RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 DCAF8L2P0C7V8 631 aa23.36■■□□□ 1.33
CHRNA4-202ENST00000463705 NISCHQ9Y2I1 1504 aa23.29■■□□□ 1.32
CHRNA4-202ENST00000463705 SUPT5HO00267 1087 aaKnown RBP22.33■■□□□ 1.16
CHRNA4-202ENST00000463705 SHROOM4Q9ULL8 1493 aa22.06■■□□□ 1.12
CHRNA4-202ENST00000463705 EHMT2Q96KQ7 1210 aa21.33■■□□□ 1.01
CHRNA4-202ENST00000463705 APLP2Q06481 763 aa21.16■□□□□ 0.98
CHRNA4-202ENST00000463705 FAM9AQ8IZU1 332 aaPredicted RBP20.98■□□□□ 0.95
CHRNA4-202ENST00000463705 PELP1Q8IZL8 1130 aaKnown RBP20.84■□□□□ 0.93
CHRNA4-202ENST00000463705 PCGF6Q9BYE7 350 aa20.75■□□□□ 0.91
CHRNA4-202ENST00000463705 TRIM41Q8WV44 630 aa20.74■□□□□ 0.91
CHRNA4-202ENST00000463705 TTBK1Q5TCY1 1321 aaPredicted RBP20.61■□□□□ 0.89
CHRNA4-202ENST00000463705 ZEB1P37275 1124 aaPredicted RBP20.55■□□□□ 0.88
CHRNA4-202ENST00000463705 RANGAP1P46060 587 aaPredicted RBP20.45■□□□□ 0.86
CHRNA4-202ENST00000463705 UBTFP17480 764 aaKnown RBP20.4■□□□□ 0.86
CHRNA4-202ENST00000463705 CCER1Q8TC90 406 aaPredicted RBP20.31■□□□□ 0.84
CHRNA4-202ENST00000463705 ATP1B4Q9UN42 357 aaPredicted RBP20.28■□□□□ 0.84
CHRNA4-202ENST00000463705 CENPBP07199 599 aaPredicted RBP20.21■□□□□ 0.83
CHRNA4-202ENST00000463705 CHIC1Q5VXU3 224 aa20.1■□□□□ 0.81
CHRNA4-202ENST00000463705 TRIM26Q12899 539 aaPredicted RBP20.04■□□□□ 0.8
CHRNA4-202ENST00000463705 PPARGC1BQ86YN6 1023 aaKnown RBP20.01■□□□□ 0.79
CHRNA4-202ENST00000463705 LOC105371045A0A1W2PR82 267 aa19.95■□□□□ 0.78
CHRNA4-202ENST00000463705 ABCC9O60706 1549 aa19.82■□□□□ 0.76
CHRNA4-202ENST00000463705 HRCP23327 699 aa19.79■□□□□ 0.76
CHRNA4-202ENST00000463705 ERICH6Q7L0X2 663 aa19.78■□□□□ 0.76
CHRNA4-202ENST00000463705 NEFLP07196 543 aa19.77■□□□□ 0.76
CHRNA4-202ENST00000463705 YTHDC1Q96MU7 727 aaKnown RBP19.68■□□□□ 0.74
CHRNA4-202ENST00000463705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.66■□□□□ 0.74
CHRNA4-202ENST00000463705 HNRNPUL2Q1KMD3 747 aaKnown RBP19.66■□□□□ 0.74
CHRNA4-202ENST00000463705 ITGAEP38570 1179 aa19.63■□□□□ 0.73
CHRNA4-202ENST00000463705 PABPN1Q86U42 306 aaKnown RBP eCLIP19.61■□□□□ 0.73
CHRNA4-202ENST00000463705 MYT1LQ9UL68 1186 aa19.52■□□□□ 0.72
CHRNA4-202ENST00000463705 ZCCHC6Q5VYS8 1495 aaKnown RBP19.34■□□□□ 0.69
CHRNA4-202ENST00000463705 CCDC180Q9P1Z9 1646 aa19.34■□□□□ 0.69
