RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 KRTAP9-6A0A140TA67 174 aa6.55□□□□□ -1.36
ANKRD28-201ENST00000399451 LOC100996750A0A140TA64 210 aa6.53□□□□□ -1.36
ANKRD28-201ENST00000399451 LCE1DQ5T752 114 aa6.53□□□□□ -1.36
ANKRD28-201ENST00000399451 PRM1P04553 51 aa6.52□□□□□ -1.37
ANKRD28-201ENST00000399451 KMT2CQ8NEZ4 4911 aaKnown RBP6.51□□□□□ -1.37
ANKRD28-201ENST00000399451 KRTAP4-3Q9BYR4 195 aa6.45□□□□□ -1.38
ANKRD28-201ENST00000399451 KRTAP20-1Q3LI63 56 aa6.38□□□□□ -1.39
ANKRD28-201ENST00000399451 KRTAP19-7Q3SYF9 63 aa6.26□□□□□ -1.41
ANKRD28-201ENST00000399451 LCE5AQ5TCM9 118 aa6.23□□□□□ -1.41
ANKRD28-201ENST00000399451 MT1AP04731 61 aa6.21□□□□□ -1.42
ANKRD28-201ENST00000399451 LCE2AQ5TA79 106 aaPredicted RBP6.18□□□□□ -1.42
ANKRD28-201ENST00000399451 KRTAP9-7A8MTY7 169 aa6.18□□□□□ -1.42
ANKRD28-201ENST00000399451 KRTAP2-3P0C7H8 128 aa6.16□□□□□ -1.42
ANKRD28-201ENST00000399451 KRTAP2-4Q9BYR9 128 aa6.16□□□□□ -1.42
ANKRD28-201ENST00000399451 KRTAP2-1Q9BYU5 128 aa6.16□□□□□ -1.42
ANKRD28-201ENST00000399451 EPPK1P58107 5090 aaKnown RBP6.13□□□□□ -1.43
ANKRD28-201ENST00000399451 ABCA13Q86UQ4 5058 aa6.08□□□□□ -1.44
ANKRD28-201ENST00000399451 KRTAP4-9Q9BYQ8 210 aa6.08□□□□□ -1.44
ANKRD28-201ENST00000399451 KRTAP6-3Q3LI67 103 aa6□□□□□ -1.45
ANKRD28-201ENST00000399451 HMCN2Q8NDA2 5059 aa5.95□□□□□ -1.46
ANKRD28-201ENST00000399451 FAT4Q6V0I7 4981 aa5.91□□□□□ -1.46
ANKRD28-201ENST00000399451 LCE1AQ5T7P2 110 aa5.9□□□□□ -1.46
ANKRD28-201ENST00000399451 RNF213Q63HN8 5207 aa5.88□□□□□ -1.47
ANKRD28-201ENST00000399451 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.85□□□□□ -1.47
ANKRD28-201ENST00000399451 LCE4AQ5TA78 99 aa5.83□□□□□ -1.48
ANKRD28-201ENST00000399451 KRTAP6-2Q3LI66 62 aa5.81□□□□□ -1.48
ANKRD28-201ENST00000399451 KRTAP6-1Q3LI64 71 aa5.81□□□□□ -1.48
ANKRD28-201ENST00000399451 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
ANKRD28-201ENST00000399451 SYNE2Q8WXH0 6885 aaKnown RBP5.78□□□□□ -1.48
ANKRD28-201ENST00000399451 KRTAP2-2Q9BYT5 123 aa5.77□□□□□ -1.48
ANKRD28-201ENST00000399451 LCE1CQ5T751 118 aa5.76□□□□□ -1.49
ANKRD28-201ENST00000399451 LCE1EQ5T753 118 aa5.76□□□□□ -1.49
ANKRD28-201ENST00000399451 LCE1FQ5T754 118 aa5.76□□□□□ -1.49
ANKRD28-201ENST00000399451 KRTAP9-4Q9BYQ2 154 aa5.74□□□□□ -1.49
ANKRD28-201ENST00000399451 FSIP2Q5CZC0 6907 aa5.7□□□□□ -1.5
ANKRD28-201ENST00000399451 UBR4Q5T4S7 5183 aa5.69□□□□□ -1.5
ANKRD28-201ENST00000399451 SYNE1Q8NF91 8797 aaKnown RBP5.54□□□□□ -1.52
ANKRD28-201ENST00000399451 MUC2Q02817 5179 aa5.51□□□□□ -1.53
ANKRD28-201ENST00000399451 OBSCNQ5VST9 7968 aa5.31□□□□□ -1.56
ANKRD28-201ENST00000399451 KRTAP9-9Q9BYP9 154 aa5.3□□□□□ -1.56
