RNA–Protein interactions for RNA: ENST00000396872.7

SLC29A4-202, Transcript of solute carrier family 29 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC29A4, Length 5,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC29A4-202ENST00000396872 PRM1P04553 51 aa5.76□□□□□ -1.49
SLC29A4-202ENST00000396872 MT1MQ8N339 61 aa5.73□□□□□ -1.49
SLC29A4-202ENST00000396872 MUC2Q02817 5179 aa5.72□□□□□ -1.49
SLC29A4-202ENST00000396872 HMCN2Q8NDA2 5059 aa5.7□□□□□ -1.5
SLC29A4-202ENST00000396872 FSIP2Q5CZC0 6907 aa5.66□□□□□ -1.5
SLC29A4-202ENST00000396872 RNF213Q63HN8 5207 aa5.62□□□□□ -1.51
SLC29A4-202ENST00000396872 KRTAP19-7Q3SYF9 63 aa5.61□□□□□ -1.51
SLC29A4-202ENST00000396872 FAT4Q6V0I7 4981 aa5.6□□□□□ -1.51
SLC29A4-202ENST00000396872 KRTAP2-3P0C7H8 128 aa5.56□□□□□ -1.52
SLC29A4-202ENST00000396872 KRTAP2-4Q9BYR9 128 aa5.56□□□□□ -1.52
SLC29A4-202ENST00000396872 KRTAP2-1Q9BYU5 128 aa5.56□□□□□ -1.52
SLC29A4-202ENST00000396872 LCE2AQ5TA79 106 aaPredicted RBP5.55□□□□□ -1.52
SLC29A4-202ENST00000396872 KRTAP4-9Q9BYQ8 210 aa5.55□□□□□ -1.52
SLC29A4-202ENST00000396872 MT3P25713 68 aa5.48□□□□□ -1.53
SLC29A4-202ENST00000396872 KRTAP19-6Q3LI70 58 aa5.46□□□□□ -1.53
SLC29A4-202ENST00000396872 KRTAP9-6A8MVA2 160 aa5.46□□□□□ -1.54
SLC29A4-202ENST00000396872 LCE2DQ5TA82 110 aaPredicted RBP5.38□□□□□ -1.55
SLC29A4-202ENST00000396872 SYNE2Q8WXH0 6885 aaKnown RBP5.32□□□□□ -1.56
SLC29A4-202ENST00000396872 MT4P47944 62 aa5.32□□□□□ -1.56
SLC29A4-202ENST00000396872 KRTAP9-2Q9BYQ4 174 aa5.3□□□□□ -1.56
SLC29A4-202ENST00000396872 OBSCNQ5VST9 7968 aa5.3□□□□□ -1.56
SLC29A4-202ENST00000396872 MT1AP04731 61 aa5.29□□□□□ -1.56
SLC29A4-202ENST00000396872 LCE1BQ5T7P3 118 aa5.25□□□□□ -1.57
SLC29A4-202ENST00000396872 LCE1DQ5T752 114 aa5.23□□□□□ -1.57
SLC29A4-202ENST00000396872 FCGBPQ9Y6R7 5405 aaPredicted RBP5.16□□□□□ -1.58
SLC29A4-202ENST00000396872 KRTAP6-1Q3LI64 71 aa5.13□□□□□ -1.59
SLC29A4-202ENST00000396872 KRTAP6-2Q3LI66 62 aa5.09□□□□□ -1.59
SLC29A4-202ENST00000396872 KRTAP9-7A8MTY7 169 aa5.06□□□□□ -1.6
SLC29A4-202ENST00000396872 KMT2DO14686 5537 aa4.99□□□□□ -1.61
SLC29A4-202ENST00000396872 KRTAP9-6A0A140TA67 174 aa4.97□□□□□ -1.61
SLC29A4-202ENST00000396872 USH2AO75445 5202 aa4.97□□□□□ -1.61
SLC29A4-202ENST00000396872 DSTQ03001 7570 aaKnown RBP4.95□□□□□ -1.62
SLC29A4-202ENST00000396872 LCE5AQ5TCM9 118 aa4.92□□□□□ -1.62
SLC29A4-202ENST00000396872 KRTAP9-4Q9BYQ2 154 aa4.87□□□□□ -1.63
SLC29A4-202ENST00000396872 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
SLC29A4-202ENST00000396872 KRTAP6-3Q3LI67 103 aa4.78□□□□□ -1.64
SLC29A4-202ENST00000396872 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.66□□□□□ -1.66
SLC29A4-202ENST00000396872 KRTAP2-2Q9BYT5 123 aa4.57□□□□□ -1.68
SLC29A4-202ENST00000396872 MUC12Q9UKN1 5478 aa4.53□□□□□ -1.68