CHRNA4-202ENST00000463705 POLR3GLQ9BT43 218 aa19.3■□□□□ 0.68
CHRNA4-202ENST00000463705 FAM50AQ14320 339 aaKnown RBP19.26■□□□□ 0.67
CHRNA4-202ENST00000463705 MYT1Q01538 1121 aa19.24■□□□□ 0.67
CHRNA4-202ENST00000463705 DIEXFQ68CQ4 756 aaKnown RBP19.18■□□□□ 0.66
CHRNA4-202ENST00000463705 SCRIBQ14160 1630 aa19.18■□□□□ 0.66
CHRNA4-202ENST00000463705 CSRNP3Q8WYN3 585 aa19.13■□□□□ 0.65
CHRNA4-202ENST00000463705 TRIM52Q96A61 297 aa19.12■□□□□ 0.65
CHRNA4-202ENST00000463705 DAXXQ9UER7 740 aaPredicted RBP19.09■□□□□ 0.65
CHRNA4-202ENST00000463705 CNGB1Q14028 1251 aaPredicted RBP19.04■□□□□ 0.64
CHRNA4-202ENST00000463705 NEUROD1Q13562 356 aa19■□□□□ 0.63
CHRNA4-202ENST00000463705 SLC4A1APQ9BWU0 796 aaKnown RBP18.97■□□□□ 0.63
CHRNA4-202ENST00000463705 FBLN2P98095 1184 aa18.96■□□□□ 0.63
CHRNA4-202ENST00000463705 RB1CC1Q8TDY2 1594 aa18.89■□□□□ 0.61
CHRNA4-202ENST00000463705 P3H3Q8IVL6 736 aa18.88■□□□□ 0.61
CHRNA4-202ENST00000463705 CDK11AQ9UQ88 783 aaPredicted RBP18.86■□□□□ 0.61
CHRNA4-202ENST00000463705 ANP32CO43423 234 aa18.85■□□□□ 0.61
CHRNA4-202ENST00000463705 ZNF316A6NFI3 1004 aaPredicted RBP18.85■□□□□ 0.61
CHRNA4-202ENST00000463705 DCAF1Q9Y4B6 1507 aa18.81■□□□□ 0.6
CHRNA4-202ENST00000463705 ZNF326Q5BKZ1 582 aaKnown RBP18.77■□□□□ 0.59
CHRNA4-202ENST00000463705 NACADO15069 1562 aa18.75■□□□□ 0.59
CHRNA4-202ENST00000463705 ARID3CA6NKF2 412 aa18.72■□□□□ 0.59
CHRNA4-202ENST00000463705 CLSPNQ9HAW4 1339 aa18.71■□□□□ 0.59
CHRNA4-202ENST00000463705 GTF3C3Q9Y5Q9 886 aa18.67■□□□□ 0.58
CHRNA4-202ENST00000463705 RSF1Q96T23 1441 aaPredicted RBP18.65■□□□□ 0.58
CHRNA4-202ENST00000463705 ZNF777Q9ULD5 760 aaPredicted RBP18.64■□□□□ 0.57
CHRNA4-202ENST00000463705 EEA1Q15075 1411 aa18.61■□□□□ 0.57
CHRNA4-202ENST00000463705 RTL5Q5HYW3 569 aaPredicted RBP18.6■□□□□ 0.57
CHRNA4-202ENST00000463705 TONSLQ96HA7 1378 aa18.56■□□□□ 0.56
CHRNA4-202ENST00000463705 BCANQ96GW7 911 aa18.56■□□□□ 0.56
CHRNA4-202ENST00000463705 NEFMP07197 916 aa18.53■□□□□ 0.56
CHRNA4-202ENST00000463705 ACIN1Q9UKV3 1341 aaKnown RBP18.51■□□□□ 0.55
CHRNA4-202ENST00000463705 ZBTB47Q9UFB7 747 aaPredicted RBP18.51■□□□□ 0.55
CHRNA4-202ENST00000463705 CLIP1P30622 1438 aa18.48■□□□□ 0.55
CHRNA4-202ENST00000463705 NPM1P06748 294 aaKnown RBP eCLIP18.48■□□□□ 0.55
