RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 KRTAP9-2Q9BYQ4 174 aa3.65□□□□□ -1.83
CLCN4-203ENST00000421085 MUC17Q685J3 4493 aa3.65□□□□□ -1.83
CLCN4-203ENST00000421085 KRTAP2-3P0C7H8 128 aa3.62□□□□□ -1.83
CLCN4-203ENST00000421085 KRTAP2-4Q9BYR9 128 aa3.62□□□□□ -1.83
CLCN4-203ENST00000421085 KRTAP2-1Q9BYU5 128 aa3.62□□□□□ -1.83
CLCN4-203ENST00000421085 ABCA13Q86UQ4 5058 aa3.62□□□□□ -1.83
CLCN4-203ENST00000421085 KRTAP4-9Q9BYQ8 210 aa3.61□□□□□ -1.83
CLCN4-203ENST00000421085 MT4P47944 62 aa3.6□□□□□ -1.83
CLCN4-203ENST00000421085 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.83
CLCN4-203ENST00000421085 PCLOQ9Y6V0 5065 aa3.58□□□□□ -1.84
CLCN4-203ENST00000421085 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
CLCN4-203ENST00000421085 KRTAP19-7Q3SYF9 63 aa3.56□□□□□ -1.84
CLCN4-203ENST00000421085 KRTAP19-6Q3LI70 58 aa3.52□□□□□ -1.85
CLCN4-203ENST00000421085 MT1AP04731 61 aa3.51□□□□□ -1.85
CLCN4-203ENST00000421085 SYNE1Q8NF91 8797 aaKnown RBP3.45□□□□□ -1.86
CLCN4-203ENST00000421085 KRTAP9-7A8MTY7 169 aa3.44□□□□□ -1.86
CLCN4-203ENST00000421085 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
CLCN4-203ENST00000421085 KRTAP20-1Q3LI63 56 aa3.41□□□□□ -1.86
CLCN4-203ENST00000421085 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.87
CLCN4-203ENST00000421085 HMCN2Q8NDA2 5059 aa3.38□□□□□ -1.87
CLCN4-203ENST00000421085 FSIP2Q5CZC0 6907 aa3.36□□□□□ -1.87
CLCN4-203ENST00000421085 LCE2AQ5TA79 106 aaPredicted RBP3.35□□□□□ -1.87
CLCN4-203ENST00000421085 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
CLCN4-203ENST00000421085 RNF213Q63HN8 5207 aa3.33□□□□□ -1.88
CLCN4-203ENST00000421085 LCE5AQ5TCM9 118 aa3.31□□□□□ -1.88
CLCN4-203ENST00000421085 UBR4Q5T4S7 5183 aa3.29□□□□□ -1.88
CLCN4-203ENST00000421085 FAT4Q6V0I7 4981 aa3.28□□□□□ -1.88
CLCN4-203ENST00000421085 SYNE2Q8WXH0 6885 aaKnown RBP3.28□□□□□ -1.88
CLCN4-203ENST00000421085 KRTAP9-4Q9BYQ2 154 aa3.24□□□□□ -1.89
CLCN4-203ENST00000421085 MUC2Q02817 5179 aa3.21□□□□□ -1.9
CLCN4-203ENST00000421085 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
CLCN4-203ENST00000421085 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
CLCN4-203ENST00000421085 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
CLCN4-203ENST00000421085 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
CLCN4-203ENST00000421085 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
CLCN4-203ENST00000421085 KRTAP2-2Q9BYT5 123 aa3.05□□□□□ -1.92
CLCN4-203ENST00000421085 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.03□□□□□ -1.92
CLCN4-203ENST00000421085 KRTAP6-3Q3LI67 103 aa2.98□□□□□ -1.93
CLCN4-203ENST00000421085 LCE4AQ5TA78 99 aa2.98□□□□□ -1.93
CLCN4-203ENST00000421085 FCGBPQ9Y6R7 5405 aaPredicted RBP2.93□□□□□ -1.94
CLCN4-203ENST00000421085 KRTAP4-11Q9BYQ6 195 aa2.87□□□□□ -1.95
CLCN4-203ENST00000421085 USH2AO75445 5202 aa2.84□□□□□ -1.95
CLCN4-203ENST00000421085 KMT2DO14686 5537 aa2.8□□□□□ -1.96
CLCN4-203ENST00000421085 DSTQ03001 7570 aaKnown RBP2.76□□□□□ -1.97
CLCN4-203ENST00000421085 SSPOA2VEC9 5147 aa2.65□□□□□ -1.99
CLCN4-203ENST00000421085 KRTAP5-9P26371 169 aa2.65□□□□□ -1.99
CLCN4-203ENST00000421085 KRTAP9-9Q9BYP9 154 aa2.61□□□□□ -1.99
CLCN4-203ENST00000421085 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
CLCN4-203ENST00000421085 KRTAP4-6Q9BYQ5 205 aa2.6□□□□□ -1.99
CLCN4-203ENST00000421085 KRTAP20-2Q3LI61 65 aa2.55□□□□□ -2
CLCN4-203ENST00000421085 MACF1Q9UPN3 7388 aaKnown RBP2.55□□□□□ -2
CLCN4-203ENST00000421085 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
CLCN4-203ENST00000421085 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
CLCN4-203ENST00000421085 GPR98Q8WXG9 6306 aa2.51□□□□□ -2.01
CLCN4-203ENST00000421085 MUC12Q9UKN1 5478 aa2.46□□□□□ -2.01
CLCN4-203ENST00000421085 NEBP20929 6669 aa2.45□□□□□ -2.02
CLCN4-203ENST00000421085 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
CLCN4-203ENST00000421085 KRTAP4-2Q9BYR5 136 aa2.42□□□□□ -2.02
CLCN4-203ENST00000421085 KRTAP5-4Q6L8H1 288 aa2.3□□□□□ -2.04
CLCN4-203ENST00000421085 MDN1Q9NU22 5596 aa2.25□□□□□ -2.05
CLCN4-203ENST00000421085 MUC5ACP98088 5654 aa2.05□□□□□ -2.08
CLCN4-203ENST00000421085 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
CLCN4-203ENST00000421085 KRTAP5-3Q6L8H2 238 aa2□□□□□ -2.09
CLCN4-203ENST00000421085 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
CLCN4-203ENST00000421085 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.11
CLCN4-203ENST00000421085 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
CLCN4-203ENST00000421085 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
CLCN4-203ENST00000421085 KRTAP5-1Q6L8H4 278 aa1.74□□□□□ -2.13
CLCN4-203ENST00000421085 AHNAK2Q8IVF2 5795 aa1.68□□□□□ -2.14
CLCN4-203ENST00000421085 MUC5BQ9HC84 5762 aaPredicted RBP1.67□□□□□ -2.14
CLCN4-203ENST00000421085 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
CLCN4-203ENST00000421085 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
CLCN4-203ENST00000421085 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
CLCN4-203ENST00000421085 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
CLCN4-203ENST00000421085 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.56□□□□□ -2.16
CLCN4-203ENST00000421085 KRTAP5-7Q6L8G8 165 aa1.55□□□□□ -2.16
CLCN4-203ENST00000421085 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 80.3 ms