RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 KRTAP17-1Q9BYP8 105 aa2.27□□□□□ -2.05
BRCA1-221ENST00000493795 MUC17Q685J3 4493 aa2.27□□□□□ -2.05
BRCA1-221ENST00000493795 MUC2Q02817 5179 aa2.26□□□□□ -2.05
BRCA1-221ENST00000493795 MT1AP04731 61 aa2.25□□□□□ -2.05
BRCA1-221ENST00000493795 KIAA1109Q2LD37 5005 aa2.24□□□□□ -2.05
BRCA1-221ENST00000493795 KRTAP4-3Q9BYR4 195 aa2.22□□□□□ -2.05
BRCA1-221ENST00000493795 KRTAP2-3P0C7H8 128 aa2.19□□□□□ -2.06
BRCA1-221ENST00000493795 KRTAP2-4Q9BYR9 128 aa2.19□□□□□ -2.06
BRCA1-221ENST00000493795 KRTAP2-1Q9BYU5 128 aa2.19□□□□□ -2.06
BRCA1-221ENST00000493795 LRP2P98164 4655 aa2.19□□□□□ -2.06
BRCA1-221ENST00000493795 HMCN2Q8NDA2 5059 aa2.19□□□□□ -2.06
BRCA1-221ENST00000493795 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
BRCA1-221ENST00000493795 LCE1EQ5T753 118 aa2.18□□□□□ -2.06
BRCA1-221ENST00000493795 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
BRCA1-221ENST00000493795 LCE1AQ5T7P2 110 aa2.18□□□□□ -2.06
BRCA1-221ENST00000493795 KRTAP19-6Q3LI70 58 aa2.18□□□□□ -2.06
BRCA1-221ENST00000493795 KRTAP4-9Q9BYQ8 210 aa2.18□□□□□ -2.06
BRCA1-221ENST00000493795 KRTAP6-2Q3LI66 62 aa2.15□□□□□ -2.07
BRCA1-221ENST00000493795 KRTAP20-1Q3LI63 56 aa2.13□□□□□ -2.07
BRCA1-221ENST00000493795 UBR4Q5T4S7 5183 aa2.1□□□□□ -2.07
BRCA1-221ENST00000493795 KRTAP9-2Q9BYQ4 174 aa2.09□□□□□ -2.08
BRCA1-221ENST00000493795 SYNE1Q8NF91 8797 aaKnown RBP2.08□□□□□ -2.08
BRCA1-221ENST00000493795 RNF213Q63HN8 5207 aa2.08□□□□□ -2.08
BRCA1-221ENST00000493795 FAT4Q6V0I7 4981 aa2.08□□□□□ -2.08
BRCA1-221ENST00000493795 KRTAP9-4Q9BYQ2 154 aa2.07□□□□□ -2.08
BRCA1-221ENST00000493795 KRTAP19-7Q3SYF9 63 aa2.06□□□□□ -2.08
BRCA1-221ENST00000493795 LCE4AQ5TA78 99 aa2.03□□□□□ -2.08
BRCA1-221ENST00000493795 KRTAP6-1Q3LI64 71 aa2.03□□□□□ -2.08
BRCA1-221ENST00000493795 KRTAP19-2Q3LHN2 52 aa2.02□□□□□ -2.09
BRCA1-221ENST00000493795 KRTAP9-6A0A140TA67 174 aa2.01□□□□□ -2.09
BRCA1-221ENST00000493795 KRTAP9-7A8MTY7 169 aa2□□□□□ -2.09
BRCA1-221ENST00000493795 KRTAP2-2Q9BYT5 123 aa2□□□□□ -2.09
BRCA1-221ENST00000493795 KRTAP6-3Q3LI67 103 aa1.94□□□□□ -2.1
BRCA1-221ENST00000493795 KRTAP9-9Q9BYP9 154 aa1.89□□□□□ -2.11
BRCA1-221ENST00000493795 SYNE2Q8WXH0 6885 aaKnown RBP1.87□□□□□ -2.11
BRCA1-221ENST00000493795 KRTAP9-6A8MVA2 160 aa1.87□□□□□ -2.11
BRCA1-221ENST00000493795 LCE2AQ5TA79 106 aaPredicted RBP1.84□□□□□ -2.11
BRCA1-221ENST00000493795 KRTAP4-11Q9BYQ6 195 aa1.82□□□□□ -2.12
BRCA1-221ENST00000493795 OBSCNQ5VST9 7968 aa1.82□□□□□ -2.12