CHRNA4-202ENST00000463705 MYO15BQ96JP2 1530 aa18.48■□□□□ 0.55
CHRNA4-202ENST00000463705 GOLGA3Q08378 1498 aa18.48■□□□□ 0.55
CHRNA4-202ENST00000463705 BAZ1BQ9UIG0 1483 aaKnown RBP18.47■□□□□ 0.55
CHRNA4-202ENST00000463705 CANXP27824 592 aaKnown RBP18.45■□□□□ 0.54
CHRNA4-202ENST00000463705 ESF1Q9H501 851 aaKnown RBP18.43■□□□□ 0.54
CHRNA4-202ENST00000463705 MTUS2Q5JR59 1369 aa18.43■□□□□ 0.54
CHRNA4-202ENST00000463705 WRNQ14191 1432 aaPredicted RBP eCLIP18.41■□□□□ 0.54
CHRNA4-202ENST00000463705 BAZ1AQ9NRL2 1556 aaPredicted RBP18.4■□□□□ 0.54
CHRNA4-202ENST00000463705 CHMP7Q8WUX9 453 aaPredicted RBP18.38■□□□□ 0.53
CHRNA4-202ENST00000463705 CEP162Q5TB80 1403 aa18.35■□□□□ 0.53
CHRNA4-202ENST00000463705 CHIC2Q9UKJ5 165 aa18.35■□□□□ 0.53
CHRNA4-202ENST00000463705 TSPY4P0CV99 314 aa18.34■□□□□ 0.53
CHRNA4-202ENST00000463705 TSPY10P0CW01 314 aa18.34■□□□□ 0.53
CHRNA4-202ENST00000463705 KIF27Q86VH2 1401 aa18.33■□□□□ 0.52
CHRNA4-202ENST00000463705 DDX10Q13206 875 aaKnown RBP18.31■□□□□ 0.52
CHRNA4-202ENST00000463705 STAG3Q9UJ98 1225 aa18.31■□□□□ 0.52
CHRNA4-202ENST00000463705 CEP164Q9UPV0 1460 aa18.31■□□□□ 0.52
CHRNA4-202ENST00000463705 CHGAP10645 457 aaKnown RBP18.28■□□□□ 0.52
CHRNA4-202ENST00000463705 TNIKQ9UKE5 1360 aa18.28■□□□□ 0.52
CHRNA4-202ENST00000463705 SLC24A1O60721 1099 aa18.24■□□□□ 0.51
CHRNA4-202ENST00000463705 CECR2Q9BXF3 1484 aa18.24■□□□□ 0.51
CHRNA4-202ENST00000463705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.2■□□□□ 0.5
CHRNA4-202ENST00000463705 HNRNPUQ00839 825 aaKnown RBP eCLIP18.2■□□□□ 0.5
CHRNA4-202ENST00000463705 ANP32AP39687 249 aaKnown RBP18.2■□□□□ 0.5
CHRNA4-202ENST00000463705 FKBP8Q14318 412 aa18.17■□□□□ 0.5
CHRNA4-202ENST00000463705 PLEKHD1A6NEE1 506 aa18.17■□□□□ 0.5
CHRNA4-202ENST00000463705 FAM9BQ8IZU0 186 aa18.16■□□□□ 0.5
CHRNA4-202ENST00000463705 RRP7BPQ9NSQ0 103 aa18.12■□□□□ 0.49
CHRNA4-202ENST00000463705 TMC1Q8TDI8 760 aa18.12■□□□□ 0.49
CHRNA4-202ENST00000463705 MIER1Q8N108 512 aa18.1■□□□□ 0.49
CHRNA4-202ENST00000463705 EIF4G2P78344 907 aaKnown RBP eCLIP18.09■□□□□ 0.49
CHRNA4-202ENST00000463705 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.08■□□□□ 0.49
CHRNA4-202ENST00000463705 KDM2AQ9Y2K7 1162 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms