RNA–Protein interactions for RNA: ENST00000447393.5

PACS2-203, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 1 (best) BASIC

Gene PACS2, Length 6,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-203ENST00000447393 LCE1BQ5T7P3 118 aa5.41□□□□□ -1.54
PACS2-203ENST00000447393 LCE1DQ5T752 114 aa5.37□□□□□ -1.55
PACS2-203ENST00000447393 PRM1P04553 51 aa5.34□□□□□ -1.55
PACS2-203ENST00000447393 SYNE1Q8NF91 8797 aaKnown RBP5.31□□□□□ -1.56
PACS2-203ENST00000447393 FLGP20930 4061 aaPredicted RBP5.3□□□□□ -1.56
PACS2-203ENST00000447393 MUC17Q685J3 4493 aa5.29□□□□□ -1.56
PACS2-203ENST00000447393 ABCA13Q86UQ4 5058 aa5.28□□□□□ -1.56
PACS2-203ENST00000447393 TNXBP22105 4242 aa5.26□□□□□ -1.57
PACS2-203ENST00000447393 FSIP2Q5CZC0 6907 aa5.22□□□□□ -1.57
PACS2-203ENST00000447393 KRTAP9-6A0A140TA67 174 aa5.22□□□□□ -1.57
PACS2-203ENST00000447393 KRTAP19-7Q3SYF9 63 aa5.13□□□□□ -1.59
PACS2-203ENST00000447393 LCE2AQ5TA79 106 aaPredicted RBP5.13□□□□□ -1.59
PACS2-203ENST00000447393 MT1AP04731 61 aa5.11□□□□□ -1.59
PACS2-203ENST00000447393 KRTAP4-9Q9BYQ8 210 aa5.09□□□□□ -1.59
PACS2-203ENST00000447393 LCE5AQ5TCM9 118 aa5.07□□□□□ -1.6
PACS2-203ENST00000447393 UBR4Q5T4S7 5183 aa5.07□□□□□ -1.6
PACS2-203ENST00000447393 KRTAP20-1Q3LI63 56 aa5.06□□□□□ -1.6
PACS2-203ENST00000447393 RNF213Q63HN8 5207 aa5.05□□□□□ -1.6
PACS2-203ENST00000447393 FAT4Q6V0I7 4981 aa5.05□□□□□ -1.6
PACS2-203ENST00000447393 KRTAP2-3P0C7H8 128 aa5.02□□□□□ -1.61
PACS2-203ENST00000447393 KRTAP2-4Q9BYR9 128 aa5.02□□□□□ -1.61
PACS2-203ENST00000447393 KRTAP2-1Q9BYU5 128 aa5.02□□□□□ -1.61
PACS2-203ENST00000447393 MUC2Q02817 5179 aa5□□□□□ -1.61
PACS2-203ENST00000447393 SYNE2Q8WXH0 6885 aaKnown RBP4.98□□□□□ -1.61
PACS2-203ENST00000447393 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
PACS2-203ENST00000447393 HMCN2Q8NDA2 5059 aa4.95□□□□□ -1.62
PACS2-203ENST00000447393 KRTAP6-3Q3LI67 103 aa4.84□□□□□ -1.63
PACS2-203ENST00000447393 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
PACS2-203ENST00000447393 KRTAP6-2Q3LI66 62 aa4.82□□□□□ -1.64
PACS2-203ENST00000447393 OBSCNQ5VST9 7968 aa4.82□□□□□ -1.64
PACS2-203ENST00000447393 KRTAP6-1Q3LI64 71 aa4.82□□□□□ -1.64
PACS2-203ENST00000447393 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.73□□□□□ -1.65
PACS2-203ENST00000447393 KRTAP9-4Q9BYQ2 154 aa4.73□□□□□ -1.65
PACS2-203ENST00000447393 LCE4AQ5TA78 99 aa4.69□□□□□ -1.66
PACS2-203ENST00000447393 LCE1CQ5T751 118 aa4.66□□□□□ -1.66
PACS2-203ENST00000447393 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
PACS2-203ENST00000447393 LCE1FQ5T754 118 aa4.66□□□□□ -1.66
PACS2-203ENST00000447393 KRTAP9-6A8MVA2 160 aa4.66□□□□□ -1.66
PACS2-203ENST00000447393 KRTAP2-2Q9BYT5 123 aa4.65□□□□□ -1.66
PACS2-203ENST00000447393 USH2AO75445 5202 aa4.38□□□□□ -1.71
PACS2-203ENST00000447393 FCGBPQ9Y6R7 5405 aaPredicted RBP4.36□□□□□ -1.71
PACS2-203ENST00000447393 DSTQ03001 7570 aaKnown RBP4.33□□□□□ -1.72
PACS2-203ENST00000447393 MACF1Q9UPN3 7388 aaKnown RBP4.24□□□□□ -1.73
PACS2-203ENST00000447393 KRTAP9-9Q9BYP9 154 aa4.24□□□□□ -1.73
PACS2-203ENST00000447393 NEBP20929 6669 aa4.08□□□□□ -1.76
PACS2-203ENST00000447393 KMT2DO14686 5537 aa4.05□□□□□ -1.76
PACS2-203ENST00000447393 KRTAP4-6Q9BYQ5 205 aa4.03□□□□□ -1.76
PACS2-203ENST00000447393 KRTAP5-9P26371 169 aa3.96□□□□□ -1.77
PACS2-203ENST00000447393 KRTAP4-11Q9BYQ6 195 aa3.96□□□□□ -1.77
PACS2-203ENST00000447393 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
PACS2-203ENST00000447393 SSPOA2VEC9 5147 aa3.9□□□□□ -1.78
PACS2-203ENST00000447393 MUC19Q7Z5P9 8384 aa3.88□□□□□ -1.79
PACS2-203ENST00000447393 MDN1Q9NU22 5596 aa3.82□□□□□ -1.8
PACS2-203ENST00000447393 KRTAP4-4Q9BYR3 166 aa3.77□□□□□ -1.81
PACS2-203ENST00000447393 MUC12Q9UKN1 5478 aa3.75□□□□□ -1.81
PACS2-203ENST00000447393 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
PACS2-203ENST00000447393 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
PACS2-203ENST00000447393 GPR98Q8WXG9 6306 aa3.7□□□□□ -1.82
PACS2-203ENST00000447393 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
PACS2-203ENST00000447393 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
PACS2-203ENST00000447393 MUC5ACP98088 5654 aa3.23□□□□□ -1.89
PACS2-203ENST00000447393 KRTAP5-3Q6L8H2 238 aa3.17□□□□□ -1.9
PACS2-203ENST00000447393 HMCN1Q96RW7 5635 aa3.05□□□□□ -1.92
PACS2-203ENST00000447393 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
PACS2-203ENST00000447393 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
PACS2-203ENST00000447393 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
PACS2-203ENST00000447393 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
PACS2-203ENST00000447393 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
PACS2-203ENST00000447393 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
PACS2-203ENST00000447393 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
PACS2-203ENST00000447393 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
PACS2-203ENST00000447393 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
PACS2-203ENST00000447393 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
PACS2-203ENST00000447393 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
PACS2-203ENST00000447393 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.08
PACS2-203ENST00000447393 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
PACS2-203ENST00000447393 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 238 ms