RNA–Protein interactions for RNA: ENST00000437974.5

ARHGEF28-204, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARHGEF28, Length 5,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-204ENST00000437974 EPPK1P58107 5090 aaKnown RBP5.69□□□□□ -1.5
ARHGEF28-204ENST00000437974 LOC100996750A0A140TA64 210 aa5.64□□□□□ -1.51
ARHGEF28-204ENST00000437974 KRTAP9-6A0A140TA67 174 aa5.57□□□□□ -1.52
ARHGEF28-204ENST00000437974 KRTAP4-3Q9BYR4 195 aa5.57□□□□□ -1.52
ARHGEF28-204ENST00000437974 LCE1BQ5T7P3 118 aa5.54□□□□□ -1.52
ARHGEF28-204ENST00000437974 LCE1DQ5T752 114 aa5.51□□□□□ -1.53
ARHGEF28-204ENST00000437974 ABCA13Q86UQ4 5058 aa5.49□□□□□ -1.53
ARHGEF28-204ENST00000437974 PRM1P04553 51 aa5.46□□□□□ -1.54
ARHGEF28-204ENST00000437974 LCE2AQ5TA79 106 aaPredicted RBP5.45□□□□□ -1.54
ARHGEF28-204ENST00000437974 KRTAP19-7Q3SYF9 63 aa5.38□□□□□ -1.55
ARHGEF28-204ENST00000437974 KRTAP20-1Q3LI63 56 aa5.38□□□□□ -1.55
ARHGEF28-204ENST00000437974 MT1AP04731 61 aa5.35□□□□□ -1.55
ARHGEF28-204ENST00000437974 FAT4Q6V0I7 4981 aa5.35□□□□□ -1.55
ARHGEF28-204ENST00000437974 HMCN2Q8NDA2 5059 aa5.34□□□□□ -1.55
ARHGEF28-204ENST00000437974 RNF213Q63HN8 5207 aa5.27□□□□□ -1.57
ARHGEF28-204ENST00000437974 KRTAP9-7A8MTY7 169 aa5.27□□□□□ -1.57
ARHGEF28-204ENST00000437974 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
ARHGEF28-204ENST00000437974 SYNE1Q8NF91 8797 aaKnown RBP5.23□□□□□ -1.57
ARHGEF28-204ENST00000437974 LCE5AQ5TCM9 118 aa5.23□□□□□ -1.57
ARHGEF28-204ENST00000437974 KRTAP2-3P0C7H8 128 aa5.21□□□□□ -1.58
ARHGEF28-204ENST00000437974 KRTAP2-4Q9BYR9 128 aa5.21□□□□□ -1.58
ARHGEF28-204ENST00000437974 KRTAP2-1Q9BYU5 128 aa5.21□□□□□ -1.58
ARHGEF28-204ENST00000437974 KRTAP6-3Q3LI67 103 aa5.19□□□□□ -1.58
ARHGEF28-204ENST00000437974 UBR4Q5T4S7 5183 aa5.18□□□□□ -1.58
ARHGEF28-204ENST00000437974 LCE1AQ5T7P2 110 aa5.18□□□□□ -1.58
ARHGEF28-204ENST00000437974 FSIP2Q5CZC0 6907 aa5.11□□□□□ -1.59
ARHGEF28-204ENST00000437974 KRTAP9-6A8MVA2 160 aa5.03□□□□□ -1.6
ARHGEF28-204ENST00000437974 SYNE2Q8WXH0 6885 aaKnown RBP5.03□□□□□ -1.6
ARHGEF28-204ENST00000437974 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
ARHGEF28-204ENST00000437974 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.02□□□□□ -1.61
ARHGEF28-204ENST00000437974 MUC2Q02817 5179 aa5□□□□□ -1.61
ARHGEF28-204ENST00000437974 KRTAP6-1Q3LI64 71 aa4.97□□□□□ -1.61
ARHGEF28-204ENST00000437974 KRTAP6-2Q3LI66 62 aa4.97□□□□□ -1.61
ARHGEF28-204ENST00000437974 KRTAP2-2Q9BYT5 123 aa4.96□□□□□ -1.61
ARHGEF28-204ENST00000437974 KRTAP9-4Q9BYQ2 154 aa4.94□□□□□ -1.62
ARHGEF28-204ENST00000437974 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
ARHGEF28-204ENST00000437974 LCE1CQ5T751 118 aa4.79□□□□□ -1.64
ARHGEF28-204ENST00000437974 LCE1EQ5T753 118 aa4.79□□□□□ -1.64
ARHGEF28-204ENST00000437974 LCE1FQ5T754 118 aa4.79□□□□□ -1.64
ARHGEF28-204ENST00000437974 KRTAP9-9Q9BYP9 154 aa4.47□□□□□ -1.69
ARHGEF28-204ENST00000437974 USH2AO75445 5202 aa4.43□□□□□ -1.7
ARHGEF28-204ENST00000437974 KMT2DO14686 5537 aa4.41□□□□□ -1.7
ARHGEF28-204ENST00000437974 FCGBPQ9Y6R7 5405 aaPredicted RBP4.38□□□□□ -1.71
ARHGEF28-204ENST00000437974 KRTAP5-9P26371 169 aa4.26□□□□□ -1.73
ARHGEF28-204ENST00000437974 NEBP20929 6669 aa4.21□□□□□ -1.74
ARHGEF28-204ENST00000437974 DSTQ03001 7570 aaKnown RBP4.19□□□□□ -1.74
ARHGEF28-204ENST00000437974 SSPOA2VEC9 5147 aa4.16□□□□□ -1.74
ARHGEF28-204ENST00000437974 KRTAP4-6Q9BYQ5 205 aa4.16□□□□□ -1.74
ARHGEF28-204ENST00000437974 MACF1Q9UPN3 7388 aaKnown RBP4.14□□□□□ -1.75
ARHGEF28-204ENST00000437974 KRTAP20-2Q3LI61 65 aa4.11□□□□□ -1.75
ARHGEF28-204ENST00000437974 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
ARHGEF28-204ENST00000437974 MUC12Q9UKN1 5478 aa3.94□□□□□ -1.78
ARHGEF28-204ENST00000437974 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
ARHGEF28-204ENST00000437974 GPR98Q8WXG9 6306 aa3.82□□□□□ -1.8
ARHGEF28-204ENST00000437974 MDN1Q9NU22 5596 aa3.81□□□□□ -1.8
ARHGEF28-204ENST00000437974 MUC19Q7Z5P9 8384 aa3.81□□□□□ -1.8
ARHGEF28-204ENST00000437974 KRTAP4-12Q9BQ66 201 aa3.8□□□□□ -1.8
ARHGEF28-204ENST00000437974 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
ARHGEF28-204ENST00000437974 KRTAP4-4Q9BYR3 166 aa3.79□□□□□ -1.8
ARHGEF28-204ENST00000437974 KRTAP5-5Q701N2 237 aaPredicted RBP3.76□□□□□ -1.81
ARHGEF28-204ENST00000437974 KRTAP5-3Q6L8H2 238 aa3.37□□□□□ -1.87
ARHGEF28-204ENST00000437974 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
ARHGEF28-204ENST00000437974 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
ARHGEF28-204ENST00000437974 KRTAP5-8O75690 187 aa3.08□□□□□ -1.92
ARHGEF28-204ENST00000437974 HMCN1Q96RW7 5635 aa3.02□□□□□ -1.93
ARHGEF28-204ENST00000437974 KRTAP5-10Q6L8G5 202 aa2.96□□□□□ -1.94
ARHGEF28-204ENST00000437974 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
ARHGEF28-204ENST00000437974 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
ARHGEF28-204ENST00000437974 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
ARHGEF28-204ENST00000437974 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
ARHGEF28-204ENST00000437974 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
ARHGEF28-204ENST00000437974 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
ARHGEF28-204ENST00000437974 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
ARHGEF28-204ENST00000437974 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
ARHGEF28-204ENST00000437974 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
ARHGEF28-204ENST00000437974 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
ARHGEF28-204ENST00000437974 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 174.5 ms