 174 aa5.32□□□□□ -1.56
RTEL1-TNFRSF6B-204ENST00000496281 MT1AP04731 61 aa5.24□□□□□ -1.57
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP9-6A8MVA2 160 aa5.22□□□□□ -1.57
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP4-9Q9BYQ8 210 aa5.18□□□□□ -1.58
RTEL1-TNFRSF6B-204ENST00000496281 LCE1BQ5T7P3 118 aa5.17□□□□□ -1.58
RTEL1-TNFRSF6B-204ENST00000496281 LCE1DQ5T752 114 aa5.16□□□□□ -1.58
RTEL1-TNFRSF6B-204ENST00000496281 SYNE2Q8WXH0 6885 aaKnown RBP5.11□□□□□ -1.59
RTEL1-TNFRSF6B-204ENST00000496281 FCGBPQ9Y6R7 5405 aaPredicted RBP5.03□□□□□ -1.6
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP6-1Q3LI64 71 aa4.94□□□□□ -1.62
RTEL1-TNFRSF6B-204ENST00000496281 USH2AO75445 5202 aa4.93□□□□□ -1.62
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP9-6A0A140TA67 174 aa4.92□□□□□ -1.62
RTEL1-TNFRSF6B-204ENST00000496281 LCE1AQ5T7P2 110 aa4.91□□□□□ -1.62
RTEL1-TNFRSF6B-204ENST00000496281 LCE5AQ5TCM9 118 aa4.9□□□□□ -1.63
RTEL1-TNFRSF6B-204ENST00000496281 DSTQ03001 7570 aaKnown RBP4.88□□□□□ -1.63
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP6-2Q3LI66 62 aa4.87□□□□□ -1.63
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP6-3Q3LI67 103 aa4.76□□□□□ -1.65
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP9-7A8MTY7 169 aa4.73□□□□□ -1.65
RTEL1-TNFRSF6B-204ENST00000496281 MACF1Q9UPN3 7388 aaKnown RBP4.69□□□□□ -1.66
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP20-1Q3LI63 56 aa4.69□□□□□ -1.66
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.62□□□□□ -1.67
RTEL1-TNFRSF6B-204ENST00000496281 KMT2DO14686 5537 aa4.59□□□□□ -1.67
RTEL1-TNFRSF6B-204ENST00000496281 LCE4AQ5TA78 99 aa4.59□□□□□ -1.68
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP2-2Q9BYT5 123 aa4.49□□□□□ -1.69
RTEL1-TNFRSF6B-204ENST00000496281 MUC19Q7Z5P9 8384 aa4.38□□□□□ -1.71
RTEL1-TNFRSF6B-204ENST00000496281 MUC12Q9UKN1 5478 aa4.37□□□□□ -1.71
RTEL1-TNFRSF6B-204ENST00000496281 LCE1CQ5T751 118 aa4.29□□□□□ -1.72
RTEL1-TNFRSF6B-204ENST00000496281 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
RTEL1-TNFRSF6B-204ENST00000496281 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
RTEL1-TNFRSF6B-204ENST00000496281 SSPOA2VEC9 5147 aa4.29□□□□□ -1.72
RTEL1-TNFRSF6B-204ENST00000496281 MDN1Q9NU22 5596 aa4.29□□□□□ -1.72
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP5-9P26371 169 aa4.17□□□□□ -1.74
RTEL1-TNFRSF6B-204ENST00000496281 NEBP20929 6669 aa4.14□□□□□ -1.75
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP4-6Q9BYQ5 205 aa4.06□□□□□ -1.76
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP4-11Q9BYQ6 195 aa3.98□□□□□ -1.77
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP20-2Q3LI61 65 aa3.96□□□□□ -1.78
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
RTEL1-TNFRSF6B-204ENST00000496281 GPR98Q8WXG9 6306 aa3.88□□□□□ -1.79
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP4-2Q9BYR5 136 aa3.58□□□□□ -1.84
RTEL1-TNFRSF6B-204ENST00000496281 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
RTEL1-TNFRSF6B-204ENST00000496281 HMCN1Q96RW7 5635 aa3.46□□□□□ -1.86
RTEL1-TNFRSF6B-204ENST00000496281 AHNAK2Q8IVF2 5795 aa3.24□□□□□ -1.89
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP5-3Q6L8H2 238 aa3.18□□□□□ -1.9
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.91
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
RTEL1-TNFRSF6B-204ENST00000496281 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
RTEL1-TNFRSF6B-204ENST00000496281 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
RTEL1-TNFRSF6B-204ENST00000496281 PHGR1C9JFL3 82 aa2.54□□□□□ -2
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
RTEL1-TNFRSF6B-204ENST00000496281 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 6.4 ms