RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
SHANK2-203ENST00000409161 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
SHANK2-203ENST00000409161 LCE1AQ5T7P2 110 aa3.24□□□□□ -1.89
SHANK2-203ENST00000409161 LPAP08519 4548 aa3.22□□□□□ -1.89
SHANK2-203ENST00000409161 KRTAP4-9Q9BYQ8 210 aa3.21□□□□□ -1.9
SHANK2-203ENST00000409161 KRTAP9-4Q9BYQ2 154 aa3.17□□□□□ -1.9
SHANK2-203ENST00000409161 KRTAP9-2Q9BYQ4 174 aa3.17□□□□□ -1.9
SHANK2-203ENST00000409161 LCE4AQ5TA78 99 aa3.17□□□□□ -1.9
SHANK2-203ENST00000409161 KMT2CQ8NEZ4 4911 aaKnown RBP3.17□□□□□ -1.9
SHANK2-203ENST00000409161 KRTAP20-1Q3LI63 56 aa3.12□□□□□ -1.91
SHANK2-203ENST00000409161 KRTAP6-1Q3LI64 71 aa3.11□□□□□ -1.91
SHANK2-203ENST00000409161 PCLOQ9Y6V0 5065 aa3.1□□□□□ -1.91
SHANK2-203ENST00000409161 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
SHANK2-203ENST00000409161 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
SHANK2-203ENST00000409161 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
SHANK2-203ENST00000409161 HERC2O95714 4834 aa3.05□□□□□ -1.92
SHANK2-203ENST00000409161 RYR2Q92736 4967 aa3.03□□□□□ -1.92
SHANK2-203ENST00000409161 SYNE2Q8WXH0 6885 aaKnown RBP3.02□□□□□ -1.93
SHANK2-203ENST00000409161 BIRC6Q9NR09 4857 aa3.02□□□□□ -1.93
SHANK2-203ENST00000409161 KRTAP9-6A8MVA2 160 aa3.02□□□□□ -1.93
SHANK2-203ENST00000409161 KRTAP2-2Q9BYT5 123 aa3.01□□□□□ -1.93
SHANK2-203ENST00000409161 KRTAP9-7A8MTY7 169 aa3.01□□□□□ -1.93
SHANK2-203ENST00000409161 KRTAP6-3Q3LI67 103 aa2.98□□□□□ -1.93
SHANK2-203ENST00000409161 LCE2AQ5TA79 106 aaPredicted RBP2.97□□□□□ -1.93
SHANK2-203ENST00000409161 KRTAP9-6A0A140TA67 174 aa2.95□□□□□ -1.94
SHANK2-203ENST00000409161 HERC1Q15751 4861 aa2.9□□□□□ -1.95
SHANK2-203ENST00000409161 KRTAP9-9Q9BYP9 154 aa2.84□□□□□ -1.95
SHANK2-203ENST00000409161 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
SHANK2-203ENST00000409161 HMCN2Q8NDA2 5059 aa2.76□□□□□ -1.97
SHANK2-203ENST00000409161 HYDINQ4G0P3 5121 aa2.73□□□□□ -1.97
SHANK2-203ENST00000409161 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.72□□□□□ -1.97
SHANK2-203ENST00000409161 KIAA1109Q2LD37 5005 aa2.72□□□□□ -1.97
SHANK2-203ENST00000409161 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
SHANK2-203ENST00000409161 EPPK1P58107 5090 aaKnown RBP2.62□□□□□ -1.99
SHANK2-203ENST00000409161 RNF213Q63HN8 5207 aa2.53□□□□□ -2
SHANK2-203ENST00000409161 FSIP2Q5CZC0 6907 aa2.52□□□□□ -2.01
SHANK2-203ENST00000409161 MUC2Q02817 5179 aa2.49□□□□□ -2.01
SHANK2-203ENST00000409161 KRTAP5-9P26371 169 aa2.48□□□□□ -2.01
SHANK2-203ENST00000409161 KRTAP20-2Q3LI61 65 aa2.44□□□□□ -2.02