BRCA1-221ENST00000493795 USH2AO75445 5202 aa1.8□□□□□ -2.12
BRCA1-221ENST00000493795 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.78□□□□□ -2.12
BRCA1-221ENST00000493795 KRTAP20-2Q3LI61 65 aa1.77□□□□□ -2.13
BRCA1-221ENST00000493795 FSIP2Q5CZC0 6907 aa1.76□□□□□ -2.13
BRCA1-221ENST00000493795 SSPOA2VEC9 5147 aa1.76□□□□□ -2.13
BRCA1-221ENST00000493795 KRTAP4-6Q9BYQ5 205 aa1.72□□□□□ -2.13
BRCA1-221ENST00000493795 KMT2DO14686 5537 aa1.65□□□□□ -2.14
BRCA1-221ENST00000493795 KRTAP4-4Q9BYR3 166 aa1.63□□□□□ -2.15
BRCA1-221ENST00000493795 FCGBPQ9Y6R7 5405 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-221ENST00000493795 KRTAP4-12Q9BQ66 201 aa1.58□□□□□ -2.16
BRCA1-221ENST00000493795 KRTAP4-2Q9BYR5 136 aa1.58□□□□□ -2.16
BRCA1-221ENST00000493795 MUC12Q9UKN1 5478 aa1.55□□□□□ -2.16
BRCA1-221ENST00000493795 NEBP20929 6669 aa1.53□□□□□ -2.16
BRCA1-221ENST00000493795 DSTQ03001 7570 aaKnown RBP1.53□□□□□ -2.17
BRCA1-221ENST00000493795 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
BRCA1-221ENST00000493795 GPR98Q8WXG9 6306 aa1.51□□□□□ -2.17
BRCA1-221ENST00000493795 MDN1Q9NU22 5596 aa1.49□□□□□ -2.17
BRCA1-221ENST00000493795 MACF1Q9UPN3 7388 aaKnown RBP1.47□□□□□ -2.17
BRCA1-221ENST00000493795 KRTAP5-9P26371 169 aa1.46□□□□□ -2.18
BRCA1-221ENST00000493795 KRTAP5-4Q6L8H1 288 aa1.45□□□□□ -2.18
BRCA1-221ENST00000493795 KRTAP5-5Q701N2 237 aaPredicted RBP1.43□□□□□ -2.18
BRCA1-221ENST00000493795 KRTAP5-3Q6L8H2 238 aa1.32□□□□□ -2.2
BRCA1-221ENST00000493795 PHGR1C9JFL3 82 aa1.21□□□□□ -2.22
BRCA1-221ENST00000493795 MUC5ACP98088 5654 aa1.19□□□□□ -2.22
BRCA1-221ENST00000493795 AHNAKQ09666 5890 aaKnown RBP1.18□□□□□ -2.22
BRCA1-221ENST00000493795 KRTAP5-2Q701N4 177 aa1.18□□□□□ -2.22
BRCA1-221ENST00000493795 HMCN1Q96RW7 5635 aa1.14□□□□□ -2.23
BRCA1-221ENST00000493795 KRTAP5-10Q6L8G5 202 aa1.14□□□□□ -2.23
BRCA1-221ENST00000493795 AHNAK2Q8IVF2 5795 aa1.13□□□□□ -2.23
BRCA1-221ENST00000493795 KRTAP5-8O75690 187 aa1.1□□□□□ -2.23
BRCA1-221ENST00000493795 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.1□□□□□ -2.23
BRCA1-221ENST00000493795 MUC5BQ9HC84 5762 aaPredicted RBP1.09□□□□□ -2.24
BRCA1-221ENST00000493795 KRTAP5-1Q6L8H4 278 aa1□□□□□ -2.25
BRCA1-221ENST00000493795 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
BRCA1-221ENST00000493795 KRTAP5-11Q6L8G4 156 aa0.99□□□□□ -2.25
BRCA1-221ENST00000493795 KRTAP5-7Q6L8G8 165 aa0.94□□□□□ -2.26
BRCA1-221ENST00000493795 KRTAP21-2Q3LI59 83 aa0.89□□□□□ -2.27
BRCA1-221ENST00000493795 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 9.7 ms