RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 BIRC6Q9NR09 4857 aa3.45□□□□□ -1.86
SMCR8-201ENST00000406438 KRTAP20-1Q3LI63 56 aa3.44□□□□□ -1.86
SMCR8-201ENST00000406438 SYNE2Q8WXH0 6885 aaKnown RBP3.44□□□□□ -1.86
SMCR8-201ENST00000406438 KRTAP2-3P0C7H8 128 aa3.42□□□□□ -1.86
SMCR8-201ENST00000406438 KRTAP2-4Q9BYR9 128 aa3.42□□□□□ -1.86
SMCR8-201ENST00000406438 KRTAP2-1Q9BYU5 128 aa3.42□□□□□ -1.86
SMCR8-201ENST00000406438 MT1AP04731 61 aa3.4□□□□□ -1.87
SMCR8-201ENST00000406438 KRTAP9-6A0A140TA67 174 aa3.4□□□□□ -1.87
SMCR8-201ENST00000406438 RYR2Q92736 4967 aa3.37□□□□□ -1.87
SMCR8-201ENST00000406438 KRTAP4-9Q9BYQ8 210 aa3.35□□□□□ -1.87
SMCR8-201ENST00000406438 LCE1CQ5T751 118 aa3.31□□□□□ -1.88
SMCR8-201ENST00000406438 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
SMCR8-201ENST00000406438 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
SMCR8-201ENST00000406438 LCE1AQ5T7P2 110 aa3.31□□□□□ -1.88
SMCR8-201ENST00000406438 UBR4Q5T4S7 5183 aa3.31□□□□□ -1.88
SMCR8-201ENST00000406438 KMT2CQ8NEZ4 4911 aaKnown RBP3.31□□□□□ -1.88
SMCR8-201ENST00000406438 KRTAP19-7Q3SYF9 63 aa3.31□□□□□ -1.88
SMCR8-201ENST00000406438 HERC2O95714 4834 aa3.3□□□□□ -1.88
SMCR8-201ENST00000406438 ABCA13Q86UQ4 5058 aa3.28□□□□□ -1.88
SMCR8-201ENST00000406438 KIAA1109Q2LD37 5005 aa3.27□□□□□ -1.89
SMCR8-201ENST00000406438 KRTAP9-7A8MTY7 169 aa3.25□□□□□ -1.89
SMCR8-201ENST00000406438 KRTAP6-2Q3LI66 62 aa3.25□□□□□ -1.89
SMCR8-201ENST00000406438 LCE4AQ5TA78 99 aa3.23□□□□□ -1.89
SMCR8-201ENST00000406438 EPPK1P58107 5090 aaKnown RBP3.22□□□□□ -1.89
SMCR8-201ENST00000406438 LCE2AQ5TA79 106 aaPredicted RBP3.19□□□□□ -1.9
SMCR8-201ENST00000406438 KRTAP9-4Q9BYQ2 154 aa3.19□□□□□ -1.9
SMCR8-201ENST00000406438 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
SMCR8-201ENST00000406438 HERC1Q15751 4861 aa3.17□□□□□ -1.9
SMCR8-201ENST00000406438 KRTAP6-3Q3LI67 103 aa3.15□□□□□ -1.91
SMCR8-201ENST00000406438 KRTAP2-2Q9BYT5 123 aa3.09□□□□□ -1.91
SMCR8-201ENST00000406438 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.04□□□□□ -1.92
SMCR8-201ENST00000406438 HMCN2Q8NDA2 5059 aa3.04□□□□□ -1.92
SMCR8-201ENST00000406438 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
SMCR8-201ENST00000406438 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
SMCR8-201ENST00000406438 SYNE1Q8NF91 8797 aaKnown RBP2.97□□□□□ -1.93
SMCR8-201ENST00000406438 RNF213Q63HN8 5207 aa2.95□□□□□ -1.94
SMCR8-201ENST00000406438 FSIP2Q5CZC0 6907 aa2.85□□□□□ -1.95
SMCR8-201ENST00000406438 FAT4Q6V0I7 4981 aa2.83□□□□□ -1.96
SMCR8-201ENST00000406438 KRTAP4-11Q9BYQ6 195 aa2.71□□□□□ -1.98
