RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 KRTAP9-2Q9BYQ4 174 aa5.4□□□□□ -1.54
ARHGEF28-203ENST00000426542 LCE1DQ5T752 114 aa5.4□□□□□ -1.55
ARHGEF28-203ENST00000426542 FLGP20930 4061 aaPredicted RBP5.38□□□□□ -1.55
ARHGEF28-203ENST00000426542 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
ARHGEF28-203ENST00000426542 KMT2CQ8NEZ4 4911 aaKnown RBP5.34□□□□□ -1.56
ARHGEF28-203ENST00000426542 MT1AP04731 61 aa5.18□□□□□ -1.58
ARHGEF28-203ENST00000426542 KRTAP9-6A0A140TA67 174 aa5.17□□□□□ -1.58
ARHGEF28-203ENST00000426542 KRTAP4-9Q9BYQ8 210 aa5.16□□□□□ -1.58
ARHGEF28-203ENST00000426542 KRTAP19-7Q3SYF9 63 aa5.15□□□□□ -1.59
ARHGEF28-203ENST00000426542 EPPK1P58107 5090 aaKnown RBP5.15□□□□□ -1.59
ARHGEF28-203ENST00000426542 LCE5AQ5TCM9 118 aa5.1□□□□□ -1.59
ARHGEF28-203ENST00000426542 KRTAP2-3P0C7H8 128 aa5.09□□□□□ -1.59
ARHGEF28-203ENST00000426542 KRTAP2-4Q9BYR9 128 aa5.09□□□□□ -1.59
ARHGEF28-203ENST00000426542 KRTAP2-1Q9BYU5 128 aa5.09□□□□□ -1.59
ARHGEF28-203ENST00000426542 LCE2AQ5TA79 106 aaPredicted RBP5.03□□□□□ -1.61
ARHGEF28-203ENST00000426542 KRTAP20-1Q3LI63 56 aa5.01□□□□□ -1.61
ARHGEF28-203ENST00000426542 ABCA13Q86UQ4 5058 aa4.93□□□□□ -1.62
ARHGEF28-203ENST00000426542 KRTAP9-7A8MTY7 169 aa4.89□□□□□ -1.63
ARHGEF28-203ENST00000426542 KRTAP6-1Q3LI64 71 aa4.87□□□□□ -1.63
ARHGEF28-203ENST00000426542 KRTAP6-2Q3LI66 62 aa4.87□□□□□ -1.63
ARHGEF28-203ENST00000426542 SYNE2Q8WXH0 6885 aaKnown RBP4.86□□□□□ -1.63
ARHGEF28-203ENST00000426542 HMCN2Q8NDA2 5059 aa4.86□□□□□ -1.63
ARHGEF28-203ENST00000426542 FAT4Q6V0I7 4981 aa4.82□□□□□ -1.64
ARHGEF28-203ENST00000426542 KRTAP9-4Q9BYQ2 154 aa4.81□□□□□ -1.64
ARHGEF28-203ENST00000426542 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
ARHGEF28-203ENST00000426542 RNF213Q63HN8 5207 aa4.79□□□□□ -1.64
ARHGEF28-203ENST00000426542 KRTAP6-3Q3LI67 103 aa4.78□□□□□ -1.64
ARHGEF28-203ENST00000426542 FSIP2Q5CZC0 6907 aa4.75□□□□□ -1.65
ARHGEF28-203ENST00000426542 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
ARHGEF28-203ENST00000426542 KRTAP9-6A8MVA2 160 aa4.72□□□□□ -1.65
ARHGEF28-203ENST00000426542 LCE4AQ5TA78 99 aa4.71□□□□□ -1.66
ARHGEF28-203ENST00000426542 LCE1CQ5T751 118 aa4.69□□□□□ -1.66
ARHGEF28-203ENST00000426542 LCE1EQ5T753 118 aa4.69□□□□□ -1.66
ARHGEF28-203ENST00000426542 LCE1FQ5T754 118 aa4.69□□□□□ -1.66
ARHGEF28-203ENST00000426542 UBR4Q5T4S7 5183 aa4.66□□□□□ -1.66
ARHGEF28-203ENST00000426542 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.64□□□□□ -1.67
ARHGEF28-203ENST00000426542 MUC2Q02817 5179 aa4.63□□□□□ -1.67
ARHGEF28-203ENST00000426542 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
ARHGEF28-203ENST00000426542 OBSCNQ5VST9 7968 aa4.53□□□□□ -1.68
ARHGEF28-203ENST00000426542 KRTAP9-9Q9BYP9 154 aa4.23□□□□□ -1.73
ARHGEF28-203ENST00000426542 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
ARHGEF28-203ENST00000426542 USH2AO75445 5202 aa4.04□□□□□ -1.76
ARHGEF28-203ENST00000426542 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
ARHGEF28-203ENST00000426542 KRTAP4-6Q9BYQ5 205 aa3.98□□□□□ -1.77
ARHGEF28-203ENST00000426542 KRTAP5-9P26371 169 aa3.91□□□□□ -1.78
ARHGEF28-203ENST00000426542 KRTAP20-2Q3LI61 65 aa3.9□□□□□ -1.79
ARHGEF28-203ENST00000426542 NEBP20929 6669 aa3.89□□□□□ -1.79
ARHGEF28-203ENST00000426542 KMT2DO14686 5537 aa3.89□□□□□ -1.79
ARHGEF28-203ENST00000426542 DSTQ03001 7570 aaKnown RBP3.88□□□□□ -1.79
ARHGEF28-203ENST00000426542 MACF1Q9UPN3 7388 aaKnown RBP3.8□□□□□ -1.8
ARHGEF28-203ENST00000426542 KRTAP4-4Q9BYR3 166 aa3.79□□□□□ -1.8
ARHGEF28-203ENST00000426542 SSPOA2VEC9 5147 aa3.76□□□□□ -1.81
ARHGEF28-203ENST00000426542 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
ARHGEF28-203ENST00000426542 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
ARHGEF28-203ENST00000426542 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
ARHGEF28-203ENST00000426542 KRTAP5-5Q701N2 237 aaPredicted RBP3.51□□□□□ -1.85
ARHGEF28-203ENST00000426542 GPR98Q8WXG9 6306 aa3.47□□□□□ -1.85
ARHGEF28-203ENST00000426542 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.86
ARHGEF28-203ENST00000426542 MUC12Q9UKN1 5478 aa3.45□□□□□ -1.86
ARHGEF28-203ENST00000426542 MDN1Q9NU22 5596 aa3.44□□□□□ -1.86
ARHGEF28-203ENST00000426542 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
ARHGEF28-203ENST00000426542 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
ARHGEF28-203ENST00000426542 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
ARHGEF28-203ENST00000426542 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
ARHGEF28-203ENST00000426542 AHNAK2Q8IVF2 5795 aa2.79□□□□□ -1.96
ARHGEF28-203ENST00000426542 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
ARHGEF28-203ENST00000426542 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
ARHGEF28-203ENST00000426542 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
ARHGEF28-203ENST00000426542 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
ARHGEF28-203ENST00000426542 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
ARHGEF28-203ENST00000426542 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.01
ARHGEF28-203ENST00000426542 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
ARHGEF28-203ENST00000426542 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
ARHGEF28-203ENST00000426542 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
ARHGEF28-203ENST00000426542 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
ARHGEF28-203ENST00000426542 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
ARHGEF28-203ENST00000426542 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 876.1 ms