RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
VEGFA-212ENST00000480614 HMCN2Q8NDA2 5059 aa2.84□□□□□ -1.95
VEGFA-212ENST00000480614 KRTAP2-3P0C7H8 128 aa2.84□□□□□ -1.96
VEGFA-212ENST00000480614 KRTAP2-4Q9BYR9 128 aa2.84□□□□□ -1.96
VEGFA-212ENST00000480614 KRTAP2-1Q9BYU5 128 aa2.84□□□□□ -1.96
VEGFA-212ENST00000480614 KRTAP17-1Q9BYP8 105 aa2.81□□□□□ -1.96
VEGFA-212ENST00000480614 KRTAP4-7Q9BYR0 210 aa2.81□□□□□ -1.96
VEGFA-212ENST00000480614 SYNE2Q8WXH0 6885 aaKnown RBP2.8□□□□□ -1.96
VEGFA-212ENST00000480614 MT1AP04731 61 aa2.79□□□□□ -1.96
VEGFA-212ENST00000480614 LPAP08519 4548 aa2.78□□□□□ -1.96
VEGFA-212ENST00000480614 KRTAP19-2Q3LHN2 52 aa2.77□□□□□ -1.97
VEGFA-212ENST00000480614 KRTAP9-2Q9BYQ4 174 aa2.76□□□□□ -1.97
VEGFA-212ENST00000480614 LOC100996750A0A140TA64 210 aa2.73□□□□□ -1.97
VEGFA-212ENST00000480614 RNF213Q63HN8 5207 aa2.72□□□□□ -1.97
VEGFA-212ENST00000480614 KIAA1109Q2LD37 5005 aa2.72□□□□□ -1.97
VEGFA-212ENST00000480614 KRTAP20-1Q3LI63 56 aa2.69□□□□□ -1.98
VEGFA-212ENST00000480614 OBSCNQ5VST9 7968 aa2.68□□□□□ -1.98
VEGFA-212ENST00000480614 LCE1AQ5T7P2 110 aa2.67□□□□□ -1.98
VEGFA-212ENST00000480614 LCE5AQ5TCM9 118 aa2.67□□□□□ -1.98
VEGFA-212ENST00000480614 MACF1Q9UPN3 7388 aaKnown RBP2.66□□□□□ -1.98
VEGFA-212ENST00000480614 KRTAP4-3Q9BYR4 195 aa2.65□□□□□ -1.99
VEGFA-212ENST00000480614 KRTAP19-7Q3SYF9 63 aa2.64□□□□□ -1.99
VEGFA-212ENST00000480614 KRTAP9-6A0A140TA67 174 aa2.63□□□□□ -1.99
VEGFA-212ENST00000480614 LCE4AQ5TA78 99 aa2.6□□□□□ -1.99
VEGFA-212ENST00000480614 ABCA13Q86UQ4 5058 aa2.56□□□□□ -2
VEGFA-212ENST00000480614 KRTAP6-3Q3LI67 103 aa2.54□□□□□ -2
VEGFA-212ENST00000480614 UBR4Q5T4S7 5183 aa2.54□□□□□ -2
VEGFA-212ENST00000480614 KRTAP6-2Q3LI66 62 aa2.54□□□□□ -2
VEGFA-212ENST00000480614 KRTAP4-9Q9BYQ8 210 aa2.53□□□□□ -2
VEGFA-212ENST00000480614 KRTAP9-4Q9BYQ2 154 aa2.53□□□□□ -2.01
VEGFA-212ENST00000480614 LCE2AQ5TA79 106 aaPredicted RBP2.52□□□□□ -2.01
VEGFA-212ENST00000480614 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
VEGFA-212ENST00000480614 LCE1EQ5T753 118 aa2.52□□□□□ -2.01
VEGFA-212ENST00000480614 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
VEGFA-212ENST00000480614 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
VEGFA-212ENST00000480614 KRTAP9-7A8MTY7 169 aa2.48□□□□□ -2.01
VEGFA-212ENST00000480614 FAT4Q6V0I7 4981 aa2.44□□□□□ -2.02
VEGFA-212ENST00000480614 KRTAP9-6A8MVA2 160 aa2.44□□□□□ -2.02
VEGFA-212ENST00000480614 KRTAP2-2Q9BYT5 123 aa2.43□□□□□ -2.02
VEGFA-212ENST00000480614 NEBP20929 6669 aa2.42□□□□□ -2.02
VEGFA-212ENST00000480614 SYNE1Q8NF91 8797 aaKnown RBP2.41□□□□□ -2.02