SMCR8-201ENST00000406438 USH2AO75445 5202 aa2.7□□□□□ -1.98
SMCR8-201ENST00000406438 MUC2Q02817 5179 aa2.66□□□□□ -1.98
SMCR8-201ENST00000406438 KRTAP20-2Q3LI61 65 aa2.65□□□□□ -1.99
SMCR8-201ENST00000406438 KRTAP4-6Q9BYQ5 205 aa2.6□□□□□ -1.99
SMCR8-201ENST00000406438 KRTAP5-9P26371 169 aa2.59□□□□□ -2
SMCR8-201ENST00000406438 OBSCNQ5VST9 7968 aa2.56□□□□□ -2
SMCR8-201ENST00000406438 SSPOA2VEC9 5147 aa2.55□□□□□ -2
SMCR8-201ENST00000406438 KMT2DO14686 5537 aa2.52□□□□□ -2.01
SMCR8-201ENST00000406438 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
SMCR8-201ENST00000406438 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
SMCR8-201ENST00000406438 KRTAP4-2Q9BYR5 136 aa2.45□□□□□ -2.02
SMCR8-201ENST00000406438 DSTQ03001 7570 aaKnown RBP2.42□□□□□ -2.02
SMCR8-201ENST00000406438 KRTAP5-4Q6L8H1 288 aa2.41□□□□□ -2.02
SMCR8-201ENST00000406438 NEBP20929 6669 aa2.34□□□□□ -2.03
SMCR8-201ENST00000406438 FCGBPQ9Y6R7 5405 aaPredicted RBP2.33□□□□□ -2.04
SMCR8-201ENST00000406438 KRTAP5-5Q701N2 237 aaPredicted RBP2.31□□□□□ -2.04
SMCR8-201ENST00000406438 MACF1Q9UPN3 7388 aaKnown RBP2.3□□□□□ -2.04
SMCR8-201ENST00000406438 MDN1Q9NU22 5596 aa2.21□□□□□ -2.06
SMCR8-201ENST00000406438 GPR98Q8WXG9 6306 aa2.19□□□□□ -2.06
SMCR8-201ENST00000406438 MUC12Q9UKN1 5478 aa2.06□□□□□ -2.08
SMCR8-201ENST00000406438 KRTAP5-3Q6L8H2 238 aa2.06□□□□□ -2.08
SMCR8-201ENST00000406438 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
SMCR8-201ENST00000406438 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
SMCR8-201ENST00000406438 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
SMCR8-201ENST00000406438 MUC5BQ9HC84 5762 aaPredicted RBP1.93□□□□□ -2.1
SMCR8-201ENST00000406438 HMCN1Q96RW7 5635 aa1.9□□□□□ -2.11
SMCR8-201ENST00000406438 MUC5ACP98088 5654 aa1.88□□□□□ -2.11
SMCR8-201ENST00000406438 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
SMCR8-201ENST00000406438 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
SMCR8-201ENST00000406438 KRTAP5-10Q6L8G5 202 aa1.83□□□□□ -2.12
SMCR8-201ENST00000406438 KRTAP5-2Q701N4 177 aa1.79□□□□□ -2.12
SMCR8-201ENST00000406438 KRTAP5-11Q6L8G4 156 aa1.66□□□□□ -2.14
SMCR8-201ENST00000406438 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
SMCR8-201ENST00000406438 KRTAP5-1Q6L8H4 278 aa1.62□□□□□ -2.15
SMCR8-201ENST00000406438 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.53□□□□□ -2.16
SMCR8-201ENST00000406438 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
SMCR8-201ENST00000406438 KRTAP5-7Q6L8G8 165 aa1.31□□□□□ -2.2
SMCR8-201ENST00000406438 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 82.4 ms