RNA–Protein interactions for RNA: ENST00000398399.6

VGLL3-202, Transcript of vestigial like family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VGLL3, Length 10,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-202ENST00000398399 LPAP08519 4548 aa3.75□□□□□ -1.81
VGLL3-202ENST00000398399 KRTAP4-3Q9BYR4 195 aa3.71□□□□□ -1.82
VGLL3-202ENST00000398399 KMT2CQ8NEZ4 4911 aaKnown RBP3.69□□□□□ -1.82
VGLL3-202ENST00000398399 KRTAP4-9Q9BYQ8 210 aa3.66□□□□□ -1.82
VGLL3-202ENST00000398399 PCLOQ9Y6V0 5065 aa3.66□□□□□ -1.82
VGLL3-202ENST00000398399 KRTAP9-2Q9BYQ4 174 aa3.59□□□□□ -1.83
VGLL3-202ENST00000398399 BIRC6Q9NR09 4857 aa3.59□□□□□ -1.83
VGLL3-202ENST00000398399 LCE5AQ5TCM9 118 aa3.58□□□□□ -1.84
VGLL3-202ENST00000398399 LCE1AQ5T7P2 110 aa3.55□□□□□ -1.84
VGLL3-202ENST00000398399 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
VGLL3-202ENST00000398399 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
VGLL3-202ENST00000398399 KRTAP9-4Q9BYQ2 154 aa3.54□□□□□ -1.84
VGLL3-202ENST00000398399 KRTAP9-7A8MTY7 169 aa3.49□□□□□ -1.85
VGLL3-202ENST00000398399 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
VGLL3-202ENST00000398399 LCE4AQ5TA78 99 aa3.45□□□□□ -1.86
VGLL3-202ENST00000398399 SYNE2Q8WXH0 6885 aaKnown RBP3.45□□□□□ -1.86
VGLL3-202ENST00000398399 RYR2Q92736 4967 aa3.41□□□□□ -1.86
VGLL3-202ENST00000398399 HERC1Q15751 4861 aa3.36□□□□□ -1.87
VGLL3-202ENST00000398399 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
VGLL3-202ENST00000398399 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
VGLL3-202ENST00000398399 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
VGLL3-202ENST00000398399 HERC2O95714 4834 aa3.35□□□□□ -1.87
VGLL3-202ENST00000398399 KRTAP20-1Q3LI63 56 aa3.33□□□□□ -1.88
VGLL3-202ENST00000398399 LCE2AQ5TA79 106 aaPredicted RBP3.3□□□□□ -1.88
VGLL3-202ENST00000398399 HYDINQ4G0P3 5121 aa3.27□□□□□ -1.89
VGLL3-202ENST00000398399 KRTAP6-3Q3LI67 103 aa3.22□□□□□ -1.89
VGLL3-202ENST00000398399 KRTAP9-6A0A140TA67 174 aa3.11□□□□□ -1.91
VGLL3-202ENST00000398399 HMCN2Q8NDA2 5059 aa3.11□□□□□ -1.91
VGLL3-202ENST00000398399 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
VGLL3-202ENST00000398399 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
VGLL3-202ENST00000398399 KIAA1109Q2LD37 5005 aa3.04□□□□□ -1.92
VGLL3-202ENST00000398399 KRTAP4-11Q9BYQ6 195 aa3.01□□□□□ -1.93
VGLL3-202ENST00000398399 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.94□□□□□ -1.94
VGLL3-202ENST00000398399 EPPK1P58107 5090 aaKnown RBP2.94□□□□□ -1.94
VGLL3-202ENST00000398399 RNF213Q63HN8 5207 aa2.9□□□□□ -1.94
VGLL3-202ENST00000398399 ABCA13Q86UQ4 5058 aa2.87□□□□□ -1.95
VGLL3-202ENST00000398399 MUC2Q02817 5179 aa2.8□□□□□ -1.96
VGLL3-202ENST00000398399 KRTAP5-9P26371 169 aa2.79□□□□□ -1.96
VGLL3-202ENST00000398399 FSIP2Q5CZC0 6907 aa2.77□□□□□ -1.97
VGLL3-202ENST00000398399 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
VGLL3-202ENST00000398399 FAT4Q6V0I7 4981 aa2.76□□□□□ -1.97
VGLL3-202ENST00000398399 UBR4Q5T4S7 5183 aa2.76□□□□□ -1.97
VGLL3-202ENST00000398399 KRTAP20-2Q3LI61 65 aa2.71□□□□□ -1.97
VGLL3-202ENST00000398399 KMT2DO14686 5537 aa2.69□□□□□ -1.98
VGLL3-202ENST00000398399 KRTAP4-6Q9BYQ5 205 aa2.65□□□□□ -1.98
VGLL3-202ENST00000398399 KRTAP5-4Q6L8H1 288 aa2.62□□□□□ -1.99
VGLL3-202ENST00000398399 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
VGLL3-202ENST00000398399 MDN1Q9NU22 5596 aa2.44□□□□□ -2.02
VGLL3-202ENST00000398399 NEBP20929 6669 aa2.41□□□□□ -2.02
VGLL3-202ENST00000398399 FCGBPQ9Y6R7 5405 aaPredicted RBP2.38□□□□□ -2.03
VGLL3-202ENST00000398399 KRTAP4-12Q9BQ66 201 aa2.38□□□□□ -2.03
VGLL3-202ENST00000398399 KRTAP4-2Q9BYR5 136 aa2.38□□□□□ -2.03
VGLL3-202ENST00000398399 USH2AO75445 5202 aa2.29□□□□□ -2.04
VGLL3-202ENST00000398399 KRTAP5-3Q6L8H2 238 aa2.25□□□□□ -2.05
VGLL3-202ENST00000398399 OBSCNQ5VST9 7968 aa2.22□□□□□ -2.05
VGLL3-202ENST00000398399 SSPOA2VEC9 5147 aa2.21□□□□□ -2.06
VGLL3-202ENST00000398399 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
VGLL3-202ENST00000398399 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
VGLL3-202ENST00000398399 DSTQ03001 7570 aaKnown RBP2.15□□□□□ -2.06
VGLL3-202ENST00000398399 MUC12Q9UKN1 5478 aa2.1□□□□□ -2.07
VGLL3-202ENST00000398399 MUC5BQ9HC84 5762 aaPredicted RBP2.04□□□□□ -2.08
VGLL3-202ENST00000398399 HMCN1Q96RW7 5635 aa2.01□□□□□ -2.09
VGLL3-202ENST00000398399 KRTAP5-2Q701N4 177 aa1.97□□□□□ -2.09
VGLL3-202ENST00000398399 MACF1Q9UPN3 7388 aaKnown RBP1.92□□□□□ -2.1
VGLL3-202ENST00000398399 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
VGLL3-202ENST00000398399 GPR98Q8WXG9 6306 aa1.91□□□□□ -2.1
VGLL3-202ENST00000398399 KRTAP5-1Q6L8H4 278 aa1.84□□□□□ -2.11
VGLL3-202ENST00000398399 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.12
VGLL3-202ENST00000398399 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.12
VGLL3-202ENST00000398399 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
VGLL3-202ENST00000398399 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
VGLL3-202ENST00000398399 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
VGLL3-202ENST00000398399 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
VGLL3-202ENST00000398399 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.72□□□□□ -2.13
VGLL3-202ENST00000398399 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
VGLL3-202ENST00000398399 KRTAP5-7Q6L8G8 165 aa1.3□□□□□ -2.2
VGLL3-202ENST00000398399 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 147.5 ms