RNA–Protein interactions for RNA: ENST00000399408.6

ABCC1-201, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 5 BASIC

Gene ABCC1, Length 6,594 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-201ENST00000399408 LCE2AQ5TA79 106 aaPredicted RBP4.75□□□□□ -1.65
ABCC1-201ENST00000399408 UBR4Q5T4S7 5183 aa4.74□□□□□ -1.65
ABCC1-201ENST00000399408 LCE2DQ5TA82 110 aaPredicted RBP4.73□□□□□ -1.65
ABCC1-201ENST00000399408 LOC100996750A0A140TA64 210 aa4.7□□□□□ -1.66
ABCC1-201ENST00000399408 KRTAP9-2Q9BYQ4 174 aa4.69□□□□□ -1.66
ABCC1-201ENST00000399408 MT3P25713 68 aa4.68□□□□□ -1.66
ABCC1-201ENST00000399408 KRTAP4-3Q9BYR4 195 aa4.68□□□□□ -1.66
ABCC1-201ENST00000399408 KRTAP19-7Q3SYF9 63 aa4.68□□□□□ -1.66
ABCC1-201ENST00000399408 HMCN2Q8NDA2 5059 aa4.65□□□□□ -1.66
ABCC1-201ENST00000399408 FSIP2Q5CZC0 6907 aa4.59□□□□□ -1.67
ABCC1-201ENST00000399408 SYNE1Q8NF91 8797 aaKnown RBP4.58□□□□□ -1.68
ABCC1-201ENST00000399408 MT4P47944 62 aa4.57□□□□□ -1.68
ABCC1-201ENST00000399408 MT1AP04731 61 aa4.51□□□□□ -1.69
ABCC1-201ENST00000399408 PRM1P04553 51 aa4.49□□□□□ -1.69
ABCC1-201ENST00000399408 MUC2Q02817 5179 aa4.46□□□□□ -1.7
ABCC1-201ENST00000399408 KRTAP2-3P0C7H8 128 aa4.44□□□□□ -1.7
ABCC1-201ENST00000399408 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
ABCC1-201ENST00000399408 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
ABCC1-201ENST00000399408 KRTAP9-6A0A140TA67 174 aa4.39□□□□□ -1.71
ABCC1-201ENST00000399408 LCE1DQ5T752 114 aa4.37□□□□□ -1.71
ABCC1-201ENST00000399408 LCE1BQ5T7P3 118 aa4.36□□□□□ -1.71
ABCC1-201ENST00000399408 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
ABCC1-201ENST00000399408 LCE1AQ5T7P2 110 aa4.31□□□□□ -1.72
ABCC1-201ENST00000399408 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
ABCC1-201ENST00000399408 SYNE2Q8WXH0 6885 aaKnown RBP4.26□□□□□ -1.73
ABCC1-201ENST00000399408 LCE5AQ5TCM9 118 aa4.25□□□□□ -1.73
ABCC1-201ENST00000399408 KRTAP6-3Q3LI67 103 aa4.24□□□□□ -1.73
ABCC1-201ENST00000399408 KRTAP6-1Q3LI64 71 aa4.23□□□□□ -1.73
ABCC1-201ENST00000399408 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
ABCC1-201ENST00000399408 KRTAP20-1Q3LI63 56 aa4.17□□□□□ -1.74
ABCC1-201ENST00000399408 KRTAP9-7A8MTY7 169 aa4.16□□□□□ -1.74
ABCC1-201ENST00000399408 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.75
ABCC1-201ENST00000399408 KRTAP6-2Q3LI66 62 aa4.13□□□□□ -1.75
ABCC1-201ENST00000399408 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.09□□□□□ -1.76
ABCC1-201ENST00000399408 USH2AO75445 5202 aa4.07□□□□□ -1.76
ABCC1-201ENST00000399408 LCE4AQ5TA78 99 aa4.05□□□□□ -1.76
ABCC1-201ENST00000399408 KRTAP2-2Q9BYT5 123 aa3.96□□□□□ -1.78
ABCC1-201ENST00000399408 FCGBPQ9Y6R7 5405 aaPredicted RBP3.94□□□□□ -1.78
ABCC1-201ENST00000399408 KMT2DO14686 5537 aa3.76□□□□□ -1.81
ABCC1-201ENST00000399408 DSTQ03001 7570 aaKnown RBP3.74□□□□□ -1.81
ABCC1-201ENST00000399408 KRTAP5-9P26371 169 aa3.71□□□□□ -1.82
ABCC1-201ENST00000399408 MACF1Q9UPN3 7388 aaKnown RBP3.7□□□□□ -1.82
ABCC1-201ENST00000399408 SSPOA2VEC9 5147 aa3.7□□□□□ -1.82
ABCC1-201ENST00000399408 NEBP20929 6669 aa3.64□□□□□ -1.83
ABCC1-201ENST00000399408 LCE1CQ5T751 118 aa3.64□□□□□ -1.83
ABCC1-201ENST00000399408 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
ABCC1-201ENST00000399408 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
ABCC1-201ENST00000399408 MUC12Q9UKN1 5478 aa3.55□□□□□ -1.84
ABCC1-201ENST00000399408 KRTAP4-6Q9BYQ5 205 aa3.49□□□□□ -1.85
ABCC1-201ENST00000399408 KRTAP20-2Q3LI61 65 aa3.46□□□□□ -1.86
ABCC1-201ENST00000399408 MDN1Q9NU22 5596 aa3.45□□□□□ -1.86
ABCC1-201ENST00000399408 KRTAP9-9Q9BYP9 154 aa3.44□□□□□ -1.86
ABCC1-201ENST00000399408 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
ABCC1-201ENST00000399408 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
ABCC1-201ENST00000399408 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
ABCC1-201ENST00000399408 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
ABCC1-201ENST00000399408 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
ABCC1-201ENST00000399408 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
ABCC1-201ENST00000399408 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
ABCC1-201ENST00000399408 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
ABCC1-201ENST00000399408 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
ABCC1-201ENST00000399408 KRTAP5-3Q6L8H2 238 aa2.82□□□□□ -1.96
ABCC1-201ENST00000399408 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
ABCC1-201ENST00000399408 AHNAK2Q8IVF2 5795 aa2.73□□□□□ -1.97
ABCC1-201ENST00000399408 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
ABCC1-201ENST00000399408 KRTAP5-8O75690 187 aa2.57□□□□□ -2
ABCC1-201ENST00000399408 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
ABCC1-201ENST00000399408 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
ABCC1-201ENST00000399408 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
ABCC1-201ENST00000399408 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
ABCC1-201ENST00000399408 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
ABCC1-201ENST00000399408 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
ABCC1-201ENST00000399408 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
ABCC1-201ENST00000399408 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
ABCC1-201ENST00000399408 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
ABCC1-201ENST00000399408 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
ABCC1-201ENST00000399408 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 71.9 ms