RNA–Protein interactions for RNA: ENST00000409299.7

PXMP4-203, Transcript of peroxisomal membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PXMP4, Length 5,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-203ENST00000409299 MT4P47944 62 aa3.89□□□□□ -1.79
PXMP4-203ENST00000409299 FLGP20930 4061 aaPredicted RBP3.89□□□□□ -1.79
PXMP4-203ENST00000409299 MT1MQ8N339 61 aa3.83□□□□□ -1.8
PXMP4-203ENST00000409299 UBR4Q5T4S7 5183 aa3.83□□□□□ -1.8
PXMP4-203ENST00000409299 FAT4Q6V0I7 4981 aa3.82□□□□□ -1.8
PXMP4-203ENST00000409299 FSIP2Q5CZC0 6907 aa3.82□□□□□ -1.8
PXMP4-203ENST00000409299 RNF213Q63HN8 5207 aa3.8□□□□□ -1.8
PXMP4-203ENST00000409299 MT3P25713 68 aa3.76□□□□□ -1.81
PXMP4-203ENST00000409299 KRTAP9-7A8MTY7 169 aa3.74□□□□□ -1.81
PXMP4-203ENST00000409299 KRTAP4-3Q9BYR4 195 aa3.72□□□□□ -1.81
PXMP4-203ENST00000409299 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
PXMP4-203ENST00000409299 LOC100996750A0A140TA64 210 aa3.7□□□□□ -1.82
PXMP4-203ENST00000409299 PRM1P04553 51 aa3.66□□□□□ -1.82
PXMP4-203ENST00000409299 HMCN2Q8NDA2 5059 aa3.64□□□□□ -1.83
PXMP4-203ENST00000409299 SYNE2Q8WXH0 6885 aaKnown RBP3.63□□□□□ -1.83
PXMP4-203ENST00000409299 KRTAP6-3Q3LI67 103 aa3.63□□□□□ -1.83
PXMP4-203ENST00000409299 KRTAP2-3P0C7H8 128 aa3.61□□□□□ -1.83
PXMP4-203ENST00000409299 KRTAP2-4Q9BYR9 128 aa3.61□□□□□ -1.83
PXMP4-203ENST00000409299 KRTAP2-1Q9BYU5 128 aa3.61□□□□□ -1.83
PXMP4-203ENST00000409299 KRTAP19-7Q3SYF9 63 aa3.61□□□□□ -1.83
PXMP4-203ENST00000409299 MT1AP04731 61 aa3.59□□□□□ -1.83
PXMP4-203ENST00000409299 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.59□□□□□ -1.83
PXMP4-203ENST00000409299 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.83
PXMP4-203ENST00000409299 LCE1DQ5T752 114 aa3.59□□□□□ -1.84
PXMP4-203ENST00000409299 MUC2Q02817 5179 aa3.59□□□□□ -1.84
PXMP4-203ENST00000409299 LCE1AQ5T7P2 110 aa3.51□□□□□ -1.85
PXMP4-203ENST00000409299 SYNE1Q8NF91 8797 aaKnown RBP3.47□□□□□ -1.85
PXMP4-203ENST00000409299 KRTAP4-9Q9BYQ8 210 aa3.43□□□□□ -1.86
PXMP4-203ENST00000409299 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
PXMP4-203ENST00000409299 LCE5AQ5TCM9 118 aa3.4□□□□□ -1.86
PXMP4-203ENST00000409299 LCE4AQ5TA78 99 aa3.38□□□□□ -1.87
PXMP4-203ENST00000409299 KRTAP6-1Q3LI64 71 aa3.31□□□□□ -1.88
PXMP4-203ENST00000409299 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
PXMP4-203ENST00000409299 KRTAP9-4Q9BYQ2 154 aa3.3□□□□□ -1.88
PXMP4-203ENST00000409299 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
PXMP4-203ENST00000409299 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
PXMP4-203ENST00000409299 USH2AO75445 5202 aa3.17□□□□□ -1.9
PXMP4-203ENST00000409299 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
PXMP4-203ENST00000409299 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
PXMP4-203ENST00000409299 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
PXMP4-203ENST00000409299 NEBP20929 6669 aa3.08□□□□□ -1.92
PXMP4-203ENST00000409299 MACF1Q9UPN3 7388 aaKnown RBP3.07□□□□□ -1.92
PXMP4-203ENST00000409299 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
PXMP4-203ENST00000409299 FCGBPQ9Y6R7 5405 aaPredicted RBP3.01□□□□□ -1.93
PXMP4-203ENST00000409299 DSTQ03001 7570 aaKnown RBP2.99□□□□□ -1.93
PXMP4-203ENST00000409299 SSPOA2VEC9 5147 aa2.99□□□□□ -1.93
PXMP4-203ENST00000409299 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
PXMP4-203ENST00000409299 KMT2DO14686 5537 aa2.95□□□□□ -1.94
PXMP4-203ENST00000409299 KRTAP4-6Q9BYQ5 205 aa2.9□□□□□ -1.94
PXMP4-203ENST00000409299 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.96
PXMP4-203ENST00000409299 MDN1Q9NU22 5596 aa2.76□□□□□ -1.97
PXMP4-203ENST00000409299 MUC12Q9UKN1 5478 aa2.75□□□□□ -1.97
PXMP4-203ENST00000409299 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
PXMP4-203ENST00000409299 KRTAP5-4Q6L8H1 288 aa2.66□□□□□ -1.98
PXMP4-203ENST00000409299 KRTAP4-11Q9BYQ6 195 aa2.64□□□□□ -1.99
PXMP4-203ENST00000409299 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -1.99
PXMP4-203ENST00000409299 KRTAP4-2Q9BYR5 136 aa2.56□□□□□ -2
PXMP4-203ENST00000409299 KRTAP5-5Q701N2 237 aaPredicted RBP2.51□□□□□ -2.01
PXMP4-203ENST00000409299 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
PXMP4-203ENST00000409299 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
PXMP4-203ENST00000409299 KRTAP5-3Q6L8H2 238 aa2.4□□□□□ -2.03
PXMP4-203ENST00000409299 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
PXMP4-203ENST00000409299 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
PXMP4-203ENST00000409299 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
PXMP4-203ENST00000409299 HMCN1Q96RW7 5635 aa2.18□□□□□ -2.06
PXMP4-203ENST00000409299 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.09
PXMP4-203ENST00000409299 KRTAP5-10Q6L8G5 202 aa2.01□□□□□ -2.09
PXMP4-203ENST00000409299 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
PXMP4-203ENST00000409299 MUC5BQ9HC84 5762 aaPredicted RBP1.9□□□□□ -2.11
PXMP4-203ENST00000409299 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
PXMP4-203ENST00000409299 KRTAP5-1Q6L8H4 278 aa1.81□□□□□ -2.12
PXMP4-203ENST00000409299 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
PXMP4-203ENST00000409299 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
PXMP4-203ENST00000409299 KRTAP5-7Q6L8G8 165 aa1.68□□□□□ -2.14
PXMP4-203ENST00000409299 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
PXMP4-203ENST00000409299 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.14
PXMP4-203ENST00000409299 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 57.2 ms