RNA–Protein interactions for RNA: ENST00000440394.7

ERC1-205, Transcript of ELKS/RAB6-interacting/CAST family member 1, humanhuman

TSL 1 (best)

Gene ERC1, Length 7,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERC1-205ENST00000440394 MT1MQ8N339 61 aa4.73□□□□□ -1.65
ERC1-205ENST00000440394 HMCN2Q8NDA2 5059 aa4.7□□□□□ -1.66
ERC1-205ENST00000440394 LCE3EQ5T5B0 92 aa4.69□□□□□ -1.66
ERC1-205ENST00000440394 LCE2DQ5TA82 110 aaPredicted RBP4.64□□□□□ -1.67
ERC1-205ENST00000440394 KRTAP19-7Q3SYF9 63 aa4.62□□□□□ -1.67
ERC1-205ENST00000440394 LOC100996750A0A140TA64 210 aa4.56□□□□□ -1.68
ERC1-205ENST00000440394 KRTAP4-3Q9BYR4 195 aa4.53□□□□□ -1.68
ERC1-205ENST00000440394 KRTAP9-2Q9BYQ4 174 aa4.52□□□□□ -1.69
ERC1-205ENST00000440394 UBR4Q5T4S7 5183 aa4.51□□□□□ -1.69
ERC1-205ENST00000440394 MT3P25713 68 aa4.48□□□□□ -1.69
ERC1-205ENST00000440394 KRTAP2-3P0C7H8 128 aa4.43□□□□□ -1.7
ERC1-205ENST00000440394 KRTAP2-4Q9BYR9 128 aa4.43□□□□□ -1.7
ERC1-205ENST00000440394 KRTAP2-1Q9BYU5 128 aa4.43□□□□□ -1.7
ERC1-205ENST00000440394 MT1AP04731 61 aa4.4□□□□□ -1.71
ERC1-205ENST00000440394 MT4P47944 62 aa4.3□□□□□ -1.72
ERC1-205ENST00000440394 PRM1P04553 51 aa4.29□□□□□ -1.72
ERC1-205ENST00000440394 KRTAP9-6A8MVA2 160 aa4.25□□□□□ -1.73
ERC1-205ENST00000440394 LCE1AQ5T7P2 110 aa4.22□□□□□ -1.73
ERC1-205ENST00000440394 MUC2Q02817 5179 aa4.22□□□□□ -1.73
ERC1-205ENST00000440394 FSIP2Q5CZC0 6907 aa4.21□□□□□ -1.74
ERC1-205ENST00000440394 KRTAP9-6A0A140TA67 174 aa4.21□□□□□ -1.74
ERC1-205ENST00000440394 LCE5AQ5TCM9 118 aa4.2□□□□□ -1.74
ERC1-205ENST00000440394 KRTAP4-9Q9BYQ8 210 aa4.16□□□□□ -1.74
ERC1-205ENST00000440394 KRTAP6-3Q3LI67 103 aa4.15□□□□□ -1.75
ERC1-205ENST00000440394 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
ERC1-205ENST00000440394 LCE1DQ5T752 114 aa4.08□□□□□ -1.76
ERC1-205ENST00000440394 USH2AO75445 5202 aa4.06□□□□□ -1.76
ERC1-205ENST00000440394 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
ERC1-205ENST00000440394 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
ERC1-205ENST00000440394 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
ERC1-205ENST00000440394 SYNE2Q8WXH0 6885 aaKnown RBP3.97□□□□□ -1.77
ERC1-205ENST00000440394 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
ERC1-205ENST00000440394 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.77
ERC1-205ENST00000440394 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
ERC1-205ENST00000440394 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
ERC1-205ENST00000440394 LCE4AQ5TA78 99 aa3.94□□□□□ -1.78
ERC1-205ENST00000440394 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
ERC1-205ENST00000440394 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
ERC1-205ENST00000440394 KRTAP5-9P26371 169 aa3.72□□□□□ -1.81
ERC1-205ENST00000440394 KMT2DO14686 5537 aa3.69□□□□□ -1.82
ERC1-205ENST00000440394 SSPOA2VEC9 5147 aa3.68□□□□□ -1.82
ERC1-205ENST00000440394 FCGBPQ9Y6R7 5405 aaPredicted RBP3.63□□□□□ -1.83
ERC1-205ENST00000440394 MACF1Q9UPN3 7388 aaKnown RBP3.59□□□□□ -1.83
ERC1-205ENST00000440394 NEBP20929 6669 aa3.52□□□□□ -1.85
ERC1-205ENST00000440394 MUC12Q9UKN1 5478 aa3.42□□□□□ -1.86
ERC1-205ENST00000440394 KRTAP20-2Q3LI61 65 aa3.39□□□□□ -1.87
ERC1-205ENST00000440394 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
ERC1-205ENST00000440394 KRTAP4-6Q9BYQ5 205 aa3.38□□□□□ -1.87
ERC1-205ENST00000440394 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
ERC1-205ENST00000440394 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
ERC1-205ENST00000440394 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
ERC1-205ENST00000440394 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
ERC1-205ENST00000440394 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
ERC1-205ENST00000440394 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.89
ERC1-205ENST00000440394 MDN1Q9NU22 5596 aa3.2□□□□□ -1.9
ERC1-205ENST00000440394 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
ERC1-205ENST00000440394 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
ERC1-205ENST00000440394 GPR98Q8WXG9 6306 aa2.83□□□□□ -1.96
ERC1-205ENST00000440394 KRTAP4-12Q9BQ66 201 aa2.82□□□□□ -1.96
ERC1-205ENST00000440394 KRTAP4-2Q9BYR5 136 aa2.82□□□□□ -1.96
ERC1-205ENST00000440394 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
ERC1-205ENST00000440394 KRTAP5-3Q6L8H2 238 aa2.79□□□□□ -1.96
ERC1-205ENST00000440394 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
ERC1-205ENST00000440394 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
ERC1-205ENST00000440394 HMCN1Q96RW7 5635 aa2.6□□□□□ -1.99
ERC1-205ENST00000440394 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
ERC1-205ENST00000440394 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
ERC1-205ENST00000440394 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
ERC1-205ENST00000440394 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
ERC1-205ENST00000440394 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
ERC1-205ENST00000440394 KRTAP5-1Q6L8H4 278 aa2.3□□□□□ -2.04
ERC1-205ENST00000440394 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
ERC1-205ENST00000440394 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
ERC1-205ENST00000440394 AHNAKQ09666 5890 aaKnown RBP2.09□□□□□ -2.07
ERC1-205ENST00000440394 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
ERC1-205ENST00000440394 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
ERC1-205ENST00000440394 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
ERC1-205ENST00000440394 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 113.1 ms