RNA–Protein interactions for RNA: ENST00000439649.7

GFRA1-204, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GFRA1, Length 9,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-204ENST00000439649 HERC1Q15751 4861 aa3.35□□□□□ -1.87
GFRA1-204ENST00000439649 KMT2CQ8NEZ4 4911 aaKnown RBP3.34□□□□□ -1.87
GFRA1-204ENST00000439649 KRTAP17-1Q9BYP8 105 aa3.31□□□□□ -1.88
GFRA1-204ENST00000439649 HYDINQ4G0P3 5121 aa3.3□□□□□ -1.88
GFRA1-204ENST00000439649 LCE5AQ5TCM9 118 aa3.3□□□□□ -1.88
GFRA1-204ENST00000439649 KRTAP9-2Q9BYQ4 174 aa3.28□□□□□ -1.88
GFRA1-204ENST00000439649 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
GFRA1-204ENST00000439649 HERC2O95714 4834 aa3.25□□□□□ -1.89
GFRA1-204ENST00000439649 BIRC6Q9NR09 4857 aa3.25□□□□□ -1.89
GFRA1-204ENST00000439649 LCE4AQ5TA78 99 aa3.24□□□□□ -1.89
GFRA1-204ENST00000439649 KRTAP4-3Q9BYR4 195 aa3.24□□□□□ -1.89
GFRA1-204ENST00000439649 RYR2Q92736 4967 aa3.23□□□□□ -1.89
GFRA1-204ENST00000439649 SYNE2Q8WXH0 6885 aaKnown RBP3.22□□□□□ -1.89
GFRA1-204ENST00000439649 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
GFRA1-204ENST00000439649 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
GFRA1-204ENST00000439649 KRTAP9-4Q9BYQ2 154 aa3.16□□□□□ -1.9
GFRA1-204ENST00000439649 KRTAP4-9Q9BYQ8 210 aa3.16□□□□□ -1.9
GFRA1-204ENST00000439649 KRTAP9-6A0A140TA67 174 aa3.13□□□□□ -1.91
GFRA1-204ENST00000439649 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
GFRA1-204ENST00000439649 EPPK1P58107 5090 aaKnown RBP3.11□□□□□ -1.91
GFRA1-204ENST00000439649 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
GFRA1-204ENST00000439649 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
GFRA1-204ENST00000439649 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
GFRA1-204ENST00000439649 KRTAP6-3Q3LI67 103 aa3.08□□□□□ -1.92
GFRA1-204ENST00000439649 LPAP08519 4548 aa3.08□□□□□ -1.92
GFRA1-204ENST00000439649 LCE2AQ5TA79 106 aaPredicted RBP3.07□□□□□ -1.92
GFRA1-204ENST00000439649 KIAA1109Q2LD37 5005 aa3.05□□□□□ -1.92
GFRA1-204ENST00000439649 KRTAP9-6A8MVA2 160 aa3.03□□□□□ -1.92
GFRA1-204ENST00000439649 KRTAP2-2Q9BYT5 123 aa3.03□□□□□ -1.92
GFRA1-204ENST00000439649 KRTAP9-7A8MTY7 169 aa2.99□□□□□ -1.93
GFRA1-204ENST00000439649 KRTAP9-9Q9BYP9 154 aa2.93□□□□□ -1.94
GFRA1-204ENST00000439649 RNF213Q63HN8 5207 aa2.89□□□□□ -1.95
GFRA1-204ENST00000439649 MUC2Q02817 5179 aa2.85□□□□□ -1.95
GFRA1-204ENST00000439649 ABCA13Q86UQ4 5058 aa2.83□□□□□ -1.96
GFRA1-204ENST00000439649 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.82□□□□□ -1.96
GFRA1-204ENST00000439649 UBR4Q5T4S7 5183 aa2.78□□□□□ -1.96
GFRA1-204ENST00000439649 FSIP2Q5CZC0 6907 aa2.77□□□□□ -1.97
GFRA1-204ENST00000439649 HMCN2Q8NDA2 5059 aa2.75□□□□□ -1.97
