RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 KRTAP20-1Q3LI63 56 aa4.38□□□□□ -1.71
CACNA1C-211ENST00000399617 LCE3EQ5T5B0 92 aa4.38□□□□□ -1.71
CACNA1C-211ENST00000399617 KRTAP19-2Q3LHN2 52 aa4.36□□□□□ -1.71
CACNA1C-211ENST00000399617 FLGP20930 4061 aaPredicted RBP4.36□□□□□ -1.71
CACNA1C-211ENST00000399617 EPPK1P58107 5090 aaKnown RBP4.35□□□□□ -1.71
CACNA1C-211ENST00000399617 MUC17Q685J3 4493 aa4.35□□□□□ -1.71
CACNA1C-211ENST00000399617 KRTAP9-7A8MTY7 169 aa4.34□□□□□ -1.71
CACNA1C-211ENST00000399617 MT1MQ8N339 61 aa4.34□□□□□ -1.71
CACNA1C-211ENST00000399617 MT3P25713 68 aa4.33□□□□□ -1.72
CACNA1C-211ENST00000399617 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
CACNA1C-211ENST00000399617 SYNE2Q8WXH0 6885 aaKnown RBP4.26□□□□□ -1.73
CACNA1C-211ENST00000399617 LCE5AQ5TCM9 118 aa4.26□□□□□ -1.73
CACNA1C-211ENST00000399617 ABCA13Q86UQ4 5058 aa4.23□□□□□ -1.73
CACNA1C-211ENST00000399617 PRM1P04553 51 aa4.17□□□□□ -1.74
CACNA1C-211ENST00000399617 LCE2AQ5TA79 106 aaPredicted RBP4.16□□□□□ -1.74
CACNA1C-211ENST00000399617 FAT4Q6V0I7 4981 aa4.13□□□□□ -1.75
CACNA1C-211ENST00000399617 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.09□□□□□ -1.75
CACNA1C-211ENST00000399617 LCE4AQ5TA78 99 aa4.04□□□□□ -1.76
CACNA1C-211ENST00000399617 MUC2Q02817 5179 aa4.03□□□□□ -1.76
CACNA1C-211ENST00000399617 HMCN2Q8NDA2 5059 aa4.02□□□□□ -1.77
CACNA1C-211ENST00000399617 KRTAP2-3P0C7H8 128 aa4.01□□□□□ -1.77
CACNA1C-211ENST00000399617 KRTAP2-4Q9BYR9 128 aa4.01□□□□□ -1.77
CACNA1C-211ENST00000399617 UBR4Q5T4S7 5183 aa3.98□□□□□ -1.77
CACNA1C-211ENST00000399617 KRTAP6-3Q3LI67 103 aa3.96□□□□□ -1.78
CACNA1C-211ENST00000399617 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
CACNA1C-211ENST00000399617 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
CACNA1C-211ENST00000399617 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
CACNA1C-211ENST00000399617 LCE1AQ5T7P2 110 aa3.96□□□□□ -1.78
CACNA1C-211ENST00000399617 KRTAP19-7Q3SYF9 63 aa3.96□□□□□ -1.78
CACNA1C-211ENST00000399617 RNF213Q63HN8 5207 aa3.94□□□□□ -1.78
CACNA1C-211ENST00000399617 KRTAP6-2Q3LI66 62 aa3.91□□□□□ -1.78
CACNA1C-211ENST00000399617 MT1AP04731 61 aa3.9□□□□□ -1.78
CACNA1C-211ENST00000399617 KRTAP2-1Q9BYU5 128 aa3.87□□□□□ -1.79
CACNA1C-211ENST00000399617 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
CACNA1C-211ENST00000399617 KRTAP6-1Q3LI64 71 aa3.85□□□□□ -1.79
CACNA1C-211ENST00000399617 KRTAP9-4Q9BYQ2 154 aa3.71□□□□□ -1.82
CACNA1C-211ENST00000399617 SYNE1Q8NF91 8797 aaKnown RBP3.7□□□□□ -1.82
CACNA1C-211ENST00000399617 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
CACNA1C-211ENST00000399617 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
CACNA1C-211ENST00000399617 KRTAP9-9Q9BYP9 154 aa3.53□□□□□ -1.84
CACNA1C-211ENST00000399617 KMT2DO14686 5537 aa3.47□□□□□ -1.85
CACNA1C-211ENST00000399617 MACF1Q9UPN3 7388 aaKnown RBP3.44□□□□□ -1.86
CACNA1C-211ENST00000399617 KRTAP4-6Q9BYQ5 205 aa3.44□□□□□ -1.86
CACNA1C-211ENST00000399617 DSTQ03001 7570 aaKnown RBP3.43□□□□□ -1.86
CACNA1C-211ENST00000399617 USH2AO75445 5202 aa3.4□□□□□ -1.87
CACNA1C-211ENST00000399617 FCGBPQ9Y6R7 5405 aaPredicted RBP3.37□□□□□ -1.87
CACNA1C-211ENST00000399617 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
CACNA1C-211ENST00000399617 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
CACNA1C-211ENST00000399617 NEBP20929 6669 aa3.3□□□□□ -1.88
CACNA1C-211ENST00000399617 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
CACNA1C-211ENST00000399617 KRTAP20-2Q3LI61 65 aa3.24□□□□□ -1.89
CACNA1C-211ENST00000399617 SSPOA2VEC9 5147 aa3.21□□□□□ -1.9
CACNA1C-211ENST00000399617 KRTAP4-11Q9BYQ6 195 aa3.19□□□□□ -1.9
CACNA1C-211ENST00000399617 KRTAP5-9P26371 169 aa3.1□□□□□ -1.91
CACNA1C-211ENST00000399617 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
CACNA1C-211ENST00000399617 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
CACNA1C-211ENST00000399617 MDN1Q9NU22 5596 aa2.81□□□□□ -1.96
CACNA1C-211ENST00000399617 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
CACNA1C-211ENST00000399617 GPR98Q8WXG9 6306 aa2.68□□□□□ -1.98
CACNA1C-211ENST00000399617 KRTAP5-3Q6L8H2 238 aa2.67□□□□□ -1.98
CACNA1C-211ENST00000399617 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
CACNA1C-211ENST00000399617 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
CACNA1C-211ENST00000399617 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
CACNA1C-211ENST00000399617 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
CACNA1C-211ENST00000399617 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
CACNA1C-211ENST00000399617 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.09
CACNA1C-211ENST00000399617 KRTAP5-10Q6L8G5 202 aa2.01□□□□□ -2.09
CACNA1C-211ENST00000399617 KRTAP5-2Q701N4 177 aa1.97□□□□□ -2.09
CACNA1C-211ENST00000399617 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
CACNA1C-211ENST00000399617 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
CACNA1C-211ENST00000399617 AHNAKQ09666 5890 aaKnown RBP1.85□□□□□ -2.11
CACNA1C-211ENST00000399617 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
CACNA1C-211ENST00000399617 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
CACNA1C-211ENST00000399617 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
CACNA1C-211ENST00000399617 KRTAP5-7Q6L8G8 165 aa1.64□□□□□ -2.15
CACNA1C-211ENST00000399617 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.59□□□□□ -2.15
CACNA1C-211ENST00000399617 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 330.3 ms