RNA–Protein interactions for RNA: ENST00000405581.3

NRXN1-209, Transcript of neurexin 1, humanhuman

TSL 1 (best) BASIC

Gene NRXN1, Length 5,078 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-209ENST00000405581 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
NRXN1-209ENST00000405581 LCE2AQ5TA79 106 aaPredicted RBP5.34□□□□□ -1.56
NRXN1-209ENST00000405581 KRTAP9-2Q9BYQ4 174 aa5.31□□□□□ -1.56
NRXN1-209ENST00000405581 FAT4Q6V0I7 4981 aa5.28□□□□□ -1.56
NRXN1-209ENST00000405581 MT4P47944 62 aa5.28□□□□□ -1.56
NRXN1-209ENST00000405581 RNF213Q63HN8 5207 aa5.28□□□□□ -1.56
NRXN1-209ENST00000405581 UBR4Q5T4S7 5183 aa5.24□□□□□ -1.57
NRXN1-209ENST00000405581 PRM1P04553 51 aa5.16□□□□□ -1.58
NRXN1-209ENST00000405581 LCE1BQ5T7P3 118 aa5.14□□□□□ -1.59
NRXN1-209ENST00000405581 MT1AP04731 61 aa5.13□□□□□ -1.59
NRXN1-209ENST00000405581 LCE1DQ5T752 114 aa5.13□□□□□ -1.59
NRXN1-209ENST00000405581 KRTAP19-7Q3SYF9 63 aa5.12□□□□□ -1.59
NRXN1-209ENST00000405581 HMCN2Q8NDA2 5059 aa5.12□□□□□ -1.59
NRXN1-209ENST00000405581 LOC100996750A0A140TA64 210 aa5.1□□□□□ -1.59
NRXN1-209ENST00000405581 KRTAP4-3Q9BYR4 195 aa5.07□□□□□ -1.6
NRXN1-209ENST00000405581 KRTAP9-6A0A140TA67 174 aa5.04□□□□□ -1.6
NRXN1-209ENST00000405581 FSIP2Q5CZC0 6907 aa5.03□□□□□ -1.6
NRXN1-209ENST00000405581 LCE1AQ5T7P2 110 aa4.97□□□□□ -1.61
NRXN1-209ENST00000405581 KRTAP2-3P0C7H8 128 aa4.93□□□□□ -1.62
NRXN1-209ENST00000405581 KRTAP2-4Q9BYR9 128 aa4.93□□□□□ -1.62
NRXN1-209ENST00000405581 KRTAP2-1Q9BYU5 128 aa4.93□□□□□ -1.62
NRXN1-209ENST00000405581 KRTAP20-1Q3LI63 56 aa4.91□□□□□ -1.62
NRXN1-209ENST00000405581 MUC2Q02817 5179 aa4.88□□□□□ -1.63
NRXN1-209ENST00000405581 LCE5AQ5TCM9 118 aa4.85□□□□□ -1.63
NRXN1-209ENST00000405581 KRTAP6-3Q3LI67 103 aa4.84□□□□□ -1.63
NRXN1-209ENST00000405581 OBSCNQ5VST9 7968 aa4.82□□□□□ -1.64
NRXN1-209ENST00000405581 KRTAP9-7A8MTY7 169 aa4.79□□□□□ -1.64
NRXN1-209ENST00000405581 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
NRXN1-209ENST00000405581 KRTAP4-9Q9BYQ8 210 aa4.74□□□□□ -1.65
NRXN1-209ENST00000405581 SYNE2Q8WXH0 6885 aaKnown RBP4.7□□□□□ -1.66
NRXN1-209ENST00000405581 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
NRXN1-209ENST00000405581 KRTAP6-1Q3LI64 71 aa4.65□□□□□ -1.67
NRXN1-209ENST00000405581 KRTAP6-2Q3LI66 62 aa4.64□□□□□ -1.67
NRXN1-209ENST00000405581 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.63□□□□□ -1.67
NRXN1-209ENST00000405581 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
NRXN1-209ENST00000405581 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
NRXN1-209ENST00000405581 USH2AO75445 5202 aa4.43□□□□□ -1.7
NRXN1-209ENST00000405581 LCE1CQ5T751 118 aa4.42□□□□□ -1.7