GFRA1-204ENST00000439649 FAT4Q6V0I7 4981 aa2.7□□□□□ -1.98
GFRA1-204ENST00000439649 MDN1Q9NU22 5596 aa2.63□□□□□ -1.99
GFRA1-204ENST00000439649 KRTAP5-9P26371 169 aa2.61□□□□□ -1.99
GFRA1-204ENST00000439649 KRTAP4-11Q9BYQ6 195 aa2.6□□□□□ -1.99
GFRA1-204ENST00000439649 GPR98Q8WXG9 6306 aa2.51□□□□□ -2.01
GFRA1-204ENST00000439649 NEBP20929 6669 aa2.51□□□□□ -2.01
GFRA1-204ENST00000439649 KRTAP20-2Q3LI61 65 aa2.49□□□□□ -2.01
GFRA1-204ENST00000439649 KRTAP5-4Q6L8H1 288 aa2.41□□□□□ -2.02
GFRA1-204ENST00000439649 KRTAP4-6Q9BYQ5 205 aa2.4□□□□□ -2.02
GFRA1-204ENST00000439649 FCGBPQ9Y6R7 5405 aaPredicted RBP2.38□□□□□ -2.03
GFRA1-204ENST00000439649 DSTQ03001 7570 aaKnown RBP2.38□□□□□ -2.03
GFRA1-204ENST00000439649 KMT2DO14686 5537 aa2.37□□□□□ -2.03
GFRA1-204ENST00000439649 USH2AO75445 5202 aa2.37□□□□□ -2.03
GFRA1-204ENST00000439649 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
GFRA1-204ENST00000439649 KRTAP5-5Q701N2 237 aaPredicted RBP2.3□□□□□ -2.04
GFRA1-204ENST00000439649 MACF1Q9UPN3 7388 aaKnown RBP2.28□□□□□ -2.04
GFRA1-204ENST00000439649 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
GFRA1-204ENST00000439649 MUC12Q9UKN1 5478 aa2.21□□□□□ -2.06
GFRA1-204ENST00000439649 KRTAP4-12Q9BQ66 201 aa2.19□□□□□ -2.06
GFRA1-204ENST00000439649 KRTAP4-2Q9BYR5 136 aa2.19□□□□□ -2.06
GFRA1-204ENST00000439649 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
GFRA1-204ENST00000439649 SSPOA2VEC9 5147 aa2.14□□□□□ -2.07
GFRA1-204ENST00000439649 KRTAP5-3Q6L8H2 238 aa2.11□□□□□ -2.07
GFRA1-204ENST00000439649 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.08
GFRA1-204ENST00000439649 HMCN1Q96RW7 5635 aa2.05□□□□□ -2.08
GFRA1-204ENST00000439649 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
GFRA1-204ENST00000439649 AHNAK2Q8IVF2 5795 aa1.97□□□□□ -2.09
GFRA1-204ENST00000439649 KRTAP5-10Q6L8G5 202 aa1.93□□□□□ -2.1
GFRA1-204ENST00000439649 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
GFRA1-204ENST00000439649 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
GFRA1-204ENST00000439649 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
GFRA1-204ENST00000439649 KRTAP5-2Q701N4 177 aa1.76□□□□□ -2.13
GFRA1-204ENST00000439649 KRTAP5-8O75690 187 aa1.72□□□□□ -2.13
GFRA1-204ENST00000439649 KRTAP5-1Q6L8H4 278 aa1.61□□□□□ -2.15
GFRA1-204ENST00000439649 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.56□□□□□ -2.16
GFRA1-204ENST00000439649 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
GFRA1-204ENST00000439649 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
GFRA1-204ENST00000439649 KRTAP5-7Q6L8G8 165 aa1.24□□□□□ -2.21
GFRA1-204ENST00000439649 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 61.7 ms