RNA–Protein interactions for RNA: ENST00000425967.7

FGFR1-211, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 5,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-211ENST00000425967 MT4P47944 62 aa3.93□□□□□ -1.78
FGFR1-211ENST00000425967 LCE2AQ5TA79 106 aaPredicted RBP3.93□□□□□ -1.78
FGFR1-211ENST00000425967 KRTAP19-6Q3LI70 58 aa3.91□□□□□ -1.78
FGFR1-211ENST00000425967 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
FGFR1-211ENST00000425967 KRTAP9-2Q9BYQ4 174 aa3.86□□□□□ -1.79
FGFR1-211ENST00000425967 LOC100996750A0A140TA64 210 aa3.84□□□□□ -1.8
FGFR1-211ENST00000425967 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
FGFR1-211ENST00000425967 PRM1P04553 51 aa3.8□□□□□ -1.8
FGFR1-211ENST00000425967 KRTAP4-3Q9BYR4 195 aa3.8□□□□□ -1.8
FGFR1-211ENST00000425967 LCE1DQ5T752 114 aa3.79□□□□□ -1.8
FGFR1-211ENST00000425967 RNF213Q63HN8 5207 aa3.76□□□□□ -1.81
FGFR1-211ENST00000425967 UBR4Q5T4S7 5183 aa3.76□□□□□ -1.81
FGFR1-211ENST00000425967 FSIP2Q5CZC0 6907 aa3.75□□□□□ -1.81
FGFR1-211ENST00000425967 FAT4Q6V0I7 4981 aa3.7□□□□□ -1.82
FGFR1-211ENST00000425967 MT1AP04731 61 aa3.7□□□□□ -1.82
FGFR1-211ENST00000425967 KRTAP19-7Q3SYF9 63 aa3.7□□□□□ -1.82
FGFR1-211ENST00000425967 KRTAP9-6A0A140TA67 174 aa3.68□□□□□ -1.82
FGFR1-211ENST00000425967 KRTAP20-1Q3LI63 56 aa3.6□□□□□ -1.83
FGFR1-211ENST00000425967 MUC2Q02817 5179 aa3.6□□□□□ -1.83
FGFR1-211ENST00000425967 KRTAP4-9Q9BYQ8 210 aa3.59□□□□□ -1.83
FGFR1-211ENST00000425967 LCE5AQ5TCM9 118 aa3.59□□□□□ -1.83
FGFR1-211ENST00000425967 KRTAP2-3P0C7H8 128 aa3.58□□□□□ -1.84
FGFR1-211ENST00000425967 KRTAP2-4Q9BYR9 128 aa3.58□□□□□ -1.84
FGFR1-211ENST00000425967 KRTAP2-1Q9BYU5 128 aa3.58□□□□□ -1.84
FGFR1-211ENST00000425967 LCE1AQ5T7P2 110 aa3.53□□□□□ -1.84
FGFR1-211ENST00000425967 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
FGFR1-211ENST00000425967 SYNE2Q8WXH0 6885 aaKnown RBP3.5□□□□□ -1.85
FGFR1-211ENST00000425967 KRTAP9-7A8MTY7 169 aa3.49□□□□□ -1.85
FGFR1-211ENST00000425967 KRTAP6-3Q3LI67 103 aa3.49□□□□□ -1.85
FGFR1-211ENST00000425967 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
FGFR1-211ENST00000425967 LCE4AQ5TA78 99 aa3.42□□□□□ -1.86
FGFR1-211ENST00000425967 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
FGFR1-211ENST00000425967 KRTAP9-4Q9BYQ2 154 aa3.4□□□□□ -1.87
FGFR1-211ENST00000425967 KRTAP6-1Q3LI64 71 aa3.4□□□□□ -1.87
FGFR1-211ENST00000425967 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.34□□□□□ -1.87
FGFR1-211ENST00000425967 KRTAP2-2Q9BYT5 123 aa3.34□□□□□ -1.87
FGFR1-211ENST00000425967 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
FGFR1-211ENST00000425967 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
FGFR1-211ENST00000425967 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
FGFR1-211ENST00000425967 FCGBPQ9Y6R7 5405 aaPredicted RBP3.27□□□□□ -1.89
FGFR1-211ENST00000425967 USH2AO75445 5202 aa3.24□□□□□ -1.89
FGFR1-211ENST00000425967 KRTAP5-9P26371 169 aa3.18□□□□□ -1.9
FGFR1-211ENST00000425967 DSTQ03001 7570 aaKnown RBP3.17□□□□□ -1.9
FGFR1-211ENST00000425967 SSPOA2VEC9 5147 aa3.15□□□□□ -1.91
FGFR1-211ENST00000425967 KMT2DO14686 5537 aa3.06□□□□□ -1.92
FGFR1-211ENST00000425967 KRTAP9-9Q9BYP9 154 aa3.04□□□□□ -1.92
FGFR1-211ENST00000425967 MACF1Q9UPN3 7388 aaKnown RBP3.03□□□□□ -1.92
FGFR1-211ENST00000425967 NEBP20929 6669 aa2.9□□□□□ -1.94
FGFR1-211ENST00000425967 MUC12Q9UKN1 5478 aa2.85□□□□□ -1.95
FGFR1-211ENST00000425967 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
FGFR1-211ENST00000425967 KRTAP4-6Q9BYQ5 205 aa2.79□□□□□ -1.96
FGFR1-211ENST00000425967 KRTAP4-11Q9BYQ6 195 aa2.78□□□□□ -1.96
FGFR1-211ENST00000425967 KRTAP20-2Q3LI61 65 aa2.78□□□□□ -1.96
FGFR1-211ENST00000425967 MDN1Q9NU22 5596 aa2.78□□□□□ -1.97
FGFR1-211ENST00000425967 GPR98Q8WXG9 6306 aa2.75□□□□□ -1.97
FGFR1-211ENST00000425967 KRTAP5-5Q701N2 237 aaPredicted RBP2.69□□□□□ -1.98
FGFR1-211ENST00000425967 KRTAP5-4Q6L8H1 288 aa2.66□□□□□ -1.98
FGFR1-211ENST00000425967 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
FGFR1-211ENST00000425967 KRTAP4-12Q9BQ66 201 aa2.57□□□□□ -2
FGFR1-211ENST00000425967 KRTAP4-2Q9BYR5 136 aa2.57□□□□□ -2
FGFR1-211ENST00000425967 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
FGFR1-211ENST00000425967 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
FGFR1-211ENST00000425967 KRTAP5-3Q6L8H2 238 aa2.32□□□□□ -2.04
FGFR1-211ENST00000425967 AHNAK2Q8IVF2 5795 aa2.26□□□□□ -2.05
FGFR1-211ENST00000425967 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
FGFR1-211ENST00000425967 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
FGFR1-211ENST00000425967 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
FGFR1-211ENST00000425967 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
FGFR1-211ENST00000425967 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.98□□□□□ -2.09
FGFR1-211ENST00000425967 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
FGFR1-211ENST00000425967 KRTAP5-1Q6L8H4 278 aa1.97□□□□□ -2.09
FGFR1-211ENST00000425967 MUC5BQ9HC84 5762 aaPredicted RBP1.93□□□□□ -2.1
FGFR1-211ENST00000425967 AHNAKQ09666 5890 aaKnown RBP1.85□□□□□ -2.11
FGFR1-211ENST00000425967 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.11
FGFR1-211ENST00000425967 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
FGFR1-211ENST00000425967 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
FGFR1-211ENST00000425967 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 150 ms