RNA–Protein interactions for RNA: ENST00000440394.7

ERC1-205, Transcript of ELKS/RAB6-interacting/CAST family member 1, humanhuman

TSL 1 (best)

Gene ERC1, Length 7,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERC1-205ENST00000440394 NISCHQ9Y2I1 1504 aa26.23■■□□□ 1.79
ERC1-205ENST00000440394 DCAF8L2P0C7V8 631 aa25.76■■□□□ 1.71
ERC1-205ENST00000440394 SUPT5HO00267 1087 aaKnown RBP24.75■■□□□ 1.55
ERC1-205ENST00000440394 SHROOM4Q9ULL8 1493 aa24.53■■□□□ 1.52
ERC1-205ENST00000440394 EHMT2Q96KQ7 1210 aa23.52■■□□□ 1.36
ERC1-205ENST00000440394 APLP2Q06481 763 aa23.22■■□□□ 1.31
ERC1-205ENST00000440394 FAM9AQ8IZU1 332 aaPredicted RBP23.21■■□□□ 1.31
ERC1-205ENST00000440394 TRIM41Q8WV44 630 aa23.06■■□□□ 1.28
ERC1-205ENST00000440394 PCGF6Q9BYE7 350 aa23.04■■□□□ 1.28
ERC1-205ENST00000440394 ZEB1P37275 1124 aaPredicted RBP22.79■■□□□ 1.24
ERC1-205ENST00000440394 TTBK1Q5TCY1 1321 aaPredicted RBP22.76■■□□□ 1.23
ERC1-205ENST00000440394 PELP1Q8IZL8 1130 aaKnown RBP22.76■■□□□ 1.23
ERC1-205ENST00000440394 UBTFP17480 764 aaKnown RBP22.59■■□□□ 1.21
ERC1-205ENST00000440394 RANGAP1P46060 587 aaPredicted RBP22.56■■□□□ 1.2
ERC1-205ENST00000440394 CCER1Q8TC90 406 aaPredicted RBP22.54■■□□□ 1.2
ERC1-205ENST00000440394 CHIC1Q5VXU3 224 aa22.45■■□□□ 1.18
ERC1-205ENST00000440394 TRIM26Q12899 539 aaPredicted RBP22.36■■□□□ 1.17
ERC1-205ENST00000440394 CENPBP07199 599 aaPredicted RBP22.35■■□□□ 1.17
ERC1-205ENST00000440394 ATP1B4Q9UN42 357 aaPredicted RBP22.31■■□□□ 1.16
ERC1-205ENST00000440394 LOC105371045A0A1W2PR82 267 aa22.16■■□□□ 1.14
ERC1-205ENST00000440394 HRCP23327 699 aa22.14■■□□□ 1.13
ERC1-205ENST00000440394 PPARGC1BQ86YN6 1023 aaKnown RBP22.14■■□□□ 1.13
ERC1-205ENST00000440394 ABCC9O60706 1549 aa22.08■■□□□ 1.13
ERC1-205ENST00000440394 ZCCHC6Q5VYS8 1495 aaKnown RBP21.84■■□□□ 1.09
ERC1-205ENST00000440394 YTHDC1Q96MU7 727 aaKnown RBP21.8■■□□□ 1.08
ERC1-205ENST00000440394 PABPN1Q86U42 306 aaKnown RBP eCLIP21.77■■□□□ 1.08
ERC1-205ENST00000440394 NEFLP07196 543 aa21.73■■□□□ 1.07
ERC1-205ENST00000440394 HNRNPUL2Q1KMD3 747 aaKnown RBP21.71■■□□□ 1.07
ERC1-205ENST00000440394 ITGAEP38570 1179 aa21.7■■□□□ 1.06
ERC1-205ENST00000440394 CCDC180Q9P1Z9 1646 aa21.68■■□□□ 1.06
ERC1-205ENST00000440394 ERICH6Q7L0X2 663 aa21.66■■□□□ 1.06
