RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 KRTAP9-6A0A140TA67 174 aa3.39□□□□□ -1.87
PTCH1-205ENST00000418258 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
PTCH1-205ENST00000418258 HERC1Q15751 4861 aa3.36□□□□□ -1.87
PTCH1-205ENST00000418258 PCLOQ9Y6V0 5065 aa3.35□□□□□ -1.87
PTCH1-205ENST00000418258 KRTAP19-2Q3LHN2 52 aa3.34□□□□□ -1.88
PTCH1-205ENST00000418258 KRTAP20-1Q3LI63 56 aa3.34□□□□□ -1.88
PTCH1-205ENST00000418258 LCE5AQ5TCM9 118 aa3.33□□□□□ -1.88
PTCH1-205ENST00000418258 EPPK1P58107 5090 aaKnown RBP3.31□□□□□ -1.88
PTCH1-205ENST00000418258 SYNE2Q8WXH0 6885 aaKnown RBP3.3□□□□□ -1.88
PTCH1-205ENST00000418258 HERC2O95714 4834 aa3.29□□□□□ -1.88
PTCH1-205ENST00000418258 MUC17Q685J3 4493 aa3.28□□□□□ -1.88
PTCH1-205ENST00000418258 UBR4Q5T4S7 5183 aa3.26□□□□□ -1.89
PTCH1-205ENST00000418258 HMCN2Q8NDA2 5059 aa3.25□□□□□ -1.89
PTCH1-205ENST00000418258 KRTAP9-7A8MTY7 169 aa3.22□□□□□ -1.89
PTCH1-205ENST00000418258 RNF213Q63HN8 5207 aa3.2□□□□□ -1.9
PTCH1-205ENST00000418258 KRTAP4-9Q9BYQ8 210 aa3.2□□□□□ -1.9
PTCH1-205ENST00000418258 MT1AP04731 61 aa3.18□□□□□ -1.9
PTCH1-205ENST00000418258 KRTAP2-3P0C7H8 128 aa3.17□□□□□ -1.9
PTCH1-205ENST00000418258 KRTAP2-4Q9BYR9 128 aa3.17□□□□□ -1.9
PTCH1-205ENST00000418258 KRTAP2-1Q9BYU5 128 aa3.17□□□□□ -1.9
PTCH1-205ENST00000418258 LCE2AQ5TA79 106 aaPredicted RBP3.14□□□□□ -1.91
PTCH1-205ENST00000418258 KRTAP19-7Q3SYF9 63 aa3.13□□□□□ -1.91
PTCH1-205ENST00000418258 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
PTCH1-205ENST00000418258 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
PTCH1-205ENST00000418258 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
PTCH1-205ENST00000418258 LCE1AQ5T7P2 110 aa3.11□□□□□ -1.91
PTCH1-205ENST00000418258 KRTAP6-2Q3LI66 62 aa3.08□□□□□ -1.92
PTCH1-205ENST00000418258 KRTAP6-3Q3LI67 103 aa3.07□□□□□ -1.92
PTCH1-205ENST00000418258 LCE4AQ5TA78 99 aa3.05□□□□□ -1.92
PTCH1-205ENST00000418258 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.03□□□□□ -1.92
PTCH1-205ENST00000418258 KRTAP6-1Q3LI64 71 aa3.01□□□□□ -1.93
PTCH1-205ENST00000418258 FSIP2Q5CZC0 6907 aa3□□□□□ -1.93
PTCH1-205ENST00000418258 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
PTCH1-205ENST00000418258 KRTAP9-4Q9BYQ2 154 aa2.99□□□□□ -1.93
PTCH1-205ENST00000418258 USH2AO75445 5202 aa2.94□□□□□ -1.94
PTCH1-205ENST00000418258 FAT4Q6V0I7 4981 aa2.88□□□□□ -1.95
PTCH1-205ENST00000418258 KRTAP9-9Q9BYP9 154 aa2.84□□□□□ -1.96
PTCH1-205ENST00000418258 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
PTCH1-205ENST00000418258 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
PTCH1-205ENST00000418258 MUC2Q02817 5179 aa2.77□□□□□ -1.97
PTCH1-205ENST00000418258 SSPOA2VEC9 5147 aa2.73□□□□□ -1.97
PTCH1-205ENST00000418258 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
PTCH1-205ENST00000418258 KRTAP4-6Q9BYQ5 205 aa2.55□□□□□ -2
PTCH1-205ENST00000418258 KRTAP4-11Q9BYQ6 195 aa2.53□□□□□ -2
PTCH1-205ENST00000418258 KRTAP20-2Q3LI61 65 aa2.5□□□□□ -2.01
PTCH1-205ENST00000418258 KMT2DO14686 5537 aa2.49□□□□□ -2.01
PTCH1-205ENST00000418258 DSTQ03001 7570 aaKnown RBP2.49□□□□□ -2.01
PTCH1-205ENST00000418258 KRTAP5-9P26371 169 aa2.46□□□□□ -2.02
PTCH1-205ENST00000418258 MDN1Q9NU22 5596 aa2.44□□□□□ -2.02
PTCH1-205ENST00000418258 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
PTCH1-205ENST00000418258 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.03
PTCH1-205ENST00000418258 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.03
PTCH1-205ENST00000418258 FCGBPQ9Y6R7 5405 aaPredicted RBP2.38□□□□□ -2.03
PTCH1-205ENST00000418258 NEBP20929 6669 aa2.37□□□□□ -2.03
PTCH1-205ENST00000418258 MACF1Q9UPN3 7388 aaKnown RBP2.36□□□□□ -2.03
PTCH1-205ENST00000418258 KRTAP5-4Q6L8H1 288 aa2.28□□□□□ -2.04
PTCH1-205ENST00000418258 MUC12Q9UKN1 5478 aa2.13□□□□□ -2.07
PTCH1-205ENST00000418258 GPR98Q8WXG9 6306 aa2.12□□□□□ -2.07
PTCH1-205ENST00000418258 KRTAP5-5Q701N2 237 aaPredicted RBP2.05□□□□□ -2.08
PTCH1-205ENST00000418258 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.08
PTCH1-205ENST00000418258 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
PTCH1-205ENST00000418258 KRTAP5-3Q6L8H2 238 aa1.99□□□□□ -2.09
PTCH1-205ENST00000418258 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
PTCH1-205ENST00000418258 AHNAK2Q8IVF2 5795 aa1.86□□□□□ -2.11
PTCH1-205ENST00000418258 KRTAP5-8O75690 187 aa1.84□□□□□ -2.11
PTCH1-205ENST00000418258 MUC5ACP98088 5654 aa1.78□□□□□ -2.13
PTCH1-205ENST00000418258 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
PTCH1-205ENST00000418258 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
PTCH1-205ENST00000418258 KRTAP5-2Q701N4 177 aa1.6□□□□□ -2.15
PTCH1-205ENST00000418258 MUC5BQ9HC84 5762 aaPredicted RBP1.57□□□□□ -2.16
PTCH1-205ENST00000418258 KRTAP5-1Q6L8H4 278 aa1.53□□□□□ -2.16
PTCH1-205ENST00000418258 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.17
PTCH1-205ENST00000418258 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
PTCH1-205ENST00000418258 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
PTCH1-205ENST00000418258 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.24□□□□□ -2.21
PTCH1-205ENST00000418258 KRTAP5-7Q6L8G8 165 aa1.22□□□□□ -2.21
PTCH1-205ENST00000418258 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 81 ms