RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 MT1MQ8N339 61 aa5.12□□□□□ -1.59
BRAT1-206ENST00000493232 KRTAP19-6Q3LI70 58 aa5.11□□□□□ -1.59
BRAT1-206ENST00000493232 LCE2AQ5TA79 106 aaPredicted RBP5.09□□□□□ -1.59
BRAT1-206ENST00000493232 KRTAP9-6A0A140TA67 174 aa5.04□□□□□ -1.6
BRAT1-206ENST00000493232 UBR4Q5T4S7 5183 aa5.01□□□□□ -1.61
BRAT1-206ENST00000493232 RNF213Q63HN8 5207 aa4.99□□□□□ -1.61
BRAT1-206ENST00000493232 MT4P47944 62 aa4.98□□□□□ -1.61
BRAT1-206ENST00000493232 FAT4Q6V0I7 4981 aa4.97□□□□□ -1.61
BRAT1-206ENST00000493232 PRM1P04553 51 aa4.87□□□□□ -1.63
BRAT1-206ENST00000493232 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
BRAT1-206ENST00000493232 KRTAP4-3Q9BYR4 195 aa4.83□□□□□ -1.64
BRAT1-206ENST00000493232 LCE1BQ5T7P3 118 aa4.82□□□□□ -1.64
BRAT1-206ENST00000493232 MT1AP04731 61 aa4.81□□□□□ -1.64
BRAT1-206ENST00000493232 HMCN2Q8NDA2 5059 aa4.81□□□□□ -1.64
BRAT1-206ENST00000493232 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
BRAT1-206ENST00000493232 FSIP2Q5CZC0 6907 aa4.8□□□□□ -1.64
BRAT1-206ENST00000493232 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
BRAT1-206ENST00000493232 SYNE1Q8NF91 8797 aaKnown RBP4.72□□□□□ -1.65
BRAT1-206ENST00000493232 KRTAP9-7A8MTY7 169 aa4.66□□□□□ -1.66
BRAT1-206ENST00000493232 KRTAP20-1Q3LI63 56 aa4.65□□□□□ -1.67
BRAT1-206ENST00000493232 KRTAP2-3P0C7H8 128 aa4.64□□□□□ -1.67
BRAT1-206ENST00000493232 KRTAP2-4Q9BYR9 128 aa4.64□□□□□ -1.67
BRAT1-206ENST00000493232 KRTAP2-1Q9BYU5 128 aa4.64□□□□□ -1.67
BRAT1-206ENST00000493232 LCE1AQ5T7P2 110 aa4.61□□□□□ -1.67
BRAT1-206ENST00000493232 MUC2Q02817 5179 aa4.59□□□□□ -1.68
BRAT1-206ENST00000493232 KRTAP6-3Q3LI67 103 aa4.58□□□□□ -1.68
BRAT1-206ENST00000493232 LCE5AQ5TCM9 118 aa4.54□□□□□ -1.68
BRAT1-206ENST00000493232 KRTAP4-9Q9BYQ8 210 aa4.51□□□□□ -1.69
BRAT1-206ENST00000493232 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.49□□□□□ -1.69
BRAT1-206ENST00000493232 SYNE2Q8WXH0 6885 aaKnown RBP4.43□□□□□ -1.7
BRAT1-206ENST00000493232 LCE4AQ5TA78 99 aa4.42□□□□□ -1.7
BRAT1-206ENST00000493232 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.7
BRAT1-206ENST00000493232 KRTAP6-1Q3LI64 71 aa4.4□□□□□ -1.7
BRAT1-206ENST00000493232 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
BRAT1-206ENST00000493232 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
BRAT1-206ENST00000493232 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
BRAT1-206ENST00000493232 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
BRAT1-206ENST00000493232 USH2AO75445 5202 aa4.19□□□□□ -1.74
BRAT1-206ENST00000493232 LCE1CQ5T751 118 aa4.13□□□□□ -1.75
BRAT1-206ENST00000493232 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
BRAT1-206ENST00000493232 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
BRAT1-206ENST00000493232 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
BRAT1-206ENST00000493232 KMT2DO14686 5537 aa3.98□□□□□ -1.77
BRAT1-206ENST00000493232 FCGBPQ9Y6R7 5405 aaPredicted RBP3.97□□□□□ -1.77
BRAT1-206ENST00000493232 MACF1Q9UPN3 7388 aaKnown RBP3.9□□□□□ -1.79
BRAT1-206ENST00000493232 SSPOA2VEC9 5147 aa3.89□□□□□ -1.79
BRAT1-206ENST00000493232 KRTAP9-9Q9BYP9 154 aa3.86□□□□□ -1.79
BRAT1-206ENST00000493232 NEBP20929 6669 aa3.85□□□□□ -1.79
BRAT1-206ENST00000493232 DSTQ03001 7570 aaKnown RBP3.83□□□□□ -1.8
BRAT1-206ENST00000493232 MUC12Q9UKN1 5478 aa3.7□□□□□ -1.82
BRAT1-206ENST00000493232 MDN1Q9NU22 5596 aa3.62□□□□□ -1.83
BRAT1-206ENST00000493232 KRTAP20-2Q3LI61 65 aa3.62□□□□□ -1.83
BRAT1-206ENST00000493232 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
BRAT1-206ENST00000493232 KRTAP4-11Q9BYQ6 195 aa3.55□□□□□ -1.84
BRAT1-206ENST00000493232 GPR98Q8WXG9 6306 aa3.5□□□□□ -1.85
BRAT1-206ENST00000493232 MUC19Q7Z5P9 8384 aa3.45□□□□□ -1.86
BRAT1-206ENST00000493232 KRTAP5-4Q6L8H1 288 aa3.4□□□□□ -1.86
BRAT1-206ENST00000493232 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
BRAT1-206ENST00000493232 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
BRAT1-206ENST00000493232 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
BRAT1-206ENST00000493232 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
BRAT1-206ENST00000493232 KRTAP5-3Q6L8H2 238 aa3.04□□□□□ -1.92
BRAT1-206ENST00000493232 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
BRAT1-206ENST00000493232 AHNAK2Q8IVF2 5795 aa2.9□□□□□ -1.95
BRAT1-206ENST00000493232 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.95
BRAT1-206ENST00000493232 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
BRAT1-206ENST00000493232 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
BRAT1-206ENST00000493232 KRTAP5-10Q6L8G5 202 aa2.6□□□□□ -1.99
BRAT1-206ENST00000493232 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
BRAT1-206ENST00000493232 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
BRAT1-206ENST00000493232 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
BRAT1-206ENST00000493232 KRTAP5-11Q6L8G4 156 aa2.39□□□□□ -2.03
BRAT1-206ENST00000493232 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
BRAT1-206ENST00000493232 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
BRAT1-206ENST00000493232 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
BRAT1-206ENST00000493232 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
BRAT1-206ENST00000493232 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
BRAT1-206ENST00000493232 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 11.9 ms