RNA–Protein interactions for RNA: ENST00000430249.6

CPS1-203, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 5,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-203ENST00000430249 KRTAP9-2Q9BYQ4 174 aa2.07□□□□□ -2.08
CPS1-203ENST00000430249 KRTAP4-7Q9BYR0 210 aa2.07□□□□□ -2.08
CPS1-203ENST00000430249 PRM1P04553 51 aa2.06□□□□□ -2.08
CPS1-203ENST00000430249 KRTAP19-7Q3SYF9 63 aa2.05□□□□□ -2.08
CPS1-203ENST00000430249 KRTAP6-3Q3LI67 103 aa2.03□□□□□ -2.08
CPS1-203ENST00000430249 KIAA1109Q2LD37 5005 aa2.02□□□□□ -2.09
CPS1-203ENST00000430249 MT4P47944 62 aa2.02□□□□□ -2.09
CPS1-203ENST00000430249 LCE4AQ5TA78 99 aa2.02□□□□□ -2.09
CPS1-203ENST00000430249 KRTAP9-6A0A140TA67 174 aa2□□□□□ -2.09
CPS1-203ENST00000430249 KRTAP20-1Q3LI63 56 aa1.99□□□□□ -2.09
CPS1-203ENST00000430249 LOC100996750A0A140TA64 210 aa1.98□□□□□ -2.09
CPS1-203ENST00000430249 KRTAP9-4Q9BYQ2 154 aa1.96□□□□□ -2.1
CPS1-203ENST00000430249 HYDINQ4G0P3 5121 aa1.96□□□□□ -2.1
CPS1-203ENST00000430249 LCE1DQ5T752 114 aa1.96□□□□□ -2.1
CPS1-203ENST00000430249 LCE1BQ5T7P3 118 aa1.95□□□□□ -2.1
CPS1-203ENST00000430249 KRTAP4-3Q9BYR4 195 aa1.94□□□□□ -2.1
CPS1-203ENST00000430249 LCE5AQ5TCM9 118 aa1.93□□□□□ -2.1
CPS1-203ENST00000430249 LPAP08519 4548 aa1.91□□□□□ -2.1
CPS1-203ENST00000430249 KRTAP2-2Q9BYT5 123 aa1.88□□□□□ -2.11
CPS1-203ENST00000430249 HMCN2Q8NDA2 5059 aa1.87□□□□□ -2.11
CPS1-203ENST00000430249 KRTAP9-7A8MTY7 169 aa1.86□□□□□ -2.11
CPS1-203ENST00000430249 KRTAP6-1Q3LI64 71 aa1.86□□□□□ -2.11
CPS1-203ENST00000430249 KRTAP6-2Q3LI66 62 aa1.84□□□□□ -2.11
CPS1-203ENST00000430249 RNF213Q63HN8 5207 aa1.84□□□□□ -2.12
CPS1-203ENST00000430249 ABCA13Q86UQ4 5058 aa1.83□□□□□ -2.12
CPS1-203ENST00000430249 EPPK1P58107 5090 aaKnown RBP1.83□□□□□ -2.12
CPS1-203ENST00000430249 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.82□□□□□ -2.12
CPS1-203ENST00000430249 FAT4Q6V0I7 4981 aa1.79□□□□□ -2.12
CPS1-203ENST00000430249 KRTAP4-6Q9BYQ5 205 aa1.79□□□□□ -2.12
CPS1-203ENST00000430249 KRTAP9-6A8MVA2 160 aa1.78□□□□□ -2.12
CPS1-203ENST00000430249 KRTAP4-9Q9BYQ8 210 aa1.78□□□□□ -2.12
CPS1-203ENST00000430249 KRTAP5-9P26371 169 aa1.72□□□□□ -2.13
CPS1-203ENST00000430249 LCE1CQ5T751 118 aa1.68□□□□□ -2.14
CPS1-203ENST00000430249 LCE1EQ5T753 118 aa1.68□□□□□ -2.14
CPS1-203ENST00000430249 LCE1FQ5T754 118 aa1.68□□□□□ -2.14
CPS1-203ENST00000430249 KRTAP9-9Q9BYP9 154 aa1.67□□□□□ -2.14
CPS1-203ENST00000430249 UBR4Q5T4S7 5183 aa1.65□□□□□ -2.14
CPS1-203ENST00000430249 SYNE2Q8WXH0 6885 aaKnown RBP1.62□□□□□ -2.15
CPS1-203ENST00000430249 GPR98Q8WXG9 6306 aa1.62□□□□□ -2.15
CPS1-203ENST00000430249 FSIP2Q5CZC0 6907 aa1.59□□□□□ -2.15
CPS1-203ENST00000430249 KRTAP5-4Q6L8H1 288 aa1.58□□□□□ -2.16
CPS1-203ENST00000430249 KRTAP20-2Q3LI61 65 aa1.57□□□□□ -2.16
CPS1-203ENST00000430249 NEBP20929 6669 aa1.53□□□□□ -2.16
CPS1-203ENST00000430249 KRTAP5-3Q6L8H2 238 aa1.51□□□□□ -2.17
CPS1-203ENST00000430249 SYNE1Q8NF91 8797 aaKnown RBP1.51□□□□□ -2.17
CPS1-203ENST00000430249 SSPOA2VEC9 5147 aa1.5□□□□□ -2.17
CPS1-203ENST00000430249 MACF1Q9UPN3 7388 aaKnown RBP1.45□□□□□ -2.18
CPS1-203ENST00000430249 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.45□□□□□ -2.18
CPS1-203ENST00000430249 MUC2Q02817 5179 aa1.44□□□□□ -2.18
CPS1-203ENST00000430249 KRTAP5-5Q701N2 237 aaPredicted RBP1.44□□□□□ -2.18
CPS1-203ENST00000430249 KRTAP4-11Q9BYQ6 195 aa1.44□□□□□ -2.18
CPS1-203ENST00000430249 USH2AO75445 5202 aa1.42□□□□□ -2.18
CPS1-203ENST00000430249 OBSCNQ5VST9 7968 aa1.39□□□□□ -2.19
CPS1-203ENST00000430249 KMT2DO14686 5537 aa1.38□□□□□ -2.19
CPS1-203ENST00000430249 KRTAP5-2Q701N4 177 aa1.38□□□□□ -2.19
CPS1-203ENST00000430249 DSTQ03001 7570 aaKnown RBP1.37□□□□□ -2.19
CPS1-203ENST00000430249 KRTAP4-2Q9BYR5 136 aa1.32□□□□□ -2.2
CPS1-203ENST00000430249 MUC12Q9UKN1 5478 aa1.32□□□□□ -2.2
CPS1-203ENST00000430249 KRTAP4-12Q9BQ66 201 aa1.31□□□□□ -2.2
CPS1-203ENST00000430249 MDN1Q9NU22 5596 aa1.31□□□□□ -2.2
CPS1-203ENST00000430249 FCGBPQ9Y6R7 5405 aaPredicted RBP1.25□□□□□ -2.21
CPS1-203ENST00000430249 KRTAP4-4Q9BYR3 166 aa1.25□□□□□ -2.21
CPS1-203ENST00000430249 MUC19Q7Z5P9 8384 aa1.23□□□□□ -2.21
CPS1-203ENST00000430249 MUC5ACP98088 5654 aa1.22□□□□□ -2.21
CPS1-203ENST00000430249 AHNAK2Q8IVF2 5795 aa1.19□□□□□ -2.22
CPS1-203ENST00000430249 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.23
CPS1-203ENST00000430249 KRTAP5-8O75690 187 aa1.11□□□□□ -2.23
CPS1-203ENST00000430249 KRTAP5-11Q6L8G4 156 aa1.11□□□□□ -2.23
CPS1-203ENST00000430249 HMCN1Q96RW7 5635 aa1.09□□□□□ -2.24
CPS1-203ENST00000430249 MUC5BQ9HC84 5762 aaPredicted RBP1.04□□□□□ -2.24
CPS1-203ENST00000430249 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
CPS1-203ENST00000430249 KRTAP5-1Q6L8H4 278 aa0.99□□□□□ -2.25
CPS1-203ENST00000430249 AHNAKQ09666 5890 aaKnown RBP0.99□□□□□ -2.25
CPS1-203ENST00000430249 KRTAP21-2Q3LI59 83 aa0.97□□□□□ -2.25
CPS1-203ENST00000430249 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
CPS1-203ENST00000430249 KRTAP5-7Q6L8G8 165 aa0.92□□□□□ -2.26
CPS1-203ENST00000430249 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 80.2 ms