RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 LCE2AQ5TA79 106 aaPredicted RBP4.37□□□□□ -1.71
CHRNA4-202ENST00000463705 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
CHRNA4-202ENST00000463705 UBR4Q5T4S7 5183 aa4.31□□□□□ -1.72
CHRNA4-202ENST00000463705 MT1MQ8N339 61 aa4.28□□□□□ -1.72
CHRNA4-202ENST00000463705 FAT4Q6V0I7 4981 aa4.27□□□□□ -1.73
CHRNA4-202ENST00000463705 RNF213Q63HN8 5207 aa4.26□□□□□ -1.73
CHRNA4-202ENST00000463705 SYNE1Q8NF91 8797 aaKnown RBP4.19□□□□□ -1.74
CHRNA4-202ENST00000463705 HMCN2Q8NDA2 5059 aa4.18□□□□□ -1.74
CHRNA4-202ENST00000463705 MT3P25713 68 aa4.16□□□□□ -1.74
CHRNA4-202ENST00000463705 KRTAP19-7Q3SYF9 63 aa4.15□□□□□ -1.75
CHRNA4-202ENST00000463705 FSIP2Q5CZC0 6907 aa4.13□□□□□ -1.75
CHRNA4-202ENST00000463705 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
CHRNA4-202ENST00000463705 LOC100996750A0A140TA64 210 aa4.12□□□□□ -1.75
CHRNA4-202ENST00000463705 KRTAP4-3Q9BYR4 195 aa4.11□□□□□ -1.75
CHRNA4-202ENST00000463705 MT4P47944 62 aa4.06□□□□□ -1.76
CHRNA4-202ENST00000463705 KRTAP20-1Q3LI63 56 aa4.06□□□□□ -1.76
CHRNA4-202ENST00000463705 KRTAP6-3Q3LI67 103 aa4.02□□□□□ -1.77
CHRNA4-202ENST00000463705 MT1AP04731 61 aa4.01□□□□□ -1.77
CHRNA4-202ENST00000463705 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.98□□□□□ -1.77
CHRNA4-202ENST00000463705 SYNE2Q8WXH0 6885 aaKnown RBP3.95□□□□□ -1.78
CHRNA4-202ENST00000463705 KRTAP2-3P0C7H8 128 aa3.92□□□□□ -1.78
CHRNA4-202ENST00000463705 KRTAP2-4Q9BYR9 128 aa3.92□□□□□ -1.78
CHRNA4-202ENST00000463705 KRTAP2-1Q9BYU5 128 aa3.92□□□□□ -1.78
CHRNA4-202ENST00000463705 MUC2Q02817 5179 aa3.91□□□□□ -1.78
CHRNA4-202ENST00000463705 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.78
CHRNA4-202ENST00000463705 PRM1P04553 51 aa3.9□□□□□ -1.78
CHRNA4-202ENST00000463705 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
CHRNA4-202ENST00000463705 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
CHRNA4-202ENST00000463705 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
CHRNA4-202ENST00000463705 KRTAP4-9Q9BYQ8 210 aa3.78□□□□□ -1.8
CHRNA4-202ENST00000463705 LCE5AQ5TCM9 118 aa3.76□□□□□ -1.81
CHRNA4-202ENST00000463705 KRTAP2-2Q9BYT5 123 aa3.76□□□□□ -1.81
CHRNA4-202ENST00000463705 KRTAP6-1Q3LI64 71 aa3.71□□□□□ -1.82
CHRNA4-202ENST00000463705 LCE4AQ5TA78 99 aa3.7□□□□□ -1.82
CHRNA4-202ENST00000463705 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
CHRNA4-202ENST00000463705 KRTAP9-4Q9BYQ2 154 aa3.69□□□□□ -1.82
CHRNA4-202ENST00000463705 KRTAP6-2Q3LI66 62 aa3.61□□□□□ -1.83
CHRNA4-202ENST00000463705 USH2AO75445 5202 aa3.61□□□□□ -1.83
CHRNA4-202ENST00000463705 KMT2DO14686 5537 aa3.5□□□□□ -1.85
CHRNA4-202ENST00000463705 FCGBPQ9Y6R7 5405 aaPredicted RBP3.49□□□□□ -1.85
CHRNA4-202ENST00000463705 NEBP20929 6669 aa3.45□□□□□ -1.86
CHRNA4-202ENST00000463705 KRTAP5-9P26371 169 aa3.41□□□□□ -1.86
CHRNA4-202ENST00000463705 MACF1Q9UPN3 7388 aaKnown RBP3.4□□□□□ -1.87
CHRNA4-202ENST00000463705 DSTQ03001 7570 aaKnown RBP3.38□□□□□ -1.87
CHRNA4-202ENST00000463705 SSPOA2VEC9 5147 aa3.38□□□□□ -1.87
CHRNA4-202ENST00000463705 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
CHRNA4-202ENST00000463705 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
CHRNA4-202ENST00000463705 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
CHRNA4-202ENST00000463705 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
CHRNA4-202ENST00000463705 MUC12Q9UKN1 5478 aa3.2□□□□□ -1.9
CHRNA4-202ENST00000463705 KRTAP9-9Q9BYP9 154 aa3.2□□□□□ -1.9
CHRNA4-202ENST00000463705 MDN1Q9NU22 5596 aa3.14□□□□□ -1.91
CHRNA4-202ENST00000463705 KRTAP4-6Q9BYQ5 205 aa3.09□□□□□ -1.91
CHRNA4-202ENST00000463705 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
CHRNA4-202ENST00000463705 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
CHRNA4-202ENST00000463705 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
CHRNA4-202ENST00000463705 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
CHRNA4-202ENST00000463705 KRTAP4-11Q9BYQ6 195 aa2.86□□□□□ -1.95
CHRNA4-202ENST00000463705 KRTAP5-3Q6L8H2 238 aa2.67□□□□□ -1.98
CHRNA4-202ENST00000463705 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
CHRNA4-202ENST00000463705 AHNAK2Q8IVF2 5795 aa2.64□□□□□ -1.99
CHRNA4-202ENST00000463705 KRTAP4-12Q9BQ66 201 aa2.62□□□□□ -1.99
CHRNA4-202ENST00000463705 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
CHRNA4-202ENST00000463705 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
CHRNA4-202ENST00000463705 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
CHRNA4-202ENST00000463705 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
CHRNA4-202ENST00000463705 KRTAP5-2Q701N4 177 aa2.35□□□□□ -2.03
CHRNA4-202ENST00000463705 KRTAP5-10Q6L8G5 202 aa2.27□□□□□ -2.05
CHRNA4-202ENST00000463705 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
CHRNA4-202ENST00000463705 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
CHRNA4-202ENST00000463705 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
CHRNA4-202ENST00000463705 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.08
CHRNA4-202ENST00000463705 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
CHRNA4-202ENST00000463705 KRTAP5-1Q6L8H4 278 aa2.05□□□□□ -2.08
CHRNA4-202ENST00000463705 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
CHRNA4-202ENST00000463705 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
CHRNA4-202ENST00000463705 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
CHRNA4-202ENST00000463705 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 77.3 ms