NRXN1-209ENST00000405581 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
NRXN1-209ENST00000405581 LCE1FQ5T754 118 aa4.42□□□□□ -1.7
NRXN1-209ENST00000405581 FCGBPQ9Y6R7 5405 aaPredicted RBP4.28□□□□□ -1.72
NRXN1-209ENST00000405581 KRTAP5-9P26371 169 aa4.18□□□□□ -1.74
NRXN1-209ENST00000405581 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.75
NRXN1-209ENST00000405581 DSTQ03001 7570 aaKnown RBP4.14□□□□□ -1.75
NRXN1-209ENST00000405581 MACF1Q9UPN3 7388 aaKnown RBP4.13□□□□□ -1.75
NRXN1-209ENST00000405581 KMT2DO14686 5537 aa4.12□□□□□ -1.75
NRXN1-209ENST00000405581 SSPOA2VEC9 5147 aa4.03□□□□□ -1.76
NRXN1-209ENST00000405581 NEBP20929 6669 aa4.03□□□□□ -1.76
NRXN1-209ENST00000405581 MUC19Q7Z5P9 8384 aa3.96□□□□□ -1.78
NRXN1-209ENST00000405581 GPR98Q8WXG9 6306 aa3.96□□□□□ -1.78
NRXN1-209ENST00000405581 MUC12Q9UKN1 5478 aa3.89□□□□□ -1.79
NRXN1-209ENST00000405581 KRTAP4-6Q9BYQ5 205 aa3.85□□□□□ -1.79
NRXN1-209ENST00000405581 KRTAP20-2Q3LI61 65 aa3.84□□□□□ -1.79
NRXN1-209ENST00000405581 MDN1Q9NU22 5596 aa3.82□□□□□ -1.8
NRXN1-209ENST00000405581 KRTAP4-11Q9BYQ6 195 aa3.75□□□□□ -1.81
NRXN1-209ENST00000405581 KRTAP5-4Q6L8H1 288 aa3.61□□□□□ -1.83
NRXN1-209ENST00000405581 KRTAP5-5Q701N2 237 aaPredicted RBP3.5□□□□□ -1.85
NRXN1-209ENST00000405581 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
NRXN1-209ENST00000405581 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
NRXN1-209ENST00000405581 KRTAP4-2Q9BYR5 136 aa3.42□□□□□ -1.86
NRXN1-209ENST00000405581 AHNAK2Q8IVF2 5795 aa3.18□□□□□ -1.9
NRXN1-209ENST00000405581 MUC5ACP98088 5654 aa3.16□□□□□ -1.9
NRXN1-209ENST00000405581 KRTAP5-3Q6L8H2 238 aa3.16□□□□□ -1.9
NRXN1-209ENST00000405581 HMCN1Q96RW7 5635 aa3.05□□□□□ -1.92
NRXN1-209ENST00000405581 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
NRXN1-209ENST00000405581 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
NRXN1-209ENST00000405581 KRTAP5-10Q6L8G5 202 aa2.78□□□□□ -1.97
NRXN1-209ENST00000405581 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
NRXN1-209ENST00000405581 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
NRXN1-209ENST00000405581 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
NRXN1-209ENST00000405581 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
NRXN1-209ENST00000405581 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2
NRXN1-209ENST00000405581 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
NRXN1-209ENST00000405581 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.33□□□□□ -2.04
NRXN1-209ENST00000405581 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
NRXN1-209ENST00000405581 KRTAP5-7Q6L8G8 165 aa2.14□□□□□ -2.07
NRXN1-209ENST00000405581 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 125.8 ms