VEGFA-212ENST00000480614 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.38□□□□□ -2.03
VEGFA-212ENST00000480614 MUC2Q02817 5179 aa2.37□□□□□ -2.03
VEGFA-212ENST00000480614 KRTAP9-9Q9BYP9 154 aa2.37□□□□□ -2.03
VEGFA-212ENST00000480614 MUC12Q9UKN1 5478 aa2.35□□□□□ -2.03
VEGFA-212ENST00000480614 GPR98Q8WXG9 6306 aa2.29□□□□□ -2.04
VEGFA-212ENST00000480614 MDN1Q9NU22 5596 aa2.29□□□□□ -2.04
VEGFA-212ENST00000480614 USH2AO75445 5202 aa2.2□□□□□ -2.06
VEGFA-212ENST00000480614 FCGBPQ9Y6R7 5405 aaPredicted RBP2.11□□□□□ -2.07
VEGFA-212ENST00000480614 KMT2DO14686 5537 aa2.1□□□□□ -2.07
VEGFA-212ENST00000480614 KRTAP5-9P26371 169 aa2.08□□□□□ -2.08
VEGFA-212ENST00000480614 KRTAP4-11Q9BYQ6 195 aa2.06□□□□□ -2.08
VEGFA-212ENST00000480614 KRTAP20-2Q3LI61 65 aa2.03□□□□□ -2.09
VEGFA-212ENST00000480614 KRTAP5-4Q6L8H1 288 aa1.97□□□□□ -2.09
VEGFA-212ENST00000480614 KRTAP4-6Q9BYQ5 205 aa1.96□□□□□ -2.1
VEGFA-212ENST00000480614 SSPOA2VEC9 5147 aa1.96□□□□□ -2.1
VEGFA-212ENST00000480614 KRTAP5-5Q701N2 237 aaPredicted RBP1.93□□□□□ -2.1
VEGFA-212ENST00000480614 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
VEGFA-212ENST00000480614 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
VEGFA-212ENST00000480614 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
VEGFA-212ENST00000480614 KRTAP4-12Q9BQ66 201 aa1.81□□□□□ -2.12
VEGFA-212ENST00000480614 KRTAP4-2Q9BYR5 136 aa1.81□□□□□ -2.12
VEGFA-212ENST00000480614 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
VEGFA-212ENST00000480614 MUC5BQ9HC84 5762 aaPredicted RBP1.73□□□□□ -2.13
VEGFA-212ENST00000480614 KRTAP5-3Q6L8H2 238 aa1.69□□□□□ -2.14
VEGFA-212ENST00000480614 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
VEGFA-212ENST00000480614 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
VEGFA-212ENST00000480614 KRTAP5-10Q6L8G5 202 aa1.51□□□□□ -2.17
VEGFA-212ENST00000480614 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
VEGFA-212ENST00000480614 KRTAP5-8O75690 187 aa1.43□□□□□ -2.18
VEGFA-212ENST00000480614 KRTAP5-2Q701N4 177 aa1.4□□□□□ -2.18
VEGFA-212ENST00000480614 KRTAP5-11Q6L8G4 156 aa1.37□□□□□ -2.19
VEGFA-212ENST00000480614 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
VEGFA-212ENST00000480614 KRTAP5-1Q6L8H4 278 aa1.28□□□□□ -2.21
VEGFA-212ENST00000480614 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.22□□□□□ -2.21
VEGFA-212ENST00000480614 KRTAP21-2Q3LI59 83 aa1.22□□□□□ -2.21
VEGFA-212ENST00000480614 KRTAP5-7Q6L8G8 165 aa1.21□□□□□ -2.21
VEGFA-212ENST00000480614 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 99.2 ms