RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 LOC100996750A0A140TA64 210 aa3.34□□□□□ -1.88
FN1-211ENST00000443816 KRTAP2-3P0C7H8 128 aa3.3□□□□□ -1.88
FN1-211ENST00000443816 KRTAP2-4Q9BYR9 128 aa3.3□□□□□ -1.88
FN1-211ENST00000443816 LCE1AQ5T7P2 110 aa3.3□□□□□ -1.88
FN1-211ENST00000443816 KRTAP6-3Q3LI67 103 aa3.29□□□□□ -1.88
FN1-211ENST00000443816 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
FN1-211ENST00000443816 HERC2O95714 4834 aa3.28□□□□□ -1.88
FN1-211ENST00000443816 PRM1P04553 51 aa3.27□□□□□ -1.89
FN1-211ENST00000443816 MT1AP04731 61 aa3.26□□□□□ -1.89
FN1-211ENST00000443816 KMT2CQ8NEZ4 4911 aaKnown RBP3.24□□□□□ -1.89
FN1-211ENST00000443816 LCE5AQ5TCM9 118 aa3.24□□□□□ -1.89
FN1-211ENST00000443816 LCE4AQ5TA78 99 aa3.23□□□□□ -1.89
FN1-211ENST00000443816 KRTAP19-7Q3SYF9 63 aa3.21□□□□□ -1.89
FN1-211ENST00000443816 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.19□□□□□ -1.9
FN1-211ENST00000443816 KRTAP2-1Q9BYU5 128 aa3.19□□□□□ -1.9
FN1-211ENST00000443816 KRTAP2-2Q9BYT5 123 aa3.16□□□□□ -1.9
FN1-211ENST00000443816 KIAA1109Q2LD37 5005 aa3.16□□□□□ -1.9
FN1-211ENST00000443816 PCLOQ9Y6V0 5065 aa3.15□□□□□ -1.9
FN1-211ENST00000443816 SYNE2Q8WXH0 6885 aaKnown RBP3.12□□□□□ -1.91
FN1-211ENST00000443816 HERC1Q15751 4861 aa3.11□□□□□ -1.91
FN1-211ENST00000443816 BIRC6Q9NR09 4857 aa3.06□□□□□ -1.92
FN1-211ENST00000443816 KRTAP9-4Q9BYQ2 154 aa3.06□□□□□ -1.92
FN1-211ENST00000443816 KRTAP6-2Q3LI66 62 aa3.06□□□□□ -1.92
FN1-211ENST00000443816 HMCN2Q8NDA2 5059 aa3.05□□□□□ -1.92
FN1-211ENST00000443816 KRTAP4-9Q9BYQ8 210 aa3.05□□□□□ -1.92
FN1-211ENST00000443816 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
FN1-211ENST00000443816 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
FN1-211ENST00000443816 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
FN1-211ENST00000443816 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
FN1-211ENST00000443816 KRTAP9-9Q9BYP9 154 aa2.9□□□□□ -1.94
FN1-211ENST00000443816 KRTAP9-6A8MVA2 160 aa2.79□□□□□ -1.96
FN1-211ENST00000443816 FSIP2Q5CZC0 6907 aa2.78□□□□□ -1.96
FN1-211ENST00000443816 FAT4Q6V0I7 4981 aa2.77□□□□□ -1.97
FN1-211ENST00000443816 SYNE1Q8NF91 8797 aaKnown RBP2.77□□□□□ -1.97
FN1-211ENST00000443816 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
FN1-211ENST00000443816 EPPK1P58107 5090 aaKnown RBP2.7□□□□□ -1.98
FN1-211ENST00000443816 RNF213Q63HN8 5207 aa2.66□□□□□ -1.98
FN1-211ENST00000443816 MUC2Q02817 5179 aa2.62□□□□□ -1.99
FN1-211ENST00000443816 ABCA13Q86UQ4 5058 aa2.6□□□□□ -1.99
FN1-211ENST00000443816 KRTAP4-6Q9BYQ5 205 aa2.57□□□□□ -2
FN1-211ENST00000443816 KRTAP20-2Q3LI61 65 aa2.55□□□□□ -2
FN1-211ENST00000443816 UBR4Q5T4S7 5183 aa2.55□□□□□ -2
FN1-211ENST00000443816 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
FN1-211ENST00000443816 OBSCNQ5VST9 7968 aa2.46□□□□□ -2.02
FN1-211ENST00000443816 NEBP20929 6669 aa2.4□□□□□ -2.03
FN1-211ENST00000443816 KRTAP4-11Q9BYQ6 195 aa2.38□□□□□ -2.03
FN1-211ENST00000443816 KMT2DO14686 5537 aa2.38□□□□□ -2.03
FN1-211ENST00000443816 MACF1Q9UPN3 7388 aaKnown RBP2.35□□□□□ -2.03
FN1-211ENST00000443816 DSTQ03001 7570 aaKnown RBP2.29□□□□□ -2.04
FN1-211ENST00000443816 KRTAP4-12Q9BQ66 201 aa2.27□□□□□ -2.05
FN1-211ENST00000443816 KRTAP4-2Q9BYR5 136 aa2.27□□□□□ -2.05
FN1-211ENST00000443816 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
FN1-211ENST00000443816 FCGBPQ9Y6R7 5405 aaPredicted RBP2.19□□□□□ -2.06
FN1-211ENST00000443816 KRTAP5-5Q701N2 237 aaPredicted RBP2.18□□□□□ -2.06
FN1-211ENST00000443816 SSPOA2VEC9 5147 aa2.15□□□□□ -2.07
FN1-211ENST00000443816 KRTAP5-3Q6L8H2 238 aa2.12□□□□□ -2.07
FN1-211ENST00000443816 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
FN1-211ENST00000443816 USH2AO75445 5202 aa2.04□□□□□ -2.08
FN1-211ENST00000443816 GPR98Q8WXG9 6306 aa1.99□□□□□ -2.09
FN1-211ENST00000443816 MUC12Q9UKN1 5478 aa1.98□□□□□ -2.09
FN1-211ENST00000443816 MDN1Q9NU22 5596 aa1.98□□□□□ -2.09
FN1-211ENST00000443816 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
FN1-211ENST00000443816 MUC5ACP98088 5654 aa1.89□□□□□ -2.11
FN1-211ENST00000443816 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
FN1-211ENST00000443816 KRTAP5-2Q701N4 177 aa1.81□□□□□ -2.12
FN1-211ENST00000443816 KRTAP5-10Q6L8G5 202 aa1.73□□□□□ -2.13
FN1-211ENST00000443816 KRTAP5-11Q6L8G4 156 aa1.68□□□□□ -2.14
FN1-211ENST00000443816 MUC5BQ9HC84 5762 aaPredicted RBP1.63□□□□□ -2.15
FN1-211ENST00000443816 HMCN1Q96RW7 5635 aa1.56□□□□□ -2.16
FN1-211ENST00000443816 KRTAP5-1Q6L8H4 278 aa1.56□□□□□ -2.16
FN1-211ENST00000443816 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
FN1-211ENST00000443816 AHNAK2Q8IVF2 5795 aa1.47□□□□□ -2.17
FN1-211ENST00000443816 KRTAP5-7Q6L8G8 165 aa1.47□□□□□ -2.17
FN1-211ENST00000443816 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.45□□□□□ -2.18
FN1-211ENST00000443816 AHNAKQ09666 5890 aaKnown RBP1.34□□□□□ -2.2
FN1-211ENST00000443816 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
FN1-211ENST00000443816 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms