RNA–Protein interactions for RNA: ENST00000426910.1

CROCCP1-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 1, humanhuman

BASIC

Gene CROCCP1, Length 5,675 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP1-201ENST00000426910 KRTAP4-3Q9BYR4 195 aa5.33□□□□□ -1.56
CROCCP1-201ENST00000426910 ABCA13Q86UQ4 5058 aa5.3□□□□□ -1.56
CROCCP1-201ENST00000426910 SYNE1Q8NF91 8797 aaKnown RBP5.27□□□□□ -1.57
CROCCP1-201ENST00000426910 MT1MQ8N339 61 aa5.26□□□□□ -1.57
CROCCP1-201ENST00000426910 LCE1BQ5T7P3 118 aa5.24□□□□□ -1.57
CROCCP1-201ENST00000426910 LCE2AQ5TA79 106 aaPredicted RBP5.23□□□□□ -1.57
CROCCP1-201ENST00000426910 MT3P25713 68 aa5.22□□□□□ -1.57
CROCCP1-201ENST00000426910 LCE1DQ5T752 114 aa5.18□□□□□ -1.58
CROCCP1-201ENST00000426910 PRM1P04553 51 aa5.18□□□□□ -1.58
CROCCP1-201ENST00000426910 FSIP2Q5CZC0 6907 aa5.18□□□□□ -1.58
CROCCP1-201ENST00000426910 HMCN2Q8NDA2 5059 aa5.17□□□□□ -1.58
CROCCP1-201ENST00000426910 UBR4Q5T4S7 5183 aa5.14□□□□□ -1.59
CROCCP1-201ENST00000426910 KRTAP9-6A0A140TA67 174 aa5.13□□□□□ -1.59
CROCCP1-201ENST00000426910 FAT4Q6V0I7 4981 aa5.1□□□□□ -1.59
CROCCP1-201ENST00000426910 KRTAP19-7Q3SYF9 63 aa5.08□□□□□ -1.6
CROCCP1-201ENST00000426910 KRTAP4-9Q9BYQ8 210 aa5.07□□□□□ -1.6
CROCCP1-201ENST00000426910 RNF213Q63HN8 5207 aa5.02□□□□□ -1.61
CROCCP1-201ENST00000426910 KRTAP2-3P0C7H8 128 aa4.96□□□□□ -1.62
CROCCP1-201ENST00000426910 KRTAP2-4Q9BYR9 128 aa4.96□□□□□ -1.62
CROCCP1-201ENST00000426910 KRTAP2-1Q9BYU5 128 aa4.96□□□□□ -1.62
CROCCP1-201ENST00000426910 LCE5AQ5TCM9 118 aa4.92□□□□□ -1.62
CROCCP1-201ENST00000426910 MUC2Q02817 5179 aa4.91□□□□□ -1.62
CROCCP1-201ENST00000426910 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
CROCCP1-201ENST00000426910 MT1AP04731 61 aa4.9□□□□□ -1.62
CROCCP1-201ENST00000426910 KRTAP20-1Q3LI63 56 aa4.88□□□□□ -1.63
CROCCP1-201ENST00000426910 KRTAP6-3Q3LI67 103 aa4.86□□□□□ -1.63
CROCCP1-201ENST00000426910 LCE1AQ5T7P2 110 aa4.84□□□□□ -1.63
CROCCP1-201ENST00000426910 SYNE2Q8WXH0 6885 aaKnown RBP4.83□□□□□ -1.64
CROCCP1-201ENST00000426910 KRTAP9-7A8MTY7 169 aa4.81□□□□□ -1.64
CROCCP1-201ENST00000426910 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.66
CROCCP1-201ENST00000426910 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
CROCCP1-201ENST00000426910 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.67□□□□□ -1.66
CROCCP1-201ENST00000426910 LCE4AQ5TA78 99 aa4.64□□□□□ -1.67
CROCCP1-201ENST00000426910 KRTAP6-2Q3LI66 62 aa4.6□□□□□ -1.67
CROCCP1-201ENST00000426910 LCE1CQ5T751 118 aa4.59□□□□□ -1.68
CROCCP1-201ENST00000426910 LCE1EQ5T753 118 aa4.59□□□□□ -1.68
CROCCP1-201ENST00000426910 LCE1FQ5T754 118 aa4.59□□□□□ -1.68
CROCCP1-201ENST00000426910 KRTAP2-2Q9BYT5 123 aa4.55□□□□□ -1.68
CROCCP1-201ENST00000426910 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
CROCCP1-201ENST00000426910 KMT2DO14686 5537 aa4.49□□□□□ -1.69
CROCCP1-201ENST00000426910 FCGBPQ9Y6R7 5405 aaPredicted RBP4.48□□□□□ -1.69
CROCCP1-201ENST00000426910 USH2AO75445 5202 aa4.4□□□□□ -1.7
CROCCP1-201ENST00000426910 DSTQ03001 7570 aaKnown RBP4.34□□□□□ -1.71
CROCCP1-201ENST00000426910 KRTAP5-9P26371 169 aa4.13□□□□□ -1.75
CROCCP1-201ENST00000426910 MACF1Q9UPN3 7388 aaKnown RBP4.12□□□□□ -1.75
CROCCP1-201ENST00000426910 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
CROCCP1-201ENST00000426910 SSPOA2VEC9 5147 aa4.03□□□□□ -1.76
CROCCP1-201ENST00000426910 MUC12Q9UKN1 5478 aa3.95□□□□□ -1.78
CROCCP1-201ENST00000426910 NEBP20929 6669 aa3.9□□□□□ -1.78
CROCCP1-201ENST00000426910 KRTAP4-11Q9BYQ6 195 aa3.88□□□□□ -1.79
CROCCP1-201ENST00000426910 KRTAP20-2Q3LI61 65 aa3.83□□□□□ -1.8
CROCCP1-201ENST00000426910 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
CROCCP1-201ENST00000426910 MUC19Q7Z5P9 8384 aa3.79□□□□□ -1.8
CROCCP1-201ENST00000426910 MDN1Q9NU22 5596 aa3.78□□□□□ -1.8
CROCCP1-201ENST00000426910 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
CROCCP1-201ENST00000426910 KRTAP5-4Q6L8H1 288 aa3.66□□□□□ -1.82
CROCCP1-201ENST00000426910 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
CROCCP1-201ENST00000426910 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
CROCCP1-201ENST00000426910 KRTAP4-2Q9BYR5 136 aa3.58□□□□□ -1.84
CROCCP1-201ENST00000426910 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
CROCCP1-201ENST00000426910 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
CROCCP1-201ENST00000426910 KRTAP5-3Q6L8H2 238 aa3.17□□□□□ -1.9
CROCCP1-201ENST00000426910 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
CROCCP1-201ENST00000426910 KRTAP5-8O75690 187 aa2.85□□□□□ -1.95
CROCCP1-201ENST00000426910 KRTAP5-2Q701N4 177 aa2.84□□□□□ -1.96
CROCCP1-201ENST00000426910 KRTAP5-10Q6L8G5 202 aa2.83□□□□□ -1.96
CROCCP1-201ENST00000426910 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
CROCCP1-201ENST00000426910 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
CROCCP1-201ENST00000426910 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
CROCCP1-201ENST00000426910 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
CROCCP1-201ENST00000426910 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
CROCCP1-201ENST00000426910 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
CROCCP1-201ENST00000426910 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.02
CROCCP1-201ENST00000426910 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
CROCCP1-201ENST00000426910 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
CROCCP1-201ENST00000426910 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
CROCCP1-201ENST00000426910 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 7.2 ms