ANKRD28-201ENST00000399451 USH2AO75445 5202 aa4.88□□□□□ -1.63
ANKRD28-201ENST00000399451 KRTAP4-6Q9BYQ5 205 aa4.85□□□□□ -1.63
ANKRD28-201ENST00000399451 KRTAP5-9P26371 169 aa4.81□□□□□ -1.64
ANKRD28-201ENST00000399451 FCGBPQ9Y6R7 5405 aaPredicted RBP4.78□□□□□ -1.64
ANKRD28-201ENST00000399451 KRTAP4-11Q9BYQ6 195 aa4.77□□□□□ -1.65
ANKRD28-201ENST00000399451 KRTAP20-2Q3LI61 65 aa4.75□□□□□ -1.65
ANKRD28-201ENST00000399451 NEBP20929 6669 aa4.74□□□□□ -1.65
ANKRD28-201ENST00000399451 KMT2DO14686 5537 aa4.71□□□□□ -1.66
ANKRD28-201ENST00000399451 SSPOA2VEC9 5147 aa4.59□□□□□ -1.67
ANKRD28-201ENST00000399451 DSTQ03001 7570 aaKnown RBP4.58□□□□□ -1.68
ANKRD28-201ENST00000399451 MACF1Q9UPN3 7388 aaKnown RBP4.58□□□□□ -1.68
ANKRD28-201ENST00000399451 KRTAP4-12Q9BQ66 201 aa4.53□□□□□ -1.68
ANKRD28-201ENST00000399451 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
ANKRD28-201ENST00000399451 KRTAP4-4Q9BYR3 166 aa4.52□□□□□ -1.69
ANKRD28-201ENST00000399451 KRTAP5-4Q6L8H1 288 aa4.43□□□□□ -1.7
ANKRD28-201ENST00000399451 KRTAP5-5Q701N2 237 aaPredicted RBP4.37□□□□□ -1.71
ANKRD28-201ENST00000399451 MUC12Q9UKN1 5478 aa4.22□□□□□ -1.73
ANKRD28-201ENST00000399451 MUC19Q7Z5P9 8384 aa4.01□□□□□ -1.77
ANKRD28-201ENST00000399451 GPR98Q8WXG9 6306 aa3.99□□□□□ -1.77
ANKRD28-201ENST00000399451 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
ANKRD28-201ENST00000399451 KRTAP5-3Q6L8H2 238 aa3.88□□□□□ -1.79
ANKRD28-201ENST00000399451 KRTAP5-8O75690 187 aa3.57□□□□□ -1.84
ANKRD28-201ENST00000399451 MUC5ACP98088 5654 aa3.51□□□□□ -1.85
ANKRD28-201ENST00000399451 PHGR1C9JFL3 82 aa3.51□□□□□ -1.85
ANKRD28-201ENST00000399451 KRTAP5-10Q6L8G5 202 aa3.46□□□□□ -1.86
ANKRD28-201ENST00000399451 KRTAP5-2Q701N4 177 aa3.31□□□□□ -1.88
ANKRD28-201ENST00000399451 AHNAK2Q8IVF2 5795 aa3.23□□□□□ -1.89
ANKRD28-201ENST00000399451 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
ANKRD28-201ENST00000399451 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
ANKRD28-201ENST00000399451 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
ANKRD28-201ENST00000399451 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
ANKRD28-201ENST00000399451 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.95
ANKRD28-201ENST00000399451 AHNAKQ09666 5890 aaKnown RBP2.79□□□□□ -1.96
ANKRD28-201ENST00000399451 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
ANKRD28-201ENST00000399451 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
ANKRD28-201ENST00000399451 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
ANKRD28-201ENST00000399451 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 7.2 ms