SHANK2-203ENST00000409161 UBR4Q5T4S7 5183 aa2.42□□□□□ -2.02
SHANK2-203ENST00000409161 KRTAP4-6Q9BYQ5 205 aa2.37□□□□□ -2.03
SHANK2-203ENST00000409161 FAT4Q6V0I7 4981 aa2.37□□□□□ -2.03
SHANK2-203ENST00000409161 KRTAP5-4Q6L8H1 288 aa2.35□□□□□ -2.03
SHANK2-203ENST00000409161 OBSCNQ5VST9 7968 aa2.34□□□□□ -2.04
SHANK2-203ENST00000409161 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
SHANK2-203ENST00000409161 ABCA13Q86UQ4 5058 aa2.33□□□□□ -2.04
SHANK2-203ENST00000409161 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
SHANK2-203ENST00000409161 NEBP20929 6669 aa2.19□□□□□ -2.06
SHANK2-203ENST00000409161 KRTAP4-12Q9BQ66 201 aa2.18□□□□□ -2.06
SHANK2-203ENST00000409161 KRTAP4-2Q9BYR5 136 aa2.18□□□□□ -2.06
SHANK2-203ENST00000409161 KMT2DO14686 5537 aa2.17□□□□□ -2.06
SHANK2-203ENST00000409161 FCGBPQ9Y6R7 5405 aaPredicted RBP2.14□□□□□ -2.07
SHANK2-203ENST00000409161 MDN1Q9NU22 5596 aa2.1□□□□□ -2.07
SHANK2-203ENST00000409161 DSTQ03001 7570 aaKnown RBP2.09□□□□□ -2.08
SHANK2-203ENST00000409161 USH2AO75445 5202 aa2.03□□□□□ -2.08
SHANK2-203ENST00000409161 KRTAP5-3Q6L8H2 238 aa2.02□□□□□ -2.09
SHANK2-203ENST00000409161 MACF1Q9UPN3 7388 aaKnown RBP1.99□□□□□ -2.09
SHANK2-203ENST00000409161 MUC5ACP98088 5654 aa1.95□□□□□ -2.1
SHANK2-203ENST00000409161 GPR98Q8WXG9 6306 aa1.94□□□□□ -2.1
SHANK2-203ENST00000409161 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.1
SHANK2-203ENST00000409161 KRTAP5-10Q6L8G5 202 aa1.89□□□□□ -2.11
SHANK2-203ENST00000409161 SSPOA2VEC9 5147 aa1.88□□□□□ -2.11
SHANK2-203ENST00000409161 MUC12Q9UKN1 5478 aa1.84□□□□□ -2.11
SHANK2-203ENST00000409161 MUC5BQ9HC84 5762 aaPredicted RBP1.76□□□□□ -2.13
SHANK2-203ENST00000409161 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
SHANK2-203ENST00000409161 HMCN1Q96RW7 5635 aa1.7□□□□□ -2.14
SHANK2-203ENST00000409161 KRTAP5-2Q701N4 177 aa1.7□□□□□ -2.14
SHANK2-203ENST00000409161 KRTAP5-11Q6L8G4 156 aa1.69□□□□□ -2.14
SHANK2-203ENST00000409161 KRTAP5-8O75690 187 aa1.67□□□□□ -2.14
SHANK2-203ENST00000409161 KRTAP5-1Q6L8H4 278 aa1.6□□□□□ -2.15
SHANK2-203ENST00000409161 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
SHANK2-203ENST00000409161 AHNAK2Q8IVF2 5795 aa1.56□□□□□ -2.16
SHANK2-203ENST00000409161 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
SHANK2-203ENST00000409161 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.48□□□□□ -2.17
SHANK2-203ENST00000409161 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
SHANK2-203ENST00000409161 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
SHANK2-203ENST00000409161 KRTAP5-7Q6L8G8 165 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 68.5 ms