SLC29A4-202ENST00000396872 KRTAP20-1Q3LI63 56 aa4.52□□□□□ -1.69
SLC29A4-202ENST00000396872 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
SLC29A4-202ENST00000396872 MACF1Q9UPN3 7388 aaKnown RBP4.43□□□□□ -1.7
SLC29A4-202ENST00000396872 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
SLC29A4-202ENST00000396872 KRTAP5-9P26371 169 aa4.33□□□□□ -1.72
SLC29A4-202ENST00000396872 MUC19Q7Z5P9 8384 aa4.32□□□□□ -1.72
SLC29A4-202ENST00000396872 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
SLC29A4-202ENST00000396872 LCE1CQ5T751 118 aa4.28□□□□□ -1.72
SLC29A4-202ENST00000396872 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
SLC29A4-202ENST00000396872 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
SLC29A4-202ENST00000396872 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
SLC29A4-202ENST00000396872 KRTAP4-6Q9BYQ5 205 aa4.07□□□□□ -1.76
SLC29A4-202ENST00000396872 NEBP20929 6669 aa4.06□□□□□ -1.76
SLC29A4-202ENST00000396872 MDN1Q9NU22 5596 aa4.06□□□□□ -1.76
SLC29A4-202ENST00000396872 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
SLC29A4-202ENST00000396872 KRTAP4-4Q9BYR3 166 aa3.84□□□□□ -1.79
SLC29A4-202ENST00000396872 KRTAP9-9Q9BYP9 154 aa3.75□□□□□ -1.81
SLC29A4-202ENST00000396872 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
SLC29A4-202ENST00000396872 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
SLC29A4-202ENST00000396872 GPR98Q8WXG9 6306 aa3.64□□□□□ -1.83
SLC29A4-202ENST00000396872 KRTAP5-4Q6L8H1 288 aa3.6□□□□□ -1.83
SLC29A4-202ENST00000396872 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
SLC29A4-202ENST00000396872 HMCN1Q96RW7 5635 aa3.35□□□□□ -1.87
SLC29A4-202ENST00000396872 KRTAP5-3Q6L8H2 238 aa3.2□□□□□ -1.9
SLC29A4-202ENST00000396872 KRTAP5-10Q6L8G5 202 aa3.16□□□□□ -1.9
SLC29A4-202ENST00000396872 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
SLC29A4-202ENST00000396872 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
SLC29A4-202ENST00000396872 KRTAP5-8O75690 187 aa2.9□□□□□ -1.94
SLC29A4-202ENST00000396872 KRTAP5-1Q6L8H4 278 aa2.74□□□□□ -1.97
SLC29A4-202ENST00000396872 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
SLC29A4-202ENST00000396872 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
SLC29A4-202ENST00000396872 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
SLC29A4-202ENST00000396872 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
SLC29A4-202ENST00000396872 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
SLC29A4-202ENST00000396872 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.47□□□□□ -2.01
SLC29A4-202ENST00000396872 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
SLC29A4-202ENST00000396872 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
SLC29A4-202ENST00000396872 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms