RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 RNF213Q63HN8 5207 aa4.51□□□□□ -1.69
ITGA6-202ENST00000409080 MT4P47944 62 aa4.5□□□□□ -1.69
ITGA6-202ENST00000409080 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
ITGA6-202ENST00000409080 FAT4Q6V0I7 4981 aa4.49□□□□□ -1.69
ITGA6-202ENST00000409080 MT3P25713 68 aa4.48□□□□□ -1.69
ITGA6-202ENST00000409080 UBR4Q5T4S7 5183 aa4.47□□□□□ -1.69
ITGA6-202ENST00000409080 KRTAP20-1Q3LI63 56 aa4.47□□□□□ -1.69
ITGA6-202ENST00000409080 KRTAP9-7A8MTY7 169 aa4.47□□□□□ -1.69
ITGA6-202ENST00000409080 KRTAP4-7Q9BYR0 210 aa4.45□□□□□ -1.7
ITGA6-202ENST00000409080 KRTAP6-3Q3LI67 103 aa4.44□□□□□ -1.7
ITGA6-202ENST00000409080 LCE1AQ5T7P2 110 aa4.37□□□□□ -1.71
ITGA6-202ENST00000409080 KRTAP2-3P0C7H8 128 aa4.32□□□□□ -1.72
ITGA6-202ENST00000409080 KRTAP2-4Q9BYR9 128 aa4.32□□□□□ -1.72
ITGA6-202ENST00000409080 HMCN2Q8NDA2 5059 aa4.31□□□□□ -1.72
ITGA6-202ENST00000409080 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
ITGA6-202ENST00000409080 KRTAP19-7Q3SYF9 63 aa4.3□□□□□ -1.72
ITGA6-202ENST00000409080 MT1AP04731 61 aa4.26□□□□□ -1.73
ITGA6-202ENST00000409080 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
ITGA6-202ENST00000409080 FSIP2Q5CZC0 6907 aa4.22□□□□□ -1.73
ITGA6-202ENST00000409080 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
ITGA6-202ENST00000409080 SYNE2Q8WXH0 6885 aaKnown RBP4.2□□□□□ -1.74
ITGA6-202ENST00000409080 LCE1DQ5T752 114 aa4.17□□□□□ -1.74
ITGA6-202ENST00000409080 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
ITGA6-202ENST00000409080 KRTAP2-1Q9BYU5 128 aa4.16□□□□□ -1.74
ITGA6-202ENST00000409080 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
ITGA6-202ENST00000409080 LCE1BQ5T7P3 118 aa4.15□□□□□ -1.75
ITGA6-202ENST00000409080 MUC2Q02817 5179 aa4.09□□□□□ -1.75
ITGA6-202ENST00000409080 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
ITGA6-202ENST00000409080 SYNE1Q8NF91 8797 aaKnown RBP4.03□□□□□ -1.76
ITGA6-202ENST00000409080 PRM1P04553 51 aa3.93□□□□□ -1.78
ITGA6-202ENST00000409080 KRTAP9-4Q9BYQ2 154 aa3.92□□□□□ -1.78
ITGA6-202ENST00000409080 KRTAP4-9Q9BYQ8 210 aa3.92□□□□□ -1.78
ITGA6-202ENST00000409080 KRTAP6-1Q3LI64 71 aa3.88□□□□□ -1.79
ITGA6-202ENST00000409080 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
ITGA6-202ENST00000409080 KRTAP5-9P26371 169 aa3.75□□□□□ -1.81
ITGA6-202ENST00000409080 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
ITGA6-202ENST00000409080 USH2AO75445 5202 aa3.71□□□□□ -1.81
ITGA6-202ENST00000409080 NEBP20929 6669 aa3.68□□□□□ -1.82
ITGA6-202ENST00000409080 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
ITGA6-202ENST00000409080 SSPOA2VEC9 5147 aa3.62□□□□□ -1.83
ITGA6-202ENST00000409080 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.83
ITGA6-202ENST00000409080 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
ITGA6-202ENST00000409080 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
ITGA6-202ENST00000409080 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
ITGA6-202ENST00000409080 MACF1Q9UPN3 7388 aaKnown RBP3.52□□□□□ -1.85
ITGA6-202ENST00000409080 FCGBPQ9Y6R7 5405 aaPredicted RBP3.44□□□□□ -1.86
ITGA6-202ENST00000409080 KRTAP20-2Q3LI61 65 aa3.4□□□□□ -1.86
ITGA6-202ENST00000409080 KRTAP4-6Q9BYQ5 205 aa3.36□□□□□ -1.87
ITGA6-202ENST00000409080 KMT2DO14686 5537 aa3.35□□□□□ -1.87
ITGA6-202ENST00000409080 DSTQ03001 7570 aaKnown RBP3.34□□□□□ -1.87
ITGA6-202ENST00000409080 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
ITGA6-202ENST00000409080 GPR98Q8WXG9 6306 aa3.25□□□□□ -1.89
ITGA6-202ENST00000409080 MDN1Q9NU22 5596 aa3.24□□□□□ -1.89
ITGA6-202ENST00000409080 MUC12Q9UKN1 5478 aa3.1□□□□□ -1.91
ITGA6-202ENST00000409080 KRTAP4-11Q9BYQ6 195 aa3.09□□□□□ -1.91
ITGA6-202ENST00000409080 KRTAP5-5Q701N2 237 aaPredicted RBP2.96□□□□□ -1.93
ITGA6-202ENST00000409080 KRTAP5-3Q6L8H2 238 aa2.89□□□□□ -1.95
ITGA6-202ENST00000409080 KRTAP4-12Q9BQ66 201 aa2.87□□□□□ -1.95
ITGA6-202ENST00000409080 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
ITGA6-202ENST00000409080 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
ITGA6-202ENST00000409080 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
ITGA6-202ENST00000409080 AHNAK2Q8IVF2 5795 aa2.78□□□□□ -1.96
ITGA6-202ENST00000409080 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
ITGA6-202ENST00000409080 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
ITGA6-202ENST00000409080 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
ITGA6-202ENST00000409080 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2.01
ITGA6-202ENST00000409080 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
ITGA6-202ENST00000409080 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
ITGA6-202ENST00000409080 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
ITGA6-202ENST00000409080 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
ITGA6-202ENST00000409080 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
ITGA6-202ENST00000409080 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
ITGA6-202ENST00000409080 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
ITGA6-202ENST00000409080 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
ITGA6-202ENST00000409080 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
ITGA6-202ENST00000409080 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
ITGA6-202ENST00000409080 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 259.4 ms