RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 LOC100996750A0A140TA64 210 aa3.94□□□□□ -1.78
PCCB-210ENST00000471595 HMCN2Q8NDA2 5059 aa3.92□□□□□ -1.78
PCCB-210ENST00000471595 FAT4Q6V0I7 4981 aa3.92□□□□□ -1.78
PCCB-210ENST00000471595 MT3P25713 68 aa3.91□□□□□ -1.78
PCCB-210ENST00000471595 KRTAP2-3P0C7H8 128 aa3.91□□□□□ -1.78
PCCB-210ENST00000471595 KRTAP2-4Q9BYR9 128 aa3.91□□□□□ -1.78
PCCB-210ENST00000471595 KRTAP2-1Q9BYU5 128 aa3.91□□□□□ -1.78
PCCB-210ENST00000471595 KRTAP4-3Q9BYR4 195 aa3.9□□□□□ -1.78
PCCB-210ENST00000471595 RNF213Q63HN8 5207 aa3.87□□□□□ -1.79
PCCB-210ENST00000471595 LCE2DQ5TA82 110 aaPredicted RBP3.85□□□□□ -1.79
PCCB-210ENST00000471595 KRTAP9-2Q9BYQ4 174 aa3.84□□□□□ -1.79
PCCB-210ENST00000471595 PRM1P04553 51 aa3.83□□□□□ -1.8
PCCB-210ENST00000471595 MT1AP04731 61 aa3.81□□□□□ -1.8
PCCB-210ENST00000471595 UBR4Q5T4S7 5183 aa3.76□□□□□ -1.81
PCCB-210ENST00000471595 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
PCCB-210ENST00000471595 KRTAP9-6A0A140TA67 174 aa3.7□□□□□ -1.82
PCCB-210ENST00000471595 MT4P47944 62 aa3.69□□□□□ -1.82
PCCB-210ENST00000471595 FSIP2Q5CZC0 6907 aa3.68□□□□□ -1.82
PCCB-210ENST00000471595 KRTAP4-9Q9BYQ8 210 aa3.64□□□□□ -1.83
PCCB-210ENST00000471595 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
PCCB-210ENST00000471595 LCE5AQ5TCM9 118 aa3.6□□□□□ -1.83
PCCB-210ENST00000471595 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
PCCB-210ENST00000471595 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
PCCB-210ENST00000471595 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
PCCB-210ENST00000471595 SYNE1Q8NF91 8797 aaKnown RBP3.53□□□□□ -1.84
PCCB-210ENST00000471595 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
PCCB-210ENST00000471595 MUC2Q02817 5179 aa3.49□□□□□ -1.85
PCCB-210ENST00000471595 KRTAP6-3Q3LI67 103 aa3.46□□□□□ -1.86
PCCB-210ENST00000471595 KRTAP6-2Q3LI66 62 aa3.45□□□□□ -1.86
PCCB-210ENST00000471595 KRTAP9-7A8MTY7 169 aa3.44□□□□□ -1.86
PCCB-210ENST00000471595 LCE4AQ5TA78 99 aa3.36□□□□□ -1.87
PCCB-210ENST00000471595 SYNE2Q8WXH0 6885 aaKnown RBP3.34□□□□□ -1.88
PCCB-210ENST00000471595 KRTAP20-1Q3LI63 56 aa3.33□□□□□ -1.88
PCCB-210ENST00000471595 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
PCCB-210ENST00000471595 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.28□□□□□ -1.88
PCCB-210ENST00000471595 USH2AO75445 5202 aa3.25□□□□□ -1.89
PCCB-210ENST00000471595 KRTAP2-2Q9BYT5 123 aa3.2□□□□□ -1.9
PCCB-210ENST00000471595 FCGBPQ9Y6R7 5405 aaPredicted RBP3.13□□□□□ -1.91
PCCB-210ENST00000471595 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
PCCB-210ENST00000471595 KMT2DO14686 5537 aa3.11□□□□□ -1.91
PCCB-210ENST00000471595 SSPOA2VEC9 5147 aa3.02□□□□□ -1.93
PCCB-210ENST00000471595 DSTQ03001 7570 aaKnown RBP2.95□□□□□ -1.94
PCCB-210ENST00000471595 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
PCCB-210ENST00000471595 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
PCCB-210ENST00000471595 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
PCCB-210ENST00000471595 MACF1Q9UPN3 7388 aaKnown RBP2.91□□□□□ -1.94
PCCB-210ENST00000471595 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
PCCB-210ENST00000471595 MUC12Q9UKN1 5478 aa2.86□□□□□ -1.95
PCCB-210ENST00000471595 KRTAP4-6Q9BYQ5 205 aa2.86□□□□□ -1.95
PCCB-210ENST00000471595 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
PCCB-210ENST00000471595 KRTAP4-11Q9BYQ6 195 aa2.8□□□□□ -1.96
PCCB-210ENST00000471595 NEBP20929 6669 aa2.78□□□□□ -1.96
PCCB-210ENST00000471595 KRTAP9-9Q9BYP9 154 aa2.77□□□□□ -1.97
PCCB-210ENST00000471595 KRTAP5-4Q6L8H1 288 aa2.7□□□□□ -1.98
PCCB-210ENST00000471595 MDN1Q9NU22 5596 aa2.6□□□□□ -1.99
PCCB-210ENST00000471595 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
PCCB-210ENST00000471595 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
PCCB-210ENST00000471595 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
PCCB-210ENST00000471595 KRTAP4-2Q9BYR5 136 aa2.42□□□□□ -2.02
PCCB-210ENST00000471595 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
PCCB-210ENST00000471595 KRTAP5-3Q6L8H2 238 aa2.34□□□□□ -2.03
PCCB-210ENST00000471595 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
PCCB-210ENST00000471595 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
PCCB-210ENST00000471595 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
PCCB-210ENST00000471595 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
PCCB-210ENST00000471595 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
PCCB-210ENST00000471595 AHNAK2Q8IVF2 5795 aa2.01□□□□□ -2.09
PCCB-210ENST00000471595 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
PCCB-210ENST00000471595 KRTAP5-1Q6L8H4 278 aa1.93□□□□□ -2.1
PCCB-210ENST00000471595 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
PCCB-210ENST00000471595 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
PCCB-210ENST00000471595 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
PCCB-210ENST00000471595 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
PCCB-210ENST00000471595 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
PCCB-210ENST00000471595 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
PCCB-210ENST00000471595 KRTAP5-7Q6L8G8 165 aa1.61□□□□□ -2.15
PCCB-210ENST00000471595 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 106.8 ms