RNA–Protein interactions for RNA: ENST00000406961.5

NCOA1-205, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene NCOA1, Length 7,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-205ENST00000406961 LCE3EQ5T5B0 92 aa5.07□□□□□ -1.6
NCOA1-205ENST00000406961 KRTAP9-2Q9BYQ4 174 aa5.07□□□□□ -1.6
NCOA1-205ENST00000406961 HMCN2Q8NDA2 5059 aa5.03□□□□□ -1.6
NCOA1-205ENST00000406961 LCE2DQ5TA82 110 aaPredicted RBP5.02□□□□□ -1.61
NCOA1-205ENST00000406961 UBR4Q5T4S7 5183 aa5□□□□□ -1.61
NCOA1-205ENST00000406961 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
NCOA1-205ENST00000406961 KRTAP4-3Q9BYR4 195 aa4.98□□□□□ -1.61
NCOA1-205ENST00000406961 KRTAP19-7Q3SYF9 63 aa4.94□□□□□ -1.62
NCOA1-205ENST00000406961 MT3P25713 68 aa4.87□□□□□ -1.63
NCOA1-205ENST00000406961 MT4P47944 62 aa4.85□□□□□ -1.63
NCOA1-205ENST00000406961 FSIP2Q5CZC0 6907 aa4.84□□□□□ -1.63
NCOA1-205ENST00000406961 KRTAP9-6A0A140TA67 174 aa4.75□□□□□ -1.65
NCOA1-205ENST00000406961 MT1AP04731 61 aa4.72□□□□□ -1.65
NCOA1-205ENST00000406961 MUC2Q02817 5179 aa4.68□□□□□ -1.66
NCOA1-205ENST00000406961 PRM1P04553 51 aa4.65□□□□□ -1.67
NCOA1-205ENST00000406961 KRTAP2-3P0C7H8 128 aa4.63□□□□□ -1.67
NCOA1-205ENST00000406961 KRTAP2-4Q9BYR9 128 aa4.63□□□□□ -1.67
NCOA1-205ENST00000406961 KRTAP2-1Q9BYU5 128 aa4.63□□□□□ -1.67
NCOA1-205ENST00000406961 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
NCOA1-205ENST00000406961 LCE1DQ5T752 114 aa4.57□□□□□ -1.68
NCOA1-205ENST00000406961 LCE1BQ5T7P3 118 aa4.56□□□□□ -1.68
NCOA1-205ENST00000406961 KRTAP6-3Q3LI67 103 aa4.54□□□□□ -1.68
NCOA1-205ENST00000406961 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.68
NCOA1-205ENST00000406961 KRTAP9-6A8MVA2 160 aa4.51□□□□□ -1.69
NCOA1-205ENST00000406961 LCE5AQ5TCM9 118 aa4.5□□□□□ -1.69
NCOA1-205ENST00000406961 SYNE2Q8WXH0 6885 aaKnown RBP4.49□□□□□ -1.69
NCOA1-205ENST00000406961 KRTAP9-7A8MTY7 169 aa4.48□□□□□ -1.69
NCOA1-205ENST00000406961 SYNE1Q8NF91 8797 aaKnown RBP4.48□□□□□ -1.69
NCOA1-205ENST00000406961 KRTAP6-1Q3LI64 71 aa4.47□□□□□ -1.69
NCOA1-205ENST00000406961 KRTAP20-1Q3LI63 56 aa4.46□□□□□ -1.7
NCOA1-205ENST00000406961 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.41□□□□□ -1.7
NCOA1-205ENST00000406961 USH2AO75445 5202 aa4.39□□□□□ -1.71
NCOA1-205ENST00000406961 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
NCOA1-205ENST00000406961 KRTAP6-2Q3LI66 62 aa4.36□□□□□ -1.71
NCOA1-205ENST00000406961 LCE4AQ5TA78 99 aa4.28□□□□□ -1.72
NCOA1-205ENST00000406961 OBSCNQ5VST9 7968 aa4.21□□□□□ -1.74
NCOA1-205ENST00000406961 KRTAP2-2Q9BYT5 123 aa4.21□□□□□ -1.74
NCOA1-205ENST00000406961 FCGBPQ9Y6R7 5405 aaPredicted RBP4.06□□□□□ -1.76
NCOA1-205ENST00000406961 KMT2DO14686 5537 aa4.06□□□□□ -1.76
NCOA1-205ENST00000406961 SSPOA2VEC9 5147 aa3.99□□□□□ -1.77
NCOA1-205ENST00000406961 MACF1Q9UPN3 7388 aaKnown RBP3.98□□□□□ -1.77
NCOA1-205ENST00000406961 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
NCOA1-205ENST00000406961 NEBP20929 6669 aa3.88□□□□□ -1.79
NCOA1-205ENST00000406961 DSTQ03001 7570 aaKnown RBP3.81□□□□□ -1.8
NCOA1-205ENST00000406961 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
NCOA1-205ENST00000406961 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
NCOA1-205ENST00000406961 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
NCOA1-205ENST00000406961 MUC12Q9UKN1 5478 aa3.77□□□□□ -1.81
NCOA1-205ENST00000406961 KRTAP4-6Q9BYQ5 205 aa3.74□□□□□ -1.81
NCOA1-205ENST00000406961 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
NCOA1-205ENST00000406961 KRTAP9-9Q9BYP9 154 aa3.62□□□□□ -1.83
NCOA1-205ENST00000406961 MDN1Q9NU22 5596 aa3.56□□□□□ -1.84
NCOA1-205ENST00000406961 KRTAP5-4Q6L8H1 288 aa3.45□□□□□ -1.86
NCOA1-205ENST00000406961 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
NCOA1-205ENST00000406961 KRTAP5-5Q701N2 237 aaPredicted RBP3.4□□□□□ -1.87
NCOA1-205ENST00000406961 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
NCOA1-205ENST00000406961 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.89
NCOA1-205ENST00000406961 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.89
NCOA1-205ENST00000406961 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
NCOA1-205ENST00000406961 GPR98Q8WXG9 6306 aa3.16□□□□□ -1.9
NCOA1-205ENST00000406961 KRTAP5-3Q6L8H2 238 aa3□□□□□ -1.93
NCOA1-205ENST00000406961 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
NCOA1-205ENST00000406961 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
NCOA1-205ENST00000406961 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
NCOA1-205ENST00000406961 AHNAK2Q8IVF2 5795 aa2.77□□□□□ -1.97
NCOA1-205ENST00000406961 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
NCOA1-205ENST00000406961 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
NCOA1-205ENST00000406961 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
NCOA1-205ENST00000406961 KRTAP5-1Q6L8H4 278 aa2.44□□□□□ -2.02
NCOA1-205ENST00000406961 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
NCOA1-205ENST00000406961 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
NCOA1-205ENST00000406961 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
NCOA1-205ENST00000406961 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
NCOA1-205ENST00000406961 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
NCOA1-205ENST00000406961 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
NCOA1-205ENST00000406961 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
NCOA1-205ENST00000406961 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 89.9 ms