RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 KMT2CQ8NEZ4 4911 aaKnown RBP3.15□□□□□ -1.91
SP1-202ENST00000426431 ABCA13Q86UQ4 5058 aa3.11□□□□□ -1.91
SP1-202ENST00000426431 KRTAP6-3Q3LI67 103 aa3.11□□□□□ -1.91
SP1-202ENST00000426431 LPAP08519 4548 aa3.09□□□□□ -1.91
SP1-202ENST00000426431 MT1AP04731 61 aa3.09□□□□□ -1.92
SP1-202ENST00000426431 KRTAP19-7Q3SYF9 63 aa3.08□□□□□ -1.92
SP1-202ENST00000426431 KRTAP4-7Q9BYR0 210 aa3.08□□□□□ -1.92
SP1-202ENST00000426431 MT4P47944 62 aa3.04□□□□□ -1.92
SP1-202ENST00000426431 KRTAP20-1Q3LI63 56 aa3.04□□□□□ -1.92
SP1-202ENST00000426431 RNF213Q63HN8 5207 aa3.04□□□□□ -1.92
SP1-202ENST00000426431 KRTAP9-7A8MTY7 169 aa3□□□□□ -1.93
SP1-202ENST00000426431 KRTAP2-3P0C7H8 128 aa3□□□□□ -1.93
SP1-202ENST00000426431 KRTAP2-4Q9BYR9 128 aa3□□□□□ -1.93
SP1-202ENST00000426431 FAT4Q6V0I7 4981 aa2.98□□□□□ -1.93
SP1-202ENST00000426431 LCE4AQ5TA78 99 aa2.98□□□□□ -1.93
SP1-202ENST00000426431 UBR4Q5T4S7 5183 aa2.92□□□□□ -1.94
SP1-202ENST00000426431 KRTAP2-1Q9BYU5 128 aa2.91□□□□□ -1.94
SP1-202ENST00000426431 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.91□□□□□ -1.94
SP1-202ENST00000426431 LOC100996750A0A140TA64 210 aa2.91□□□□□ -1.94
SP1-202ENST00000426431 LCE5AQ5TCM9 118 aa2.91□□□□□ -1.94
SP1-202ENST00000426431 KRTAP4-3Q9BYR4 195 aa2.91□□□□□ -1.94
SP1-202ENST00000426431 HMCN2Q8NDA2 5059 aa2.89□□□□□ -1.95
SP1-202ENST00000426431 KRTAP2-2Q9BYT5 123 aa2.89□□□□□ -1.95
SP1-202ENST00000426431 LCE1DQ5T752 114 aa2.89□□□□□ -1.95
SP1-202ENST00000426431 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
SP1-202ENST00000426431 PRM1P04553 51 aa2.85□□□□□ -1.95
SP1-202ENST00000426431 KRTAP9-4Q9BYQ2 154 aa2.82□□□□□ -1.96
SP1-202ENST00000426431 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
SP1-202ENST00000426431 SYNE2Q8WXH0 6885 aaKnown RBP2.75□□□□□ -1.97
SP1-202ENST00000426431 KRTAP6-1Q3LI64 71 aa2.74□□□□□ -1.97
SP1-202ENST00000426431 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
SP1-202ENST00000426431 MUC2Q02817 5179 aa2.68□□□□□ -1.98
SP1-202ENST00000426431 KRTAP5-9P26371 169 aa2.67□□□□□ -1.98
SP1-202ENST00000426431 FSIP2Q5CZC0 6907 aa2.64□□□□□ -1.99
SP1-202ENST00000426431 KRTAP9-6A8MVA2 160 aa2.64□□□□□ -1.99
SP1-202ENST00000426431 KRTAP4-9Q9BYQ8 210 aa2.62□□□□□ -1.99
SP1-202ENST00000426431 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
SP1-202ENST00000426431 KRTAP9-9Q9BYP9 154 aa2.5□□□□□ -2.01
SP1-202ENST00000426431 NEBP20929 6669 aa2.47□□□□□ -2.01
SP1-202ENST00000426431 USH2AO75445 5202 aa2.46□□□□□ -2.02
SP1-202ENST00000426431 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
SP1-202ENST00000426431 LCE1EQ5T753 118 aa2.45□□□□□ -2.02
SP1-202ENST00000426431 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
SP1-202ENST00000426431 SSPOA2VEC9 5147 aa2.43□□□□□ -2.02
SP1-202ENST00000426431 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
SP1-202ENST00000426431 KRTAP5-4Q6L8H1 288 aa2.34□□□□□ -2.04
SP1-202ENST00000426431 FCGBPQ9Y6R7 5405 aaPredicted RBP2.3□□□□□ -2.04
SP1-202ENST00000426431 KRTAP4-6Q9BYQ5 205 aa2.28□□□□□ -2.04
SP1-202ENST00000426431 MACF1Q9UPN3 7388 aaKnown RBP2.27□□□□□ -2.05
SP1-202ENST00000426431 DSTQ03001 7570 aaKnown RBP2.24□□□□□ -2.05
SP1-202ENST00000426431 KMT2DO14686 5537 aa2.21□□□□□ -2.06
SP1-202ENST00000426431 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
SP1-202ENST00000426431 MDN1Q9NU22 5596 aa2.17□□□□□ -2.06
SP1-202ENST00000426431 KRTAP4-11Q9BYQ6 195 aa2.16□□□□□ -2.06
SP1-202ENST00000426431 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
SP1-202ENST00000426431 MUC12Q9UKN1 5478 aa2.06□□□□□ -2.08
SP1-202ENST00000426431 KRTAP5-3Q6L8H2 238 aa2.04□□□□□ -2.08
SP1-202ENST00000426431 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
SP1-202ENST00000426431 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
SP1-202ENST00000426431 KRTAP4-12Q9BQ66 201 aa1.89□□□□□ -2.11
SP1-202ENST00000426431 KRTAP4-2Q9BYR5 136 aa1.89□□□□□ -2.11
SP1-202ENST00000426431 MUC5ACP98088 5654 aa1.88□□□□□ -2.11
SP1-202ENST00000426431 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
SP1-202ENST00000426431 KRTAP5-2Q701N4 177 aa1.85□□□□□ -2.11
SP1-202ENST00000426431 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
SP1-202ENST00000426431 KRTAP5-8O75690 187 aa1.76□□□□□ -2.13
SP1-202ENST00000426431 KRTAP5-10Q6L8G5 202 aa1.67□□□□□ -2.14
SP1-202ENST00000426431 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
SP1-202ENST00000426431 MUC5BQ9HC84 5762 aaPredicted RBP1.63□□□□□ -2.15
SP1-202ENST00000426431 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
SP1-202ENST00000426431 KRTAP5-1Q6L8H4 278 aa1.55□□□□□ -2.16
SP1-202ENST00000426431 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
SP1-202ENST00000426431 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.54□□□□□ -2.16
SP1-202ENST00000426431 KRTAP5-7Q6L8G8 165 aa1.47□□□□□ -2.17
SP1-202ENST00000426431 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
SP1-202ENST00000426431 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
SP1-202ENST00000426431 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 212 ms