ERC1-205ENST00000440394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.58■■□□□ 1.05
ERC1-205ENST00000440394 SCRIBQ14160 1630 aa21.48■■□□□ 1.03
ERC1-205ENST00000440394 DIEXFQ68CQ4 756 aaKnown RBP21.35■■□□□ 1.01
ERC1-205ENST00000440394 CSRNP3Q8WYN3 585 aa21.32■■□□□ 1
ERC1-205ENST00000440394 FAM50AQ14320 339 aaKnown RBP21.32■■□□□ 1
ERC1-205ENST00000440394 MYT1LQ9UL68 1186 aa21.28■■□□□ 1
ERC1-205ENST00000440394 MYT1Q01538 1121 aa21.25■□□□□ 0.99
ERC1-205ENST00000440394 POLR3GLQ9BT43 218 aa21.25■□□□□ 0.99
ERC1-205ENST00000440394 DCAF1Q9Y4B6 1507 aa21.2■□□□□ 0.98
ERC1-205ENST00000440394 TRIM52Q96A61 297 aa21.11■□□□□ 0.97
ERC1-205ENST00000440394 NEUROD1Q13562 356 aa21.06■□□□□ 0.96
ERC1-205ENST00000440394 ZNF316A6NFI3 1004 aaPredicted RBP21.02■□□□□ 0.96
ERC1-205ENST00000440394 RB1CC1Q8TDY2 1594 aa21.02■□□□□ 0.95
ERC1-205ENST00000440394 RSF1Q96T23 1441 aaPredicted RBP20.97■□□□□ 0.95
ERC1-205ENST00000440394 CNGB1Q14028 1251 aaPredicted RBP20.95■□□□□ 0.94
ERC1-205ENST00000440394 NACADO15069 1562 aa20.93■□□□□ 0.94
ERC1-205ENST00000440394 P3H3Q8IVL6 736 aa20.92■□□□□ 0.94
ERC1-205ENST00000440394 ANP32CO43423 234 aa20.87■□□□□ 0.93
ERC1-205ENST00000440394 FBLN2P98095 1184 aa20.87■□□□□ 0.93
ERC1-205ENST00000440394 DAXXQ9UER7 740 aaPredicted RBP20.86■□□□□ 0.93
ERC1-205ENST00000440394 MYO15BQ96JP2 1530 aa20.79■□□□□ 0.92
ERC1-205ENST00000440394 GTF3C3Q9Y5Q9 886 aa20.78■□□□□ 0.92
ERC1-205ENST00000440394 EEA1Q15075 1411 aa20.76■□□□□ 0.91
ERC1-205ENST00000440394 SLC4A1APQ9BWU0 796 aaKnown RBP20.75■□□□□ 0.91
ERC1-205ENST00000440394 CDK11AQ9UQ88 783 aaPredicted RBP20.74■□□□□ 0.91
ERC1-205ENST00000440394 ZNF326Q5BKZ1 582 aaKnown RBP20.74■□□□□ 0.91
ERC1-205ENST00000440394 ARID3CA6NKF2 412 aa20.69■□□□□ 0.9
ERC1-205ENST00000440394 ACIN1Q9UKV3 1341 aaKnown RBP20.68■□□□□ 0.9
ERC1-205ENST00000440394 CLIP1P30622 1438 aa20.67■□□□□ 0.9
ERC1-205ENST00000440394 GOLGA3Q08378 1498 aa20.65■□□□□ 0.9
ERC1-205ENST00000440394 WRNQ14191 1432 aaPredicted RBP eCLIP20.6■□□□□ 0.89
ERC1-205ENST00000440394 ZNF777Q9ULD5 760 aaPredicted RBP20.6■□□□□ 0.89
ERC1-205ENST00000440394 BAZ1AQ9NRL2 1556 aaPredicted RBP20.6■□□□□ 0.89
ERC1-205ENST00000440394 CEP162Q5TB80 1403 aa20.58■□□□□ 0.89
ERC1-205ENST00000440394 BAZ1BQ9UIG0 1483 aaKnown RBP20.58■□□□□ 0.89
ERC1-205ENST00000440394 TONSLQ96HA7 1378 aa20.57■□□□□ 0.88
ERC1-205ENST00000440394 BCANQ96GW7 911 aa20.57■□□□□ 0.88
ERC1-205ENST00000440394 TNIKQ9UKE5 1360 aa20.51■□□□□ 0.87
ERC1-205ENST00000440394 CLSPNQ9HAW4 1339 aa20.5■□□□□ 0.87
ERC1-205ENST00000440394 CECR2Q9BXF3 1484 aa20.47■□□□□ 0.87
ERC1-205ENST00000440394 CEP164Q9UPV0 1460 aa20.46■□□□□ 0.87
ERC1-205ENST00000440394 RTL5Q5HYW3 569 aaPredicted RBP20.46■□□□□ 0.87
ERC1-205ENST00000440394 MTUS2Q5JR59 1369 aa20.44■□□□□ 0.86
ERC1-205ENST00000440394 KIF27Q86VH2 1401 aa20.41■□□□□ 0.86
ERC1-205ENST00000440394 CHIC2Q9UKJ5 165 aa20.34■□□□□ 0.85
ERC1-205ENST00000440394 DDX10Q13206 875 aaKnown RBP20.32■□□□□ 0.84
ERC1-205ENST00000440394 MROH2BQ7Z745 1585 aa20.28■□□□□ 0.84
ERC1-205ENST00000440394 CHMP7Q8WUX9 453 aaPredicted RBP20.27■□□□□ 0.84
ERC1-205ENST00000440394 CANXP27824 592 aaKnown RBP20.25■□□□□ 0.83
ERC1-205ENST00000440394 TSPY4P0CV99 314 aa20.23■□□□□ 0.83
ERC1-205ENST00000440394 TSPY10P0CW01 314 aa20.23■□□□□ 0.83
ERC1-205ENST00000440394 NEFMP07197 916 aa20.21■□□□□ 0.83
ERC1-205ENST00000440394 HNRNPUQ00839 825 aaKnown RBP eCLIP20.2■□□□□ 0.82
ERC1-205ENST00000440394 FKBP8Q14318 412 aa20.19■□□□□ 0.82
ERC1-205ENST00000440394 CCDC88BA6NC98 1476 aa20.19■□□□□ 0.82
ERC1-205ENST00000440394 SOGA1O94964 1423 aa20.18■□□□□ 0.82
ERC1-205ENST00000440394 NPM1P06748 294 aaKnown RBP eCLIP20.17■□□□□ 0.82
ERC1-205ENST00000440394 MIER1Q8N108 512 aa20.17■□□□□ 0.82
ERC1-205ENST00000440394 ZBTB47Q9UFB7 747 aaPredicted RBP20.16■□□□□ 0.82
ERC1-205ENST00000440394 FAM9BQ8IZU0 186 aa20.13■□□□□ 0.81
ERC1-205ENST00000440394 RRP7BPQ9NSQ0 103 aa20.12■□□□□ 0.81
ERC1-205ENST00000440394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.11■□□□□ 0.811e-6■■■□□ 17.5
ERC1-205ENST00000440394 SMARCA2P51531 1590 aa20.1■□□□□ 0.81
ERC1-205ENST00000440394 CHGAP10645 457 aaKnown RBP20.09■□□□□ 0.81
ERC1-205ENST00000440394 ANP32AP39687 249 aaKnown RBP20.09■□□□□ 0.81
ERC1-205ENST00000440394 EIF4G2P78344 907 aaKnown RBP eCLIP20.09■□□□□ 0.81
ERC1-205ENST00000440394 TOP2AP11388 1531 aaKnown RBP20.08■□□□□ 0.81
ERC1-205ENST00000440394 FHAD1B1AJZ9 1412 aa20.07■□□□□ 0.8
ERC1-205ENST00000440394 PLEKHD1A6NEE